RNA–Protein interactions for RNA: ENST00000485835.1

PSMD3-203, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 2,888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-203ENST00000485835 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
PSMD3-203ENST00000485835 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
PSMD3-203ENST00000485835 HRCP23327 699 aa18.27■□□□□ 0.51
PSMD3-203ENST00000485835 MYT1Q01538 1121 aa18.1■□□□□ 0.49
PSMD3-203ENST00000485835 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
PSMD3-203ENST00000485835 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
PSMD3-203ENST00000485835 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
PSMD3-203ENST00000485835 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
PSMD3-203ENST00000485835 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
PSMD3-203ENST00000485835 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.34
PSMD3-203ENST00000485835 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
PSMD3-203ENST00000485835 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
PSMD3-203ENST00000485835 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
PSMD3-203ENST00000485835 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
PSMD3-203ENST00000485835 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
PSMD3-203ENST00000485835 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
PSMD3-203ENST00000485835 GTF3C3Q9Y5Q9 886 aa16.78■□□□□ 0.28
PSMD3-203ENST00000485835 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
PSMD3-203ENST00000485835 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
PSMD3-203ENST00000485835 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
PSMD3-203ENST00000485835 SHROOM4Q9ULL8 1493 aa16.62■□□□□ 0.25
PSMD3-203ENST00000485835 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
PSMD3-203ENST00000485835 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
PSMD3-203ENST00000485835 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
PSMD3-203ENST00000485835 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
PSMD3-203ENST00000485835 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
PSMD3-203ENST00000485835 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
PSMD3-203ENST00000485835 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
PSMD3-203ENST00000485835 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
PSMD3-203ENST00000485835 APLP2Q06481 763 aa16.07■□□□□ 0.16
PSMD3-203ENST00000485835 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
PSMD3-203ENST00000485835 ZCCHC6Q5VYS8 1495 aaKnown RBP15.99■□□□□ 0.15
PSMD3-203ENST00000485835 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
PSMD3-203ENST00000485835 YTHDC1Q96MU7 727 aaKnown RBP15.97■□□□□ 0.15
PSMD3-203ENST00000485835 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
PSMD3-203ENST00000485835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
PSMD3-203ENST00000485835 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
PSMD3-203ENST00000485835 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
PSMD3-203ENST00000485835 MIER1Q8N108 512 aa15.81■□□□□ 0.12
PSMD3-203ENST00000485835 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
PSMD3-203ENST00000485835 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
PSMD3-203ENST00000485835 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
PSMD3-203ENST00000485835 MSH5O43196 834 aa15.46■□□□□ 0.07
PSMD3-203ENST00000485835 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
PSMD3-203ENST00000485835 UBE2Q2Q8WVN8 375 aa15.4■□□□□ 0.06
PSMD3-203ENST00000485835 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
PSMD3-203ENST00000485835 FANCIQ9NVI1 1328 aa15.38■□□□□ 0.05
PSMD3-203ENST00000485835 ABCC9O60706 1549 aa15.37■□□□□ 0.05
PSMD3-203ENST00000485835 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
PSMD3-203ENST00000485835 BCANQ96GW7 911 aa15.31■□□□□ 0.04
PSMD3-203ENST00000485835 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
PSMD3-203ENST00000485835 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
PSMD3-203ENST00000485835 FKBP8Q14318 412 aa15.27■□□□□ 0.04
PSMD3-203ENST00000485835 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
PSMD3-203ENST00000485835 NEFLP07196 543 aa15.15■□□□□ 0.02
PSMD3-203ENST00000485835 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
PSMD3-203ENST00000485835 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
PSMD3-203ENST00000485835 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
PSMD3-203ENST00000485835 ITGAEP38570 1179 aa15.09■□□□□ 0.01
PSMD3-203ENST00000485835 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
PSMD3-203ENST00000485835 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
PSMD3-203ENST00000485835 KCNH8Q96L42 1107 aa15.03■□□□□ -0
PSMD3-203ENST00000485835 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
PSMD3-203ENST00000485835 TNIKQ9UKE5 1360 aa14.99□□□□□ -0.01
PSMD3-203ENST00000485835 IL27Q8NEV9 243 aa14.98□□□□□ -0.01
PSMD3-203ENST00000485835 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
PSMD3-203ENST00000485835 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
PSMD3-203ENST00000485835 PKNOX2Q96KN3 472 aa14.96□□□□□ -0.01
PSMD3-203ENST00000485835 NOP58Q9Y2X3 529 aaKnown RBP14.95□□□□□ -0.02
PSMD3-203ENST00000485835 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
PSMD3-203ENST00000485835 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
PSMD3-203ENST00000485835 NBR1Q14596 966 aa14.91□□□□□ -0.02
PSMD3-203ENST00000485835 SLC24A1O60721 1099 aa14.88□□□□□ -0.03
PSMD3-203ENST00000485835 NACADO15069 1562 aa14.88□□□□□ -0.03
PSMD3-203ENST00000485835 RTN4Q9NQC3 1192 aaKnown RBP14.87□□□□□ -0.03
PSMD3-203ENST00000485835 RTL5Q5HYW3 569 aaPredicted RBP14.85□□□□□ -0.03
PSMD3-203ENST00000485835 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
PSMD3-203ENST00000485835 C11orf95C9JLR9 678 aaPredicted RBP14.82□□□□□ -0.04
PSMD3-203ENST00000485835 CCER2I3L3R5 266 aa14.82□□□□□ -0.04
PSMD3-203ENST00000485835 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
PSMD3-203ENST00000485835 TRIM52Q96A61 297 aa14.76□□□□□ -0.05
PSMD3-203ENST00000485835 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
PSMD3-203ENST00000485835 ABCC8Q09428 1581 aa14.76□□□□□ -0.05
PSMD3-203ENST00000485835 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
PSMD3-203ENST00000485835 EEA1Q15075 1411 aa14.75□□□□□ -0.05
PSMD3-203ENST00000485835 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
PSMD3-203ENST00000485835 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
PSMD3-203ENST00000485835 IPO9Q96P70 1041 aaKnown RBP14.71□□□□□ -0.06
PSMD3-203ENST00000485835 PPP1R15AO75807 674 aaPredicted RBP14.7□□□□□ -0.06
PSMD3-203ENST00000485835 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
PSMD3-203ENST00000485835 CUX2O14529 1486 aa14.69□□□□□ -0.06
PSMD3-203ENST00000485835 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
PSMD3-203ENST00000485835 DDX10Q13206 875 aaKnown RBP14.67□□□□□ -0.06
PSMD3-203ENST00000485835 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
PSMD3-203ENST00000485835 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
PSMD3-203ENST00000485835 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
PSMD3-203ENST00000485835 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
PSMD3-203ENST00000485835 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
PSMD3-203ENST00000485835 ANP32AP39687 249 aaKnown RBP14.65□□□□□ -0.06
PSMD3-203ENST00000485835 SOGA1O94964 1423 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms