RNA–Protein interactions for RNA: ENST00000616566.4

PGM3-215, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-215ENST00000616566 NISCHQ9Y2I1 1504 aa12.4□□□□□ -0.42
PGM3-215ENST00000616566 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
PGM3-215ENST00000616566 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
PGM3-215ENST00000616566 DCAF8L2P0C7V8 631 aa10.75□□□□□ -0.69
PGM3-215ENST00000616566 CHIC1Q5VXU3 224 aa10.52□□□□□ -0.72
PGM3-215ENST00000616566 PCGF6Q9BYE7 350 aa10.49□□□□□ -0.73
PGM3-215ENST00000616566 ZCCHC6Q5VYS8 1495 aaKnown RBP10.48□□□□□ -0.73
PGM3-215ENST00000616566 HRCP23327 699 aa10.47□□□□□ -0.73
PGM3-215ENST00000616566 MYO15BQ96JP2 1530 aa10.39□□□□□ -0.75
PGM3-215ENST00000616566 CCDC180Q9P1Z9 1646 aa10.31□□□□□ -0.76
PGM3-215ENST00000616566 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
PGM3-215ENST00000616566 PPARGC1BQ86YN6 1023 aaKnown RBP10.31□□□□□ -0.76
PGM3-215ENST00000616566 TRIM26Q12899 539 aaPredicted RBP10.16□□□□□ -0.78
PGM3-215ENST00000616566 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
PGM3-215ENST00000616566 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
PGM3-215ENST00000616566 DCAF1Q9Y4B6 1507 aa10.13□□□□□ -0.79
PGM3-215ENST00000616566 TRIM41Q8WV44 630 aa10.12□□□□□ -0.79
PGM3-215ENST00000616566 ZEB1P37275 1124 aaPredicted RBP10.03□□□□□ -0.8
PGM3-215ENST00000616566 RSF1Q96T23 1441 aaPredicted RBP9.93□□□□□ -0.82
PGM3-215ENST00000616566 SCRIBQ14160 1630 aa9.92□□□□□ -0.82
PGM3-215ENST00000616566 ABCC9O60706 1549 aa9.89□□□□□ -0.83
PGM3-215ENST00000616566 TTBK1Q5TCY1 1321 aaPredicted RBP9.85□□□□□ -0.83
PGM3-215ENST00000616566 CCER1Q8TC90 406 aaPredicted RBP9.84□□□□□ -0.83
PGM3-215ENST00000616566 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
PGM3-215ENST00000616566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.81□□□□□ -0.84
PGM3-215ENST00000616566 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.84
PGM3-215ENST00000616566 CECR2Q9BXF3 1484 aa9.75□□□□□ -0.85
PGM3-215ENST00000616566 SCAF1Q9H7N4 1312 aaKnown RBP9.74□□□□□ -0.85
PGM3-215ENST00000616566 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
PGM3-215ENST00000616566 MROH2BQ7Z745 1585 aa9.68□□□□□ -0.86
PGM3-215ENST00000616566 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
PGM3-215ENST00000616566 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
PGM3-215ENST00000616566 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
PGM3-215ENST00000616566 NACADO15069 1562 aa9.62□□□□□ -0.87
PGM3-215ENST00000616566 NEUROD1Q13562 356 aa9.61□□□□□ -0.87
PGM3-215ENST00000616566 WIZO95785 1651 aa9.6□□□□□ -0.87
PGM3-215ENST00000616566 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
PGM3-215ENST00000616566 YTHDC1Q96MU7 727 aaKnown RBP9.58□□□□□ -0.88
PGM3-215ENST00000616566 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
PGM3-215ENST00000616566 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
PGM3-215ENST00000616566 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
PGM3-215ENST00000616566 APLP2Q06481 763 aa9.56□□□□□ -0.88
PGM3-215ENST00000616566 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
PGM3-215ENST00000616566 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
PGM3-215ENST00000616566 CCDC88BA6NC98 1476 aa9.53□□□□□ -0.88
PGM3-215ENST00000616566 ABCC8Q09428 1581 aa9.52□□□□□ -0.88
PGM3-215ENST00000616566 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
PGM3-215ENST00000616566 SOGA1O94964 1423 aa9.51□□□□□ -0.89
PGM3-215ENST00000616566 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
PGM3-215ENST00000616566 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
PGM3-215ENST00000616566 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.9
PGM3-215ENST00000616566 TOP2AP11388 1531 aaKnown RBP9.44□□□□□ -0.9
PGM3-215ENST00000616566 EEA1Q15075 1411 aa9.44□□□□□ -0.9
PGM3-215ENST00000616566 RUSC2Q8N2Y8 1516 aa9.42□□□□□ -0.9
PGM3-215ENST00000616566 GOLGA3Q08378 1498 aa9.42□□□□□ -0.9
PGM3-215ENST00000616566 MIER1Q8N108 512 aa9.4□□□□□ -0.9
PGM3-215ENST00000616566 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
PGM3-215ENST00000616566 CLIP1P30622 1438 aa9.38□□□□□ -0.91
PGM3-215ENST00000616566 SMARCA4P51532 1647 aa9.38□□□□□ -0.91
PGM3-215ENST00000616566 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
PGM3-215ENST00000616566 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
PGM3-215ENST00000616566 MYT1Q01538 1121 aa9.32□□□□□ -0.92
PGM3-215ENST00000616566 ITGAEP38570 1179 aa9.31□□□□□ -0.92
PGM3-215ENST00000616566 VPS8Q8N3P4 1428 aa9.29□□□□□ -0.92
PGM3-215ENST00000616566 RAPGEF2Q9Y4G8 1499 aa9.25□□□□□ -0.93
PGM3-215ENST00000616566 BAZ1BQ9UIG0 1483 aaKnown RBP9.23□□□□□ -0.93
PGM3-215ENST00000616566 SYNJ1O43426 1573 aa9.22□□□□□ -0.93
PGM3-215ENST00000616566 KANK4Q5T7N3 995 aaPredicted RBP9.2□□□□□ -0.94
PGM3-215ENST00000616566 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
PGM3-215ENST00000616566 KIF21BO75037 1637 aa9.19□□□□□ -0.94
PGM3-215ENST00000616566 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
PGM3-215ENST00000616566 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
PGM3-215ENST00000616566 DHX57Q6P158 1386 aaKnown RBP9.17□□□□□ -0.94
PGM3-215ENST00000616566 FAM50AQ14320 339 aaKnown RBP9.14□□□□□ -0.95
PGM3-215ENST00000616566 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
PGM3-215ENST00000616566 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
PGM3-215ENST00000616566 BCANQ96GW7 911 aa9.13□□□□□ -0.95
PGM3-215ENST00000616566 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
PGM3-215ENST00000616566 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
PGM3-215ENST00000616566 KIF27Q86VH2 1401 aa9.11□□□□□ -0.95
PGM3-215ENST00000616566 P3H3Q8IVL6 736 aa9.1□□□□□ -0.95
PGM3-215ENST00000616566 DDX10Q13206 875 aaKnown RBP9.09□□□□□ -0.95
PGM3-215ENST00000616566 NEFLP07196 543 aa9.09□□□□□ -0.95
PGM3-215ENST00000616566 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
PGM3-215ENST00000616566 ARAP1Q96P48 1450 aa9.08□□□□□ -0.96
PGM3-215ENST00000616566 PRXQ9BXM0 1461 aa9.07□□□□□ -0.96
PGM3-215ENST00000616566 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
PGM3-215ENST00000616566 SIN3AQ96ST3 1273 aa9.06□□□□□ -0.96
PGM3-215ENST00000616566 TOP2BQ02880 1626 aa9.05□□□□□ -0.96
PGM3-215ENST00000616566 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
PGM3-215ENST00000616566 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
PGM3-215ENST00000616566 FKBP8Q14318 412 aa9.04□□□□□ -0.96
PGM3-215ENST00000616566 ERICH3Q5RHP9 1530 aa9.04□□□□□ -0.96
PGM3-215ENST00000616566 RRBP1Q9P2E9 1410 aaKnown RBP9.03□□□□□ -0.96
PGM3-215ENST00000616566 ANP32CO43423 234 aa9.01□□□□□ -0.97
PGM3-215ENST00000616566 CUX2O14529 1486 aa9.01□□□□□ -0.97
PGM3-215ENST00000616566 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
PGM3-215ENST00000616566 TRIM52Q96A61 297 aa9.01□□□□□ -0.97
PGM3-215ENST00000616566 ARHGAP35Q9NRY4 1499 aa9□□□□□ -0.97
PGM3-215ENST00000616566 SETD5Q9C0A6 1442 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms