RNA–Protein interactions for RNA: ENST00000505470.5

PGM3-204, Transcript of phosphoglucomutase 3, humanhuman

TSL 4

Gene PGM3, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-204ENST00000505470 NISCHQ9Y2I1 1504 aa28.86■■■□□ 2.21
PGM3-204ENST00000505470 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
PGM3-204ENST00000505470 ABCC9O60706 1549 aa25.58■■□□□ 1.69
PGM3-204ENST00000505470 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
PGM3-204ENST00000505470 NACADO15069 1562 aa24.32■■□□□ 1.48
PGM3-204ENST00000505470 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
PGM3-204ENST00000505470 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
PGM3-204ENST00000505470 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
PGM3-204ENST00000505470 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
PGM3-204ENST00000505470 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
PGM3-204ENST00000505470 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
PGM3-204ENST00000505470 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
PGM3-204ENST00000505470 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
PGM3-204ENST00000505470 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
PGM3-204ENST00000505470 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
PGM3-204ENST00000505470 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
PGM3-204ENST00000505470 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
PGM3-204ENST00000505470 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
PGM3-204ENST00000505470 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
PGM3-204ENST00000505470 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
PGM3-204ENST00000505470 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
PGM3-204ENST00000505470 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
PGM3-204ENST00000505470 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
PGM3-204ENST00000505470 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
PGM3-204ENST00000505470 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
PGM3-204ENST00000505470 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
PGM3-204ENST00000505470 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
PGM3-204ENST00000505470 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
PGM3-204ENST00000505470 NESP48681 1621 aa22.04■■□□□ 1.12
PGM3-204ENST00000505470 WIZO95785 1651 aa21.98■■□□□ 1.11
PGM3-204ENST00000505470 CUX2O14529 1486 aa21.94■■□□□ 1.1
PGM3-204ENST00000505470 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
PGM3-204ENST00000505470 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
PGM3-204ENST00000505470 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
PGM3-204ENST00000505470 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
PGM3-204ENST00000505470 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
PGM3-204ENST00000505470 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
PGM3-204ENST00000505470 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
PGM3-204ENST00000505470 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
PGM3-204ENST00000505470 CFTRP13569 1480 aa21.59■■□□□ 1.05
PGM3-204ENST00000505470 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
PGM3-204ENST00000505470 FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
PGM3-204ENST00000505470 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
PGM3-204ENST00000505470 WDR62O43379 1518 aa21.52■■□□□ 1.04
PGM3-204ENST00000505470 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
PGM3-204ENST00000505470 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
PGM3-204ENST00000505470 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
PGM3-204ENST00000505470 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
PGM3-204ENST00000505470 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
PGM3-204ENST00000505470 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
PGM3-204ENST00000505470 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
PGM3-204ENST00000505470 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
PGM3-204ENST00000505470 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
PGM3-204ENST00000505470 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
PGM3-204ENST00000505470 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
PGM3-204ENST00000505470 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
PGM3-204ENST00000505470 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
PGM3-204ENST00000505470 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.949e-6■□□□□ 10.2
PGM3-204ENST00000505470 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
PGM3-204ENST00000505470 CUX1P39880 1505 aa20.88■□□□□ 0.93
PGM3-204ENST00000505470 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
PGM3-204ENST00000505470 SOGA1O94964 1423 aa20.87■□□□□ 0.93
PGM3-204ENST00000505470 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
PGM3-204ENST00000505470 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
PGM3-204ENST00000505470 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
PGM3-204ENST00000505470 FBLN2P98095 1184 aa20.73■□□□□ 0.91
PGM3-204ENST00000505470 CHD1O14646 1710 aa20.73■□□□□ 0.91
PGM3-204ENST00000505470 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
PGM3-204ENST00000505470 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
PGM3-204ENST00000505470 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
PGM3-204ENST00000505470 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
PGM3-204ENST00000505470 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
PGM3-204ENST00000505470 ARHGEF11O15085 1522 aa20.64■□□□□ 0.9
PGM3-204ENST00000505470 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
PGM3-204ENST00000505470 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
PGM3-204ENST00000505470 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
PGM3-204ENST00000505470 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
PGM3-204ENST00000505470 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
PGM3-204ENST00000505470 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
PGM3-204ENST00000505470 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
PGM3-204ENST00000505470 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
PGM3-204ENST00000505470 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
PGM3-204ENST00000505470 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
PGM3-204ENST00000505470 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
PGM3-204ENST00000505470 CLASP1Q7Z460 1538 aa20.52■□□□□ 0.87
PGM3-204ENST00000505470 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
PGM3-204ENST00000505470 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
PGM3-204ENST00000505470 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
PGM3-204ENST00000505470 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
PGM3-204ENST00000505470 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
PGM3-204ENST00000505470 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
PGM3-204ENST00000505470 NUP160Q12769 1436 aa20.32■□□□□ 0.84
PGM3-204ENST00000505470 CEP170Q5SW79 1584 aa20.31■□□□□ 0.84
PGM3-204ENST00000505470 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
PGM3-204ENST00000505470 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
PGM3-204ENST00000505470 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
PGM3-204ENST00000505470 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
PGM3-204ENST00000505470 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
PGM3-204ENST00000505470 IGF1RP08069 1367 aa20.19■□□□□ 0.82
PGM3-204ENST00000505470 CUL7Q14999 1698 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms