RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
SEC24D-201ENST00000280551 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
SEC24D-201ENST00000280551 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
SEC24D-201ENST00000280551 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
SEC24D-201ENST00000280551 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
SEC24D-201ENST00000280551 NACADO15069 1562 aa18.99■□□□□ 0.63
SEC24D-201ENST00000280551 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
SEC24D-201ENST00000280551 ABCC9O60706 1549 aa18.68■□□□□ 0.58
SEC24D-201ENST00000280551 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
SEC24D-201ENST00000280551 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
SEC24D-201ENST00000280551 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
SEC24D-201ENST00000280551 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
SEC24D-201ENST00000280551 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.51
SEC24D-201ENST00000280551 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
SEC24D-201ENST00000280551 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
SEC24D-201ENST00000280551 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
SEC24D-201ENST00000280551 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
SEC24D-201ENST00000280551 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
SEC24D-201ENST00000280551 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
SEC24D-201ENST00000280551 WIZO95785 1651 aa17.92■□□□□ 0.46
SEC24D-201ENST00000280551 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
SEC24D-201ENST00000280551 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
SEC24D-201ENST00000280551 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.44
SEC24D-201ENST00000280551 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
SEC24D-201ENST00000280551 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
SEC24D-201ENST00000280551 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
SEC24D-201ENST00000280551 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
SEC24D-201ENST00000280551 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
SEC24D-201ENST00000280551 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
SEC24D-201ENST00000280551 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
SEC24D-201ENST00000280551 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
SEC24D-201ENST00000280551 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
SEC24D-201ENST00000280551 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
SEC24D-201ENST00000280551 BIVM-ERCC5R4GMW8 1640 aa17.17■□□□□ 0.34
SEC24D-201ENST00000280551 CFTRP13569 1480 aa17.09■□□□□ 0.33
SEC24D-201ENST00000280551 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
SEC24D-201ENST00000280551 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
SEC24D-201ENST00000280551 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
SEC24D-201ENST00000280551 EEA1Q15075 1411 aa16.95■□□□□ 0.3
SEC24D-201ENST00000280551 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
SEC24D-201ENST00000280551 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
SEC24D-201ENST00000280551 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
SEC24D-201ENST00000280551 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SEC24D-201ENST00000280551 CUX1P39880 1505 aa16.87■□□□□ 0.29
SEC24D-201ENST00000280551 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
SEC24D-201ENST00000280551 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
SEC24D-201ENST00000280551 SOGA1O94964 1423 aa16.74■□□□□ 0.27
SEC24D-201ENST00000280551 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
SEC24D-201ENST00000280551 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
SEC24D-201ENST00000280551 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
SEC24D-201ENST00000280551 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
SEC24D-201ENST00000280551 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
SEC24D-201ENST00000280551 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
SEC24D-201ENST00000280551 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
SEC24D-201ENST00000280551 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
SEC24D-201ENST00000280551 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
SEC24D-201ENST00000280551 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
SEC24D-201ENST00000280551 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
SEC24D-201ENST00000280551 NESP48681 1621 aa16.57■□□□□ 0.24
SEC24D-201ENST00000280551 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
SEC24D-201ENST00000280551 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
SEC24D-201ENST00000280551 ABCA5Q8WWZ7 1642 aa16.54■□□□□ 0.24
SEC24D-201ENST00000280551 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
SEC24D-201ENST00000280551 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
SEC24D-201ENST00000280551 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
SEC24D-201ENST00000280551 CUL7Q14999 1698 aa16.5■□□□□ 0.23
SEC24D-201ENST00000280551 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
SEC24D-201ENST00000280551 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
SEC24D-201ENST00000280551 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
SEC24D-201ENST00000280551 WDR62O43379 1518 aa16.45■□□□□ 0.22
SEC24D-201ENST00000280551 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
SEC24D-201ENST00000280551 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
SEC24D-201ENST00000280551 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
SEC24D-201ENST00000280551 CTTNBP2Q8WZ74 1663 aa16.38■□□□□ 0.21
SEC24D-201ENST00000280551 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
SEC24D-201ENST00000280551 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
SEC24D-201ENST00000280551 IGF1RP08069 1367 aa16.36■□□□□ 0.21
SEC24D-201ENST00000280551 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
SEC24D-201ENST00000280551 CUX2O14529 1486 aa16.35■□□□□ 0.21
SEC24D-201ENST00000280551 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.21
SEC24D-201ENST00000280551 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
SEC24D-201ENST00000280551 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
SEC24D-201ENST00000280551 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
SEC24D-201ENST00000280551 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
SEC24D-201ENST00000280551 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
SEC24D-201ENST00000280551 CLIP1P30622 1438 aa16.23■□□□□ 0.19
SEC24D-201ENST00000280551 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
SEC24D-201ENST00000280551 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
SEC24D-201ENST00000280551 EFCAB5A4FU69 1503 aa16.21■□□□□ 0.19
SEC24D-201ENST00000280551 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
SEC24D-201ENST00000280551 ARHGAP35Q9NRY4 1499 aa16.19■□□□□ 0.18
SEC24D-201ENST00000280551 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
SEC24D-201ENST00000280551 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
SEC24D-201ENST00000280551 HRCP23327 699 aa16.18■□□□□ 0.18
SEC24D-201ENST00000280551 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
SEC24D-201ENST00000280551 CFAP43Q8NDM7 1665 aa16.16■□□□□ 0.18
SEC24D-201ENST00000280551 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
SEC24D-201ENST00000280551 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■■■ 35.6
SEC24D-201ENST00000280551 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
SEC24D-201ENST00000280551 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms