RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 NISCHQ9Y2I1 1504 aa9.44□□□□□ -0.9
SEC24D-214ENST00000514561 AEBP2Q6ZN18 517 aaPredicted RBP9.01□□□□□ -0.97
SEC24D-214ENST00000514561 SLC24A1O60721 1099 aa8.87□□□□□ -0.99
SEC24D-214ENST00000514561 CCDC180Q9P1Z9 1646 aa8.77□□□□□ -1.01
SEC24D-214ENST00000514561 CHIC1Q5VXU3 224 aa8.7□□□□□ -1.02
SEC24D-214ENST00000514561 DCAF8L2P0C7V8 631 aa8.48□□□□□ -1.05
SEC24D-214ENST00000514561 PLPPR3Q6T4P5 718 aa8.48□□□□□ -1.05
SEC24D-214ENST00000514561 MYO15BQ96JP2 1530 aa8.36□□□□□ -1.07
SEC24D-214ENST00000514561 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.07
SEC24D-214ENST00000514561 SHROOM4Q9ULL8 1493 aa8.22□□□□□ -1.09
SEC24D-214ENST00000514561 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
SEC24D-214ENST00000514561 EHMT2Q96KQ7 1210 aa8.19□□□□□ -1.1
SEC24D-214ENST00000514561 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
SEC24D-214ENST00000514561 PHF23Q9BUL5 403 aaPredicted RBP8.1□□□□□ -1.11
SEC24D-214ENST00000514561 ZCCHC6Q5VYS8 1495 aaKnown RBP8.05□□□□□ -1.12
SEC24D-214ENST00000514561 KCNA4P22459 653 aa8□□□□□ -1.13
SEC24D-214ENST00000514561 CSRNP3Q8WYN3 585 aa7.96□□□□□ -1.13
SEC24D-214ENST00000514561 DAXXQ9UER7 740 aaPredicted RBP7.91□□□□□ -1.14
SEC24D-214ENST00000514561 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.15
SEC24D-214ENST00000514561 NCBP3Q53F19 620 aaKnown RBP7.9□□□□□ -1.15
SEC24D-214ENST00000514561 NACADO15069 1562 aa7.9□□□□□ -1.15
SEC24D-214ENST00000514561 HRCP23327 699 aa7.87□□□□□ -1.15
SEC24D-214ENST00000514561 PELP1Q8IZL8 1130 aaKnown RBP7.81□□□□□ -1.16
SEC24D-214ENST00000514561 TIMELESSQ9UNS1 1208 aa7.74□□□□□ -1.17
SEC24D-214ENST00000514561 UNC13AQ9UPW8 1703 aa7.74□□□□□ -1.17
SEC24D-214ENST00000514561 APLP2Q06481 763 aa7.7□□□□□ -1.18
SEC24D-214ENST00000514561 RB1CC1Q8TDY2 1594 aa7.67□□□□□ -1.18
SEC24D-214ENST00000514561 FAM9AQ8IZU1 332 aaPredicted RBP7.67□□□□□ -1.18
SEC24D-214ENST00000514561 PEG3Q9GZU2 1588 aa7.62□□□□□ -1.19
SEC24D-214ENST00000514561 PPARGC1BQ86YN6 1023 aaKnown RBP7.58□□□□□ -1.2
SEC24D-214ENST00000514561 ABCC9O60706 1549 aa7.58□□□□□ -1.2
SEC24D-214ENST00000514561 AMER1Q5JTC6 1135 aaPredicted RBP7.57□□□□□ -1.2
SEC24D-214ENST00000514561 MYT1Q01538 1121 aa7.55□□□□□ -1.2
SEC24D-214ENST00000514561 PCGF6Q9BYE7 350 aa7.55□□□□□ -1.2
SEC24D-214ENST00000514561 SCAF1Q9H7N4 1312 aaKnown RBP7.55□□□□□ -1.2
SEC24D-214ENST00000514561 TTBK1Q5TCY1 1321 aaPredicted RBP7.53□□□□□ -1.2
SEC24D-214ENST00000514561 ZBTB22O15209 634 aa7.52□□□□□ -1.21
SEC24D-214ENST00000514561 BICRAQ9NZM4 1560 aa7.51□□□□□ -1.21
SEC24D-214ENST00000514561 TRIM41Q8WV44 630 aa7.5□□□□□ -1.21
SEC24D-214ENST00000514561 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
SEC24D-214ENST00000514561 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
SEC24D-214ENST00000514561 RANGAP1P46060 587 aaPredicted RBP7.44□□□□□ -1.22
SEC24D-214ENST00000514561 SMARCA2P51531 1590 aa7.44□□□□□ -1.22
SEC24D-214ENST00000514561 PRDM2Q13029 1718 aa7.44□□□□□ -1.22
SEC24D-214ENST00000514561 TAOK2Q9UL54 1235 aa7.43□□□□□ -1.22
SEC24D-214ENST00000514561 EIF4G1Q04637 1599 aaKnown RBP7.39□□□□□ -1.23
SEC24D-214ENST00000514561 ARXQ96QS3 562 aa7.39□□□□□ -1.23
SEC24D-214ENST00000514561 ADRA2BP18089 450 aa7.38□□□□□ -1.23
SEC24D-214ENST00000514561 TULP1O00294 542 aaPredicted RBP7.36□□□□□ -1.23
SEC24D-214ENST00000514561 PABPN1Q86U42 306 aaKnown RBP eCLIP7.36□□□□□ -1.23
SEC24D-214ENST00000514561 BAZ1AQ9NRL2 1556 aaPredicted RBP7.36□□□□□ -1.23
SEC24D-214ENST00000514561 HMGXB3Q12766 1538 aa7.33□□□□□ -1.24
SEC24D-214ENST00000514561 SMARCA4P51532 1647 aa7.32□□□□□ -1.24
SEC24D-214ENST00000514561 UBTFP17480 764 aaKnown RBP7.32□□□□□ -1.24
SEC24D-214ENST00000514561 ACIN1Q9UKV3 1341 aaKnown RBP7.25□□□□□ -1.25
SEC24D-214ENST00000514561 TRIM26Q12899 539 aaPredicted RBP7.25□□□□□ -1.25
SEC24D-214ENST00000514561 SCRIBQ14160 1630 aa7.23□□□□□ -1.25
SEC24D-214ENST00000514561 ZEB1P37275 1124 aaPredicted RBP7.23□□□□□ -1.25
SEC24D-214ENST00000514561 TOP2AP11388 1531 aaKnown RBP7.23□□□□□ -1.25
SEC24D-214ENST00000514561 CCER1Q8TC90 406 aaPredicted RBP7.22□□□□□ -1.25
SEC24D-214ENST00000514561 NEUROD1Q13562 356 aa7.21□□□□□ -1.25
SEC24D-214ENST00000514561 ATP1B4Q9UN42 357 aaPredicted RBP7.21□□□□□ -1.26
SEC24D-214ENST00000514561 PPP6R1Q9UPN7 881 aa7.2□□□□□ -1.26
SEC24D-214ENST00000514561 TPRNQ4KMQ1 711 aa7.19□□□□□ -1.26
SEC24D-214ENST00000514561 PLCB2Q00722 1185 aa7.18□□□□□ -1.26
SEC24D-214ENST00000514561 KDM2AQ9Y2K7 1162 aa7.18□□□□□ -1.26
SEC24D-214ENST00000514561 PLEKHG5O94827 1062 aa7.17□□□□□ -1.26
SEC24D-214ENST00000514561 WDR97A6NE52 1622 aa7.16□□□□□ -1.26
SEC24D-214ENST00000514561 NCAPD3P42695 1498 aa7.15□□□□□ -1.27
SEC24D-214ENST00000514561 SENP3Q9H4L4 574 aaPredicted RBP7.13□□□□□ -1.27
SEC24D-214ENST00000514561 GTF3C3Q9Y5Q9 886 aa7.12□□□□□ -1.27
SEC24D-214ENST00000514561 SLC4A1APQ9BWU0 796 aaKnown RBP7.11□□□□□ -1.27
SEC24D-214ENST00000514561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.11□□□□□ -1.27
SEC24D-214ENST00000514561 RSF1Q96T23 1441 aaPredicted RBP7.1□□□□□ -1.27
SEC24D-214ENST00000514561 HNRNPUL2Q1KMD3 747 aaKnown RBP7.1□□□□□ -1.27
SEC24D-214ENST00000514561 BIVM-ERCC5R4GMW8 1640 aa7.1□□□□□ -1.27
SEC24D-214ENST00000514561 ITGAEP38570 1179 aa7.1□□□□□ -1.27
SEC24D-214ENST00000514561 MROH2BQ7Z745 1585 aa7.08□□□□□ -1.28
SEC24D-214ENST00000514561 FBLN2P98095 1184 aa7.05□□□□□ -1.28
SEC24D-214ENST00000514561 WIZO95785 1651 aa7.05□□□□□ -1.28
SEC24D-214ENST00000514561 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
SEC24D-214ENST00000514561 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
SEC24D-214ENST00000514561 ATAD2BQ9ULI0 1458 aa7.03□□□□□ -1.28
SEC24D-214ENST00000514561 CECR2Q9BXF3 1484 aa7.02□□□□□ -1.29
SEC24D-214ENST00000514561 BCANQ96GW7 911 aa7.02□□□□□ -1.29
SEC24D-214ENST00000514561 TMEM132AQ24JP5 1023 aa7.01□□□□□ -1.29
SEC24D-214ENST00000514561 PODXL2Q9NZ53 605 aa7.01□□□□□ -1.29
SEC24D-214ENST00000514561 HOMEZQ8IX15 550 aa7.01□□□□□ -1.29
SEC24D-214ENST00000514561 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
SEC24D-214ENST00000514561 NPM3O75607 178 aaKnown RBP6.98□□□□□ -1.29
SEC24D-214ENST00000514561 BAZ1BQ9UIG0 1483 aaKnown RBP6.98□□□□□ -1.29
SEC24D-214ENST00000514561 CENPBP07199 599 aaPredicted RBP6.98□□□□□ -1.29
SEC24D-214ENST00000514561 P3H3Q8IVL6 736 aa6.95□□□□□ -1.3
SEC24D-214ENST00000514561 DIEXFQ68CQ4 756 aaKnown RBP6.94□□□□□ -1.3
SEC24D-214ENST00000514561 ANP32EQ9BTT0 268 aa6.94□□□□□ -1.3
SEC24D-214ENST00000514561 CC2D2AQ9P2K1 1620 aa6.94□□□□□ -1.3
SEC24D-214ENST00000514561 TOP2BQ02880 1626 aa6.93□□□□□ -1.3
SEC24D-214ENST00000514561 FOXD1Q16676 465 aa6.93□□□□□ -1.3
SEC24D-214ENST00000514561 TRHP20396 242 aaPredicted RBP6.93□□□□□ -1.3
SEC24D-214ENST00000514561 CFTRP13569 1480 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms