RNA–Protein interactions for RNA: ENST00000513973.5

PGM3-212, Transcript of phosphoglucomutase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGM3, Length 6,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-212ENST00000513973 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
PGM3-212ENST00000513973 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
PGM3-212ENST00000513973 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
PGM3-212ENST00000513973 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
PGM3-212ENST00000513973 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.3
PGM3-212ENST00000513973 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
PGM3-212ENST00000513973 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
PGM3-212ENST00000513973 ABCC9O60706 1549 aa12.57□□□□□ -0.4
PGM3-212ENST00000513973 CHIC1Q5VXU3 224 aa12.55□□□□□ -0.4
PGM3-212ENST00000513973 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
PGM3-212ENST00000513973 NACADO15069 1562 aa12.33□□□□□ -0.44
PGM3-212ENST00000513973 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
PGM3-212ENST00000513973 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
PGM3-212ENST00000513973 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
PGM3-212ENST00000513973 FAM9AQ8IZU1 332 aaPredicted RBP12.26□□□□□ -0.45
PGM3-212ENST00000513973 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
PGM3-212ENST00000513973 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
PGM3-212ENST00000513973 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
PGM3-212ENST00000513973 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
PGM3-212ENST00000513973 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
PGM3-212ENST00000513973 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
PGM3-212ENST00000513973 MROH2BQ7Z745 1585 aa12.06□□□□□ -0.48
PGM3-212ENST00000513973 HRCP23327 699 aa12.03□□□□□ -0.48
PGM3-212ENST00000513973 WIZO95785 1651 aa12□□□□□ -0.49
PGM3-212ENST00000513973 TRIM26Q12899 539 aaPredicted RBP11.99□□□□□ -0.49
PGM3-212ENST00000513973 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
PGM3-212ENST00000513973 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
PGM3-212ENST00000513973 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
PGM3-212ENST00000513973 TOP2AP11388 1531 aaKnown RBP11.85□□□□□ -0.51
PGM3-212ENST00000513973 TTBK1Q5TCY1 1321 aaPredicted RBP11.83□□□□□ -0.52
PGM3-212ENST00000513973 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
PGM3-212ENST00000513973 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
PGM3-212ENST00000513973 ZEB1P37275 1124 aaPredicted RBP11.78□□□□□ -0.52
PGM3-212ENST00000513973 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
PGM3-212ENST00000513973 ABCC8Q09428 1581 aa11.75□□□□□ -0.53
PGM3-212ENST00000513973 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
PGM3-212ENST00000513973 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.53
PGM3-212ENST00000513973 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
PGM3-212ENST00000513973 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
PGM3-212ENST00000513973 APLP2Q06481 763 aa11.68□□□□□ -0.54
PGM3-212ENST00000513973 BICRAQ9NZM4 1560 aa11.66□□□□□ -0.54
PGM3-212ENST00000513973 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
PGM3-212ENST00000513973 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
PGM3-212ENST00000513973 SOGA1O94964 1423 aa11.63□□□□□ -0.55
PGM3-212ENST00000513973 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
PGM3-212ENST00000513973 EEA1Q15075 1411 aa11.6□□□□□ -0.55
PGM3-212ENST00000513973 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
PGM3-212ENST00000513973 CEP162Q5TB80 1403 aa11.58□□□□□ -0.56
PGM3-212ENST00000513973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
PGM3-212ENST00000513973 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
PGM3-212ENST00000513973 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
PGM3-212ENST00000513973 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
PGM3-212ENST00000513973 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
PGM3-212ENST00000513973 CEP164Q9UPV0 1460 aa11.49□□□□□ -0.57
PGM3-212ENST00000513973 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
PGM3-212ENST00000513973 CLIP1P30622 1438 aa11.44□□□□□ -0.58
PGM3-212ENST00000513973 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
PGM3-212ENST00000513973 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
PGM3-212ENST00000513973 ATP1B4Q9UN42 357 aaPredicted RBP11.37□□□□□ -0.59
PGM3-212ENST00000513973 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
PGM3-212ENST00000513973 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
PGM3-212ENST00000513973 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
PGM3-212ENST00000513973 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
PGM3-212ENST00000513973 KIF21BO75037 1637 aa11.34□□□□□ -0.59
PGM3-212ENST00000513973 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
PGM3-212ENST00000513973 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
PGM3-212ENST00000513973 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
PGM3-212ENST00000513973 ITGAEP38570 1179 aa11.28□□□□□ -0.6
PGM3-212ENST00000513973 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
PGM3-212ENST00000513973 DIEXFQ68CQ4 756 aaKnown RBP11.26□□□□□ -0.61
PGM3-212ENST00000513973 CFTRP13569 1480 aa11.26□□□□□ -0.61
PGM3-212ENST00000513973 CUX1P39880 1505 aa11.25□□□□□ -0.61
PGM3-212ENST00000513973 CUX2O14529 1486 aa11.25□□□□□ -0.61
PGM3-212ENST00000513973 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
PGM3-212ENST00000513973 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
PGM3-212ENST00000513973 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
PGM3-212ENST00000513973 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
PGM3-212ENST00000513973 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
PGM3-212ENST00000513973 ZNF316A6NFI3 1004 aaPredicted RBP11.18□□□□□ -0.62
PGM3-212ENST00000513973 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
PGM3-212ENST00000513973 FAM50AQ14320 339 aaKnown RBP11.16□□□□□ -0.62
PGM3-212ENST00000513973 PRXQ9BXM0 1461 aa11.16□□□□□ -0.62
PGM3-212ENST00000513973 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
PGM3-212ENST00000513973 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
PGM3-212ENST00000513973 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
PGM3-212ENST00000513973 ARAP1Q96P48 1450 aa11.12□□□□□ -0.63
PGM3-212ENST00000513973 IGF1RP08069 1367 aa11.11□□□□□ -0.63
PGM3-212ENST00000513973 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
PGM3-212ENST00000513973 RAD54L2Q9Y4B4 1467 aa11.07□□□□□ -0.64
PGM3-212ENST00000513973 NESP48681 1621 aa11.06□□□□□ -0.64
PGM3-212ENST00000513973 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
PGM3-212ENST00000513973 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
PGM3-212ENST00000513973 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
PGM3-212ENST00000513973 SCAF1Q9H7N4 1312 aaKnown RBP11.05□□□□□ -0.64
PGM3-212ENST00000513973 FHAD1B1AJZ9 1412 aa11.04□□□□□ -0.64
PGM3-212ENST00000513973 ACIN1Q9UKV3 1341 aaKnown RBP11.04□□□□□ -0.64
PGM3-212ENST00000513973 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
PGM3-212ENST00000513973 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.64
PGM3-212ENST00000513973 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
PGM3-212ENST00000513973 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms