RNA–Protein interactions for RNA: ENST00000512866.5

PGM3-211, Transcript of phosphoglucomutase 3, humanhuman

TSL 1 (best) BASIC

Gene PGM3, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-211ENST00000512866 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
PGM3-211ENST00000512866 ABCC9O60706 1549 aa15.69■□□□□ 0.1
PGM3-211ENST00000512866 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
PGM3-211ENST00000512866 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
PGM3-211ENST00000512866 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
PGM3-211ENST00000512866 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
PGM3-211ENST00000512866 NACADO15069 1562 aa14.55□□□□□ -0.08
PGM3-211ENST00000512866 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
PGM3-211ENST00000512866 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
PGM3-211ENST00000512866 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
PGM3-211ENST00000512866 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
PGM3-211ENST00000512866 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
PGM3-211ENST00000512866 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
PGM3-211ENST00000512866 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
PGM3-211ENST00000512866 CUX2O14529 1486 aa14.19□□□□□ -0.14
PGM3-211ENST00000512866 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.17
PGM3-211ENST00000512866 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
PGM3-211ENST00000512866 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
PGM3-211ENST00000512866 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
PGM3-211ENST00000512866 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
PGM3-211ENST00000512866 SCRIBQ14160 1630 aa13.54□□□□□ -0.24
PGM3-211ENST00000512866 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
PGM3-211ENST00000512866 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
PGM3-211ENST00000512866 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
PGM3-211ENST00000512866 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
PGM3-211ENST00000512866 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
PGM3-211ENST00000512866 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
PGM3-211ENST00000512866 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
PGM3-211ENST00000512866 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
PGM3-211ENST00000512866 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.29
PGM3-211ENST00000512866 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
PGM3-211ENST00000512866 NESP48681 1621 aa13.18□□□□□ -0.3
PGM3-211ENST00000512866 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
PGM3-211ENST00000512866 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
PGM3-211ENST00000512866 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
PGM3-211ENST00000512866 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
PGM3-211ENST00000512866 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
PGM3-211ENST00000512866 WDR62O43379 1518 aa13.09□□□□□ -0.31
PGM3-211ENST00000512866 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.31
PGM3-211ENST00000512866 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
PGM3-211ENST00000512866 ARHGEF11O15085 1522 aa13□□□□□ -0.33
PGM3-211ENST00000512866 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
PGM3-211ENST00000512866 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.33
PGM3-211ENST00000512866 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
PGM3-211ENST00000512866 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
PGM3-211ENST00000512866 SMARCA4P51532 1647 aa12.89□□□□□ -0.35
PGM3-211ENST00000512866 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
PGM3-211ENST00000512866 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
PGM3-211ENST00000512866 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
PGM3-211ENST00000512866 RSF1Q96T23 1441 aaPredicted RBP12.82□□□□□ -0.36
PGM3-211ENST00000512866 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
PGM3-211ENST00000512866 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
PGM3-211ENST00000512866 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
PGM3-211ENST00000512866 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
PGM3-211ENST00000512866 CFTRP13569 1480 aa12.58□□□□□ -0.4
PGM3-211ENST00000512866 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
PGM3-211ENST00000512866 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
PGM3-211ENST00000512866 CHD1O14646 1710 aa12.5□□□□□ -0.41
PGM3-211ENST00000512866 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
PGM3-211ENST00000512866 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
PGM3-211ENST00000512866 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
PGM3-211ENST00000512866 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
PGM3-211ENST00000512866 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
PGM3-211ENST00000512866 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
PGM3-211ENST00000512866 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
PGM3-211ENST00000512866 KDM4FA0A1W2PPD8 638 aa12.38□□□□□ -0.43
PGM3-211ENST00000512866 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
PGM3-211ENST00000512866 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
PGM3-211ENST00000512866 TOPBP1Q92547 1522 aa12.36□□□□□ -0.43
PGM3-211ENST00000512866 FBLN2P98095 1184 aa12.33□□□□□ -0.43
PGM3-211ENST00000512866 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
PGM3-211ENST00000512866 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
PGM3-211ENST00000512866 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.449e-6■□□□□ 10.2
PGM3-211ENST00000512866 DNMBPQ6XZF7 1577 aa12.29□□□□□ -0.44
PGM3-211ENST00000512866 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
PGM3-211ENST00000512866 SOCS7O14512 581 aa12.26□□□□□ -0.45
PGM3-211ENST00000512866 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
PGM3-211ENST00000512866 KIF13AQ9H1H9 1805 aa12.25□□□□□ -0.45
PGM3-211ENST00000512866 SYNJ2O15056 1496 aa12.23□□□□□ -0.45
PGM3-211ENST00000512866 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
PGM3-211ENST00000512866 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.46
PGM3-211ENST00000512866 KDM6BO15054 1643 aa12.2□□□□□ -0.46
PGM3-211ENST00000512866 WIZO95785 1651 aa12.2□□□□□ -0.46
PGM3-211ENST00000512866 ABCC10Q5T3U5 1492 aa12.2□□□□□ -0.46
PGM3-211ENST00000512866 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
PGM3-211ENST00000512866 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
PGM3-211ENST00000512866 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
PGM3-211ENST00000512866 MAPKBP1O60336 1514 aa12.14□□□□□ -0.47
PGM3-211ENST00000512866 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
PGM3-211ENST00000512866 SOGA1O94964 1423 aa12.12□□□□□ -0.47
PGM3-211ENST00000512866 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
PGM3-211ENST00000512866 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
PGM3-211ENST00000512866 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
PGM3-211ENST00000512866 DIP2BQ9P265 1576 aa12.07□□□□□ -0.48
PGM3-211ENST00000512866 SHROOM2Q13796 1616 aa12.05□□□□□ -0.48
PGM3-211ENST00000512866 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
PGM3-211ENST00000512866 TOP2BQ02880 1626 aa12.03□□□□□ -0.48
PGM3-211ENST00000512866 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
PGM3-211ENST00000512866 NUP160Q12769 1436 aa12.01□□□□□ -0.49
PGM3-211ENST00000512866 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms