RNA–Protein interactions for RNA: ENST00000283977.8

PGM3-201, Transcript of phosphoglucomutase 3, humanhuman

TSL 5 BASIC

Gene PGM3, Length 2,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-201ENST00000283977 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
PGM3-201ENST00000283977 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
PGM3-201ENST00000283977 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
PGM3-201ENST00000283977 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
PGM3-201ENST00000283977 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.47
PGM3-201ENST00000283977 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
PGM3-201ENST00000283977 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
PGM3-201ENST00000283977 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
PGM3-201ENST00000283977 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
PGM3-201ENST00000283977 ABCC9O60706 1549 aa23.33■■□□□ 1.32
PGM3-201ENST00000283977 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
PGM3-201ENST00000283977 NACADO15069 1562 aa23.2■■□□□ 1.3
PGM3-201ENST00000283977 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
PGM3-201ENST00000283977 RB1CC1Q8TDY2 1594 aa22.86■■□□□ 1.25
PGM3-201ENST00000283977 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
PGM3-201ENST00000283977 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
PGM3-201ENST00000283977 WIZO95785 1651 aa22.59■■□□□ 1.21
PGM3-201ENST00000283977 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
PGM3-201ENST00000283977 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.19
PGM3-201ENST00000283977 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
PGM3-201ENST00000283977 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
PGM3-201ENST00000283977 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
PGM3-201ENST00000283977 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
PGM3-201ENST00000283977 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
PGM3-201ENST00000283977 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
PGM3-201ENST00000283977 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
PGM3-201ENST00000283977 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
PGM3-201ENST00000283977 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
PGM3-201ENST00000283977 HRCP23327 699 aa22.15■■□□□ 1.14
PGM3-201ENST00000283977 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.14
PGM3-201ENST00000283977 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
PGM3-201ENST00000283977 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
PGM3-201ENST00000283977 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
PGM3-201ENST00000283977 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
PGM3-201ENST00000283977 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
PGM3-201ENST00000283977 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.09
PGM3-201ENST00000283977 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
PGM3-201ENST00000283977 SOGA1O94964 1423 aa21.73■■□□□ 1.07
PGM3-201ENST00000283977 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
PGM3-201ENST00000283977 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
PGM3-201ENST00000283977 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
PGM3-201ENST00000283977 EEA1Q15075 1411 aa21.61■■□□□ 1.05
PGM3-201ENST00000283977 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
PGM3-201ENST00000283977 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
PGM3-201ENST00000283977 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
PGM3-201ENST00000283977 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
PGM3-201ENST00000283977 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
PGM3-201ENST00000283977 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
PGM3-201ENST00000283977 GOLGA3Q08378 1498 aa21.43■■□□□ 1.02
PGM3-201ENST00000283977 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
PGM3-201ENST00000283977 ZEB1P37275 1124 aaPredicted RBP21.36■■□□□ 1.01
PGM3-201ENST00000283977 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
PGM3-201ENST00000283977 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
PGM3-201ENST00000283977 KIF21BO75037 1637 aa21.33■■□□□ 1.01
PGM3-201ENST00000283977 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
PGM3-201ENST00000283977 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
PGM3-201ENST00000283977 CFTRP13569 1480 aa21.23■□□□□ 0.99
PGM3-201ENST00000283977 RAPGEF2Q9Y4G8 1499 aa21.23■□□□□ 0.99
PGM3-201ENST00000283977 CUX1P39880 1505 aa21.19■□□□□ 0.98
PGM3-201ENST00000283977 CLIP1P30622 1438 aa21.16■□□□□ 0.98
PGM3-201ENST00000283977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
PGM3-201ENST00000283977 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
PGM3-201ENST00000283977 VPS8Q8N3P4 1428 aa21.06■□□□□ 0.96
PGM3-201ENST00000283977 ERICH3Q5RHP9 1530 aa21.05■□□□□ 0.96
PGM3-201ENST00000283977 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
PGM3-201ENST00000283977 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
PGM3-201ENST00000283977 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
PGM3-201ENST00000283977 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
PGM3-201ENST00000283977 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.95
PGM3-201ENST00000283977 KIF27Q86VH2 1401 aa21.01■□□□□ 0.95
PGM3-201ENST00000283977 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
PGM3-201ENST00000283977 APLP2Q06481 763 aa20.88■□□□□ 0.93
PGM3-201ENST00000283977 CUX2O14529 1486 aa20.86■□□□□ 0.93
PGM3-201ENST00000283977 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
PGM3-201ENST00000283977 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
PGM3-201ENST00000283977 IGF1RP08069 1367 aa20.81■□□□□ 0.92
PGM3-201ENST00000283977 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
PGM3-201ENST00000283977 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
PGM3-201ENST00000283977 NESP48681 1621 aa20.73■□□□□ 0.91
PGM3-201ENST00000283977 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
PGM3-201ENST00000283977 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
PGM3-201ENST00000283977 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
PGM3-201ENST00000283977 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
PGM3-201ENST00000283977 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
PGM3-201ENST00000283977 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
PGM3-201ENST00000283977 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
PGM3-201ENST00000283977 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
PGM3-201ENST00000283977 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
PGM3-201ENST00000283977 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
PGM3-201ENST00000283977 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
PGM3-201ENST00000283977 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
PGM3-201ENST00000283977 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
PGM3-201ENST00000283977 CUL7Q14999 1698 aa20.46■□□□□ 0.87
PGM3-201ENST00000283977 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
PGM3-201ENST00000283977 MAP3K1Q13233 1512 aa20.45■□□□□ 0.86
PGM3-201ENST00000283977 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
PGM3-201ENST00000283977 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
PGM3-201ENST00000283977 P3H3Q8IVL6 736 aa20.43■□□□□ 0.86
PGM3-201ENST00000283977 ZNF316A6NFI3 1004 aaPredicted RBP20.42■□□□□ 0.86
PGM3-201ENST00000283977 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms