RNA–Protein interactions for RNA: ENST00000533377.1

GRINA-209, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

TSL 2

Gene GRINA, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-209ENST00000533377 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
GRINA-209ENST00000533377 CCDC180Q9P1Z9 1646 aa33.84■■■■□ 3.01
GRINA-209ENST00000533377 ABCC9O60706 1549 aa33.07■■■□□ 2.89
GRINA-209ENST00000533377 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
GRINA-209ENST00000533377 NACADO15069 1562 aa31.79■■■□□ 2.68
GRINA-209ENST00000533377 MYO15BQ96JP2 1530 aa31.6■■■□□ 2.65
GRINA-209ENST00000533377 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
GRINA-209ENST00000533377 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
GRINA-209ENST00000533377 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
GRINA-209ENST00000533377 UNC13AQ9UPW8 1703 aa31.18■■■□□ 2.58
GRINA-209ENST00000533377 BICRAQ9NZM4 1560 aa30.89■■■□□ 2.54
GRINA-209ENST00000533377 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
GRINA-209ENST00000533377 SCRIBQ14160 1630 aa30.72■■■□□ 2.51
GRINA-209ENST00000533377 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
GRINA-209ENST00000533377 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
GRINA-209ENST00000533377 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
GRINA-209ENST00000533377 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
GRINA-209ENST00000533377 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
GRINA-209ENST00000533377 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
GRINA-209ENST00000533377 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
GRINA-209ENST00000533377 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
GRINA-209ENST00000533377 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
GRINA-209ENST00000533377 ATAD2BQ9ULI0 1458 aa29.25■■■□□ 2.27
GRINA-209ENST00000533377 HMGXB3Q12766 1538 aa29.2■■■□□ 2.27
GRINA-209ENST00000533377 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
GRINA-209ENST00000533377 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
GRINA-209ENST00000533377 BAZ1BQ9UIG0 1483 aaKnown RBP29.02■■■□□ 2.24
GRINA-209ENST00000533377 WIZO95785 1651 aa28.8■■■□□ 2.2
GRINA-209ENST00000533377 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
GRINA-209ENST00000533377 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
GRINA-209ENST00000533377 NESP48681 1621 aa28.58■■■□□ 2.17
GRINA-209ENST00000533377 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
GRINA-209ENST00000533377 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
GRINA-209ENST00000533377 CUX2O14529 1486 aa28.4■■■□□ 2.14
GRINA-209ENST00000533377 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
GRINA-209ENST00000533377 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
GRINA-209ENST00000533377 KIF21AQ7Z4S6 1674 aa28.34■■■□□ 2.13
GRINA-209ENST00000533377 THOC2Q8NI27 1593 aaKnown RBP28.31■■■□□ 2.12
GRINA-209ENST00000533377 CFTRP13569 1480 aa28.22■■■□□ 2.11
GRINA-209ENST00000533377 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
GRINA-209ENST00000533377 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
GRINA-209ENST00000533377 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
GRINA-209ENST00000533377 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
GRINA-209ENST00000533377 FANCD2Q9BXW9 1451 aa28.07■■■□□ 2.08
GRINA-209ENST00000533377 WDR62O43379 1518 aa28.04■■■□□ 2.08
GRINA-209ENST00000533377 URB2Q14146 1524 aaKnown RBP27.81■■■□□ 2.04
GRINA-209ENST00000533377 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
GRINA-209ENST00000533377 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
GRINA-209ENST00000533377 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
GRINA-209ENST00000533377 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
GRINA-209ENST00000533377 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
GRINA-209ENST00000533377 IFT140Q96RY7 1462 aa27.51■■□□□ 1.99
GRINA-209ENST00000533377 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
GRINA-209ENST00000533377 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
GRINA-209ENST00000533377 CUX1P39880 1505 aa27.34■■□□□ 1.97
GRINA-209ENST00000533377 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
GRINA-209ENST00000533377 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
GRINA-209ENST00000533377 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
GRINA-209ENST00000533377 WDR97A6NE52 1622 aa27.24■■□□□ 1.95
GRINA-209ENST00000533377 SOGA1O94964 1423 aa27.2■■□□□ 1.94
GRINA-209ENST00000533377 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
GRINA-209ENST00000533377 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
GRINA-209ENST00000533377 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
GRINA-209ENST00000533377 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
GRINA-209ENST00000533377 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
GRINA-209ENST00000533377 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
GRINA-209ENST00000533377 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
GRINA-209ENST00000533377 TDRD9Q8NDG6 1382 aaKnown RBP27.03■■□□□ 1.92
GRINA-209ENST00000533377 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
GRINA-209ENST00000533377 CHD1O14646 1710 aa27.02■■□□□ 1.92
GRINA-209ENST00000533377 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
GRINA-209ENST00000533377 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
GRINA-209ENST00000533377 GRIN2BQ13224 1484 aa26.96■■□□□ 1.91
GRINA-209ENST00000533377 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.91
GRINA-209ENST00000533377 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
GRINA-209ENST00000533377 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
GRINA-209ENST00000533377 SYNJ2O15056 1496 aa26.82■■□□□ 1.88
GRINA-209ENST00000533377 FBLN2P98095 1184 aa26.75■■□□□ 1.87
GRINA-209ENST00000533377 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
GRINA-209ENST00000533377 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
GRINA-209ENST00000533377 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
GRINA-209ENST00000533377 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
GRINA-209ENST00000533377 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
GRINA-209ENST00000533377 ARHGEF11O15085 1522 aa26.71■■□□□ 1.87
GRINA-209ENST00000533377 CLASP1Q7Z460 1538 aa26.71■■□□□ 1.87
GRINA-209ENST00000533377 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
GRINA-209ENST00000533377 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
GRINA-209ENST00000533377 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
GRINA-209ENST00000533377 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
GRINA-209ENST00000533377 NUP160Q12769 1436 aa26.53■■□□□ 1.84
GRINA-209ENST00000533377 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
GRINA-209ENST00000533377 CEP170Q5SW79 1584 aa26.5■■□□□ 1.83
GRINA-209ENST00000533377 CUL7Q14999 1698 aa26.49■■□□□ 1.83
GRINA-209ENST00000533377 ARAP1Q96P48 1450 aa26.48■■□□□ 1.83
GRINA-209ENST00000533377 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
GRINA-209ENST00000533377 IGF1RP08069 1367 aa26.4■■□□□ 1.82
GRINA-209ENST00000533377 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
GRINA-209ENST00000533377 CYB5RLQ6IPT4 315 aa26.33■■□□□ 1.81
GRINA-209ENST00000533377 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
GRINA-209ENST00000533377 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms