RNA–Protein interactions for RNA: ENST00000517599.5

NDRG1-204, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,918 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-204ENST00000517599 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
NDRG1-204ENST00000517599 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
NDRG1-204ENST00000517599 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
NDRG1-204ENST00000517599 SHROOM4Q9ULL8 1493 aa21.7■■□□□ 1.06
NDRG1-204ENST00000517599 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1.01
NDRG1-204ENST00000517599 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
NDRG1-204ENST00000517599 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
NDRG1-204ENST00000517599 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
NDRG1-204ENST00000517599 NACADO15069 1562 aa20.51■□□□□ 0.87
NDRG1-204ENST00000517599 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
NDRG1-204ENST00000517599 ABCC9O60706 1549 aa20.48■□□□□ 0.87
NDRG1-204ENST00000517599 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
NDRG1-204ENST00000517599 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
NDRG1-204ENST00000517599 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
NDRG1-204ENST00000517599 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
NDRG1-204ENST00000517599 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.78
NDRG1-204ENST00000517599 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
NDRG1-204ENST00000517599 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
NDRG1-204ENST00000517599 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
NDRG1-204ENST00000517599 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
NDRG1-204ENST00000517599 WIZO95785 1651 aa19.73■□□□□ 0.75
NDRG1-204ENST00000517599 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
NDRG1-204ENST00000517599 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
NDRG1-204ENST00000517599 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
NDRG1-204ENST00000517599 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
NDRG1-204ENST00000517599 HRCP23327 699 aa19.57■□□□□ 0.72
NDRG1-204ENST00000517599 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
NDRG1-204ENST00000517599 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
NDRG1-204ENST00000517599 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
NDRG1-204ENST00000517599 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
NDRG1-204ENST00000517599 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.77e-17■□□□□ 9
NDRG1-204ENST00000517599 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
NDRG1-204ENST00000517599 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
NDRG1-204ENST00000517599 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
NDRG1-204ENST00000517599 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
NDRG1-204ENST00000517599 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
NDRG1-204ENST00000517599 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
NDRG1-204ENST00000517599 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
NDRG1-204ENST00000517599 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
NDRG1-204ENST00000517599 EEA1Q15075 1411 aa19.07■□□□□ 0.64
NDRG1-204ENST00000517599 SOGA1O94964 1423 aa19■□□□□ 0.63
NDRG1-204ENST00000517599 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
NDRG1-204ENST00000517599 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
NDRG1-204ENST00000517599 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
NDRG1-204ENST00000517599 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
NDRG1-204ENST00000517599 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
NDRG1-204ENST00000517599 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
NDRG1-204ENST00000517599 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
NDRG1-204ENST00000517599 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
NDRG1-204ENST00000517599 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
NDRG1-204ENST00000517599 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
NDRG1-204ENST00000517599 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
NDRG1-204ENST00000517599 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
NDRG1-204ENST00000517599 KIF21BO75037 1637 aa18.78■□□□□ 0.6
NDRG1-204ENST00000517599 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
NDRG1-204ENST00000517599 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
NDRG1-204ENST00000517599 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
NDRG1-204ENST00000517599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
NDRG1-204ENST00000517599 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
NDRG1-204ENST00000517599 CFTRP13569 1480 aa18.64■□□□□ 0.58
NDRG1-204ENST00000517599 MYT1Q01538 1121 aa18.62■□□□□ 0.57
NDRG1-204ENST00000517599 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
NDRG1-204ENST00000517599 RANGAP1P46060 587 aaPredicted RBP18.58■□□□□ 0.56
NDRG1-204ENST00000517599 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
NDRG1-204ENST00000517599 CUX1P39880 1505 aa18.54■□□□□ 0.56
NDRG1-204ENST00000517599 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
NDRG1-204ENST00000517599 CLIP1P30622 1438 aa18.5■□□□□ 0.55
NDRG1-204ENST00000517599 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
NDRG1-204ENST00000517599 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
NDRG1-204ENST00000517599 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
NDRG1-204ENST00000517599 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
NDRG1-204ENST00000517599 VPS8Q8N3P4 1428 aa18.42■□□□□ 0.54
NDRG1-204ENST00000517599 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
NDRG1-204ENST00000517599 APLP2Q06481 763 aa18.35■□□□□ 0.53
NDRG1-204ENST00000517599 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
NDRG1-204ENST00000517599 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
NDRG1-204ENST00000517599 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
NDRG1-204ENST00000517599 ARAP1Q96P48 1450 aa18.23■□□□□ 0.51
NDRG1-204ENST00000517599 DNMBPQ6XZF7 1577 aa18.22■□□□□ 0.51
NDRG1-204ENST00000517599 CUX2O14529 1486 aa18.22■□□□□ 0.51
NDRG1-204ENST00000517599 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
NDRG1-204ENST00000517599 IGF1RP08069 1367 aa18.17■□□□□ 0.5
NDRG1-204ENST00000517599 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
NDRG1-204ENST00000517599 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
NDRG1-204ENST00000517599 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
NDRG1-204ENST00000517599 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
NDRG1-204ENST00000517599 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
NDRG1-204ENST00000517599 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
NDRG1-204ENST00000517599 CUL7Q14999 1698 aa18.07■□□□□ 0.48
NDRG1-204ENST00000517599 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
NDRG1-204ENST00000517599 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
NDRG1-204ENST00000517599 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
NDRG1-204ENST00000517599 NESP48681 1621 aa18.04■□□□□ 0.48
NDRG1-204ENST00000517599 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
NDRG1-204ENST00000517599 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
NDRG1-204ENST00000517599 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
NDRG1-204ENST00000517599 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
NDRG1-204ENST00000517599 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
NDRG1-204ENST00000517599 P3H3Q8IVL6 736 aa17.97■□□□□ 0.47
NDRG1-204ENST00000517599 EFCAB5A4FU69 1503 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms