RNA–Protein interactions for RNA: ENST00000506587.5

PGM3-205, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-205ENST00000506587 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
PGM3-205ENST00000506587 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
PGM3-205ENST00000506587 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
PGM3-205ENST00000506587 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
PGM3-205ENST00000506587 ABCC9O60706 1549 aa19.14■□□□□ 0.65
PGM3-205ENST00000506587 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
PGM3-205ENST00000506587 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
PGM3-205ENST00000506587 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
PGM3-205ENST00000506587 NACADO15069 1562 aa18.74■□□□□ 0.59
PGM3-205ENST00000506587 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
PGM3-205ENST00000506587 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
PGM3-205ENST00000506587 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
PGM3-205ENST00000506587 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
PGM3-205ENST00000506587 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
PGM3-205ENST00000506587 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
PGM3-205ENST00000506587 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
PGM3-205ENST00000506587 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
PGM3-205ENST00000506587 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
PGM3-205ENST00000506587 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
PGM3-205ENST00000506587 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
PGM3-205ENST00000506587 WIZO95785 1651 aa17.75■□□□□ 0.43
PGM3-205ENST00000506587 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
PGM3-205ENST00000506587 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
PGM3-205ENST00000506587 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
PGM3-205ENST00000506587 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
PGM3-205ENST00000506587 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
PGM3-205ENST00000506587 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
PGM3-205ENST00000506587 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
PGM3-205ENST00000506587 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
PGM3-205ENST00000506587 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
PGM3-205ENST00000506587 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
PGM3-205ENST00000506587 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
PGM3-205ENST00000506587 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
PGM3-205ENST00000506587 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
PGM3-205ENST00000506587 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
PGM3-205ENST00000506587 CFTRP13569 1480 aa16.93■□□□□ 0.3
PGM3-205ENST00000506587 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
PGM3-205ENST00000506587 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
PGM3-205ENST00000506587 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
PGM3-205ENST00000506587 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
PGM3-205ENST00000506587 NESP48681 1621 aa16.81■□□□□ 0.28
PGM3-205ENST00000506587 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
PGM3-205ENST00000506587 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
PGM3-205ENST00000506587 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
PGM3-205ENST00000506587 LOC105371045A0A1W2PR82 267 aa16.71■□□□□ 0.27
PGM3-205ENST00000506587 CUX1P39880 1505 aa16.7■□□□□ 0.26
PGM3-205ENST00000506587 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
PGM3-205ENST00000506587 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
PGM3-205ENST00000506587 SOGA1O94964 1423 aa16.67■□□□□ 0.26
PGM3-205ENST00000506587 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
PGM3-205ENST00000506587 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
PGM3-205ENST00000506587 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
PGM3-205ENST00000506587 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
PGM3-205ENST00000506587 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
PGM3-205ENST00000506587 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
PGM3-205ENST00000506587 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.24
PGM3-205ENST00000506587 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
PGM3-205ENST00000506587 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
PGM3-205ENST00000506587 EEA1Q15075 1411 aa16.52■□□□□ 0.24
PGM3-205ENST00000506587 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
PGM3-205ENST00000506587 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
PGM3-205ENST00000506587 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
PGM3-205ENST00000506587 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
PGM3-205ENST00000506587 CUX2O14529 1486 aa16.4■□□□□ 0.22
PGM3-205ENST00000506587 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
PGM3-205ENST00000506587 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
PGM3-205ENST00000506587 KIF21BO75037 1637 aa16.36■□□□□ 0.21
PGM3-205ENST00000506587 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
PGM3-205ENST00000506587 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
PGM3-205ENST00000506587 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
PGM3-205ENST00000506587 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
PGM3-205ENST00000506587 WDR62O43379 1518 aa16.32■□□□□ 0.2
PGM3-205ENST00000506587 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
PGM3-205ENST00000506587 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
PGM3-205ENST00000506587 PRXQ9BXM0 1461 aa16.3■□□□□ 0.2
PGM3-205ENST00000506587 IGF1RP08069 1367 aa16.29■□□□□ 0.2
PGM3-205ENST00000506587 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
PGM3-205ENST00000506587 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
PGM3-205ENST00000506587 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
PGM3-205ENST00000506587 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
PGM3-205ENST00000506587 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
PGM3-205ENST00000506587 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
PGM3-205ENST00000506587 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
PGM3-205ENST00000506587 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
PGM3-205ENST00000506587 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
PGM3-205ENST00000506587 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.189e-6■□□□□ 10.2
PGM3-205ENST00000506587 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
PGM3-205ENST00000506587 CUL7Q14999 1698 aa16.14■□□□□ 0.17
PGM3-205ENST00000506587 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
PGM3-205ENST00000506587 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
PGM3-205ENST00000506587 CLIP1P30622 1438 aa16.09■□□□□ 0.17
PGM3-205ENST00000506587 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
PGM3-205ENST00000506587 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
PGM3-205ENST00000506587 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
PGM3-205ENST00000506587 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
PGM3-205ENST00000506587 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
PGM3-205ENST00000506587 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
PGM3-205ENST00000506587 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
PGM3-205ENST00000506587 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
PGM3-205ENST00000506587 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms