RNA–Protein interactions for RNA: ENST00000366615.8

COA6-203, Transcript of cytochrome c oxidase assembly factor 6, humanhuman

TSL 1 (best) BASIC

Gene COA6, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA6-203ENST00000366615 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
COA6-203ENST00000366615 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
COA6-203ENST00000366615 ABCC9O60706 1549 aa28.44■■■□□ 2.14
COA6-203ENST00000366615 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
COA6-203ENST00000366615 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
COA6-203ENST00000366615 NACADO15069 1562 aa27.39■■□□□ 1.97
COA6-203ENST00000366615 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.97
COA6-203ENST00000366615 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
COA6-203ENST00000366615 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
COA6-203ENST00000366615 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
COA6-203ENST00000366615 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
COA6-203ENST00000366615 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
COA6-203ENST00000366615 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
COA6-203ENST00000366615 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
COA6-203ENST00000366615 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
COA6-203ENST00000366615 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
COA6-203ENST00000366615 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
COA6-203ENST00000366615 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
COA6-203ENST00000366615 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
COA6-203ENST00000366615 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
COA6-203ENST00000366615 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
COA6-203ENST00000366615 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
COA6-203ENST00000366615 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
COA6-203ENST00000366615 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
COA6-203ENST00000366615 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
COA6-203ENST00000366615 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
COA6-203ENST00000366615 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.62
COA6-203ENST00000366615 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
COA6-203ENST00000366615 WIZO95785 1651 aa25.12■■□□□ 1.61
COA6-203ENST00000366615 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
COA6-203ENST00000366615 NESP48681 1621 aa24.66■■□□□ 1.54
COA6-203ENST00000366615 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
COA6-203ENST00000366615 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
COA6-203ENST00000366615 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
COA6-203ENST00000366615 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
COA6-203ENST00000366615 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
COA6-203ENST00000366615 CFTRP13569 1480 aa24.44■■□□□ 1.5
COA6-203ENST00000366615 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
COA6-203ENST00000366615 KIF21AQ7Z4S6 1674 aa24.35■■□□□ 1.49
COA6-203ENST00000366615 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
COA6-203ENST00000366615 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
COA6-203ENST00000366615 THOC2Q8NI27 1593 aaKnown RBP24.23■■□□□ 1.47
COA6-203ENST00000366615 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
COA6-203ENST00000366615 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
COA6-203ENST00000366615 CUX2O14529 1486 aa24.14■■□□□ 1.46
COA6-203ENST00000366615 WDR62O43379 1518 aa24.07■■□□□ 1.44
COA6-203ENST00000366615 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
COA6-203ENST00000366615 TOPBP1Q92547 1522 aa23.91■■□□□ 1.42
COA6-203ENST00000366615 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
COA6-203ENST00000366615 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
COA6-203ENST00000366615 CUX1P39880 1505 aa23.79■■□□□ 1.4
COA6-203ENST00000366615 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
COA6-203ENST00000366615 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
COA6-203ENST00000366615 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
COA6-203ENST00000366615 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
COA6-203ENST00000366615 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
COA6-203ENST00000366615 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
COA6-203ENST00000366615 SYNJ1O43426 1573 aa23.64■■□□□ 1.37
COA6-203ENST00000366615 SOGA1O94964 1423 aa23.63■■□□□ 1.37
COA6-203ENST00000366615 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
COA6-203ENST00000366615 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
COA6-203ENST00000366615 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
COA6-203ENST00000366615 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
COA6-203ENST00000366615 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.352e-6■■■□□ 15.2
COA6-203ENST00000366615 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
COA6-203ENST00000366615 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
COA6-203ENST00000366615 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
COA6-203ENST00000366615 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
COA6-203ENST00000366615 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
COA6-203ENST00000366615 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
COA6-203ENST00000366615 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
COA6-203ENST00000366615 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
COA6-203ENST00000366615 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
COA6-203ENST00000366615 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
COA6-203ENST00000366615 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
COA6-203ENST00000366615 FBLN2P98095 1184 aa23.2■■□□□ 1.3
COA6-203ENST00000366615 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
COA6-203ENST00000366615 CHD1O14646 1710 aa23.19■■□□□ 1.3
COA6-203ENST00000366615 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
COA6-203ENST00000366615 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
COA6-203ENST00000366615 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
COA6-203ENST00000366615 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
COA6-203ENST00000366615 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
COA6-203ENST00000366615 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
COA6-203ENST00000366615 IGF1RP08069 1367 aa23.09■■□□□ 1.29
COA6-203ENST00000366615 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
COA6-203ENST00000366615 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
COA6-203ENST00000366615 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
COA6-203ENST00000366615 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
COA6-203ENST00000366615 CUL7Q14999 1698 aa22.98■■□□□ 1.27
COA6-203ENST00000366615 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
COA6-203ENST00000366615 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
COA6-203ENST00000366615 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
COA6-203ENST00000366615 NUP160Q12769 1436 aa22.91■■□□□ 1.26
COA6-203ENST00000366615 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
COA6-203ENST00000366615 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
COA6-203ENST00000366615 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
COA6-203ENST00000366615 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
COA6-203ENST00000366615 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
COA6-203ENST00000366615 EEA1Q15075 1411 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms