RNA–Protein interactions for RNA: ENST00000477455.5

MTHFD2-206, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 3

Gene MTHFD2, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-206ENST00000477455 AEBP2Q6ZN18 517 aaPredicted RBP33.01■■■□□ 2.87
MTHFD2-206ENST00000477455 CHIC1Q5VXU3 224 aa31.85■■■□□ 2.69
MTHFD2-206ENST00000477455 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
MTHFD2-206ENST00000477455 PHF23Q9BUL5 403 aaPredicted RBP27.97■■■□□ 2.07
MTHFD2-206ENST00000477455 FOXD1Q16676 465 aa26.12■■□□□ 1.77
MTHFD2-206ENST00000477455 PLPPR3Q6T4P5 718 aa25.71■■□□□ 1.71
MTHFD2-206ENST00000477455 PPP6R1Q9UPN7 881 aa24.82■■□□□ 1.56
MTHFD2-206ENST00000477455 ADRA2BP18089 450 aa24.78■■□□□ 1.56
MTHFD2-206ENST00000477455 PIAS4Q8N2W9 510 aaPredicted RBP24.56■■□□□ 1.52
MTHFD2-206ENST00000477455 MSH5O43196 834 aa24.25■■□□□ 1.47
MTHFD2-206ENST00000477455 POTEDQ86YR6 584 aa22.78■■□□□ 1.24
MTHFD2-206ENST00000477455 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
MTHFD2-206ENST00000477455 MAPK8IP2Q13387 824 aaPredicted RBP22.6■■□□□ 1.21
MTHFD2-206ENST00000477455 PPP4R3CPQ6ZMV5 832 aa22.6■■□□□ 1.21
MTHFD2-206ENST00000477455 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
MTHFD2-206ENST00000477455 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
MTHFD2-206ENST00000477455 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
MTHFD2-206ENST00000477455 HOXD11P31277 338 aaPredicted RBP21.72■■□□□ 1.07
MTHFD2-206ENST00000477455 RNF216Q9NWF9 866 aaPredicted RBP21.72■■□□□ 1.07
MTHFD2-206ENST00000477455 KCNA4P22459 653 aa21.62■■□□□ 1.05
MTHFD2-206ENST00000477455 NPM3O75607 178 aaKnown RBP21.57■■□□□ 1.04
MTHFD2-206ENST00000477455 DCAF8L1A6NGE4 600 aa21.46■■□□□ 1.03
MTHFD2-206ENST00000477455 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
MTHFD2-206ENST00000477455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.91
MTHFD2-206ENST00000477455 RNF39Q9H2S5 420 aa20.73■□□□□ 0.91
MTHFD2-206ENST00000477455 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
MTHFD2-206ENST00000477455 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
MTHFD2-206ENST00000477455 C1QBPQ07021 282 aaKnown RBP20.46■□□□□ 0.87
MTHFD2-206ENST00000477455 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
MTHFD2-206ENST00000477455 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
MTHFD2-206ENST00000477455 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
MTHFD2-206ENST00000477455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
MTHFD2-206ENST00000477455 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
MTHFD2-206ENST00000477455 MYCNP04198 464 aaPredicted RBP19.95■□□□□ 0.78
MTHFD2-206ENST00000477455 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
MTHFD2-206ENST00000477455 ZBTB22O15209 634 aa19.88■□□□□ 0.77
MTHFD2-206ENST00000477455 CAPN15O75808 1086 aa19.86■□□□□ 0.77
MTHFD2-206ENST00000477455 SAMD1Q6SPF0 538 aaPredicted RBP19.86■□□□□ 0.77
MTHFD2-206ENST00000477455 APLP2Q06481 763 aa19.85■□□□□ 0.77
MTHFD2-206ENST00000477455 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
MTHFD2-206ENST00000477455 ZNF219Q9P2Y4 722 aaPredicted RBP19.64■□□□□ 0.73
MTHFD2-206ENST00000477455 DSG3P32926 999 aa19.59■□□□□ 0.73
MTHFD2-206ENST00000477455 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
MTHFD2-206ENST00000477455 ABCB7O75027 752 aa19.45■□□□□ 0.7
MTHFD2-206ENST00000477455 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
MTHFD2-206ENST00000477455 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
MTHFD2-206ENST00000477455 ATXN8OSP0DMR3 200 aa19.34■□□□□ 0.69
MTHFD2-206ENST00000477455 POLA2Q14181 598 aa19.25■□□□□ 0.67
MTHFD2-206ENST00000477455 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
MTHFD2-206ENST00000477455 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
MTHFD2-206ENST00000477455 FBLN2P98095 1184 aa18.67■□□□□ 0.58
MTHFD2-206ENST00000477455 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
MTHFD2-206ENST00000477455 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
MTHFD2-206ENST00000477455 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
MTHFD2-206ENST00000477455 SPDYE2BA6NHP3 402 aa18.34■□□□□ 0.53
MTHFD2-206ENST00000477455 SPDYE6P0CI01 402 aa18.34■□□□□ 0.53
MTHFD2-206ENST00000477455 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
MTHFD2-206ENST00000477455 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
MTHFD2-206ENST00000477455 REM2Q8IYK8 340 aaPredicted RBP18.2■□□□□ 0.5
MTHFD2-206ENST00000477455 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
MTHFD2-206ENST00000477455 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
MTHFD2-206ENST00000477455 PITPNM1O00562 1244 aa18■□□□□ 0.47
MTHFD2-206ENST00000477455 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
MTHFD2-206ENST00000477455 POTEHQ6S545 545 aa17.97■□□□□ 0.47
MTHFD2-206ENST00000477455 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
MTHFD2-206ENST00000477455 SPDYE1Q8NFV5 336 aaPredicted RBP17.91■□□□□ 0.46
MTHFD2-206ENST00000477455 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
MTHFD2-206ENST00000477455 PIP4P2Q8N4L2 257 aa17.76■□□□□ 0.43
MTHFD2-206ENST00000477455 FXR2P51116 673 aaKnown RBP eCLIP17.73■□□□□ 0.43
MTHFD2-206ENST00000477455 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
MTHFD2-206ENST00000477455 FKBP8Q14318 412 aa17.62■□□□□ 0.41
MTHFD2-206ENST00000477455 STAG3Q9UJ98 1225 aa17.6■□□□□ 0.41
MTHFD2-206ENST00000477455 PROM2Q8N271 834 aa17.58■□□□□ 0.4
MTHFD2-206ENST00000477455 PRKAR2AP13861 404 aaKnown RBP17.56■□□□□ 0.4
MTHFD2-206ENST00000477455 CHADLQ6NUI6 762 aa17.47■□□□□ 0.39
MTHFD2-206ENST00000477455 HAX1O00165 279 aa17.32■□□□□ 0.36
MTHFD2-206ENST00000477455 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
MTHFD2-206ENST00000477455 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
MTHFD2-206ENST00000477455 C19orf67A6NJJ6 358 aa17.14■□□□□ 0.33
MTHFD2-206ENST00000477455 EVX2Q03828 476 aa17.11■□□□□ 0.33
MTHFD2-206ENST00000477455 MIER1Q8N108 512 aa17.11■□□□□ 0.33
MTHFD2-206ENST00000477455 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
MTHFD2-206ENST00000477455 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
MTHFD2-206ENST00000477455 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
MTHFD2-206ENST00000477455 MNX1P50219 401 aaPredicted RBP17.07■□□□□ 0.32
MTHFD2-206ENST00000477455 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
MTHFD2-206ENST00000477455 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
MTHFD2-206ENST00000477455 CD44P16070 742 aaKnown RBP17.02■□□□□ 0.32
MTHFD2-206ENST00000477455 VASPP50552 380 aaPredicted RBP16.87■□□□□ 0.29
MTHFD2-206ENST00000477455 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
MTHFD2-206ENST00000477455 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
MTHFD2-206ENST00000477455 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
MTHFD2-206ENST00000477455 NISCHQ9Y2I1 1504 aa16.79■□□□□ 0.28
MTHFD2-206ENST00000477455 GABBR2O75899 941 aa16.77■□□□□ 0.28
MTHFD2-206ENST00000477455 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
MTHFD2-206ENST00000477455 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
MTHFD2-206ENST00000477455 RASEFQ8IZ41 740 aa16.71■□□□□ 0.27
MTHFD2-206ENST00000477455 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
MTHFD2-206ENST00000477455 CLCN6P51797 869 aa16.68■□□□□ 0.26
MTHFD2-206ENST00000477455 NUBP1P53384 320 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms