RNA–Protein interactions for RNA: ENST00000496684.6

CCT3-215, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-215ENST00000496684 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
CCT3-215ENST00000496684 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
CCT3-215ENST00000496684 ABCC9O60706 1549 aa18.14■□□□□ 0.49
CCT3-215ENST00000496684 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
CCT3-215ENST00000496684 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
CCT3-215ENST00000496684 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
CCT3-215ENST00000496684 RB1CC1Q8TDY2 1594 aa17.08■□□□□ 0.32
CCT3-215ENST00000496684 NACADO15069 1562 aa16.86■□□□□ 0.29
CCT3-215ENST00000496684 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
CCT3-215ENST00000496684 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCT3-215ENST00000496684 BICRAQ9NZM4 1560 aa16.7■□□□□ 0.26
CCT3-215ENST00000496684 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
CCT3-215ENST00000496684 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
CCT3-215ENST00000496684 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
CCT3-215ENST00000496684 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
CCT3-215ENST00000496684 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
CCT3-215ENST00000496684 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
CCT3-215ENST00000496684 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
CCT3-215ENST00000496684 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
CCT3-215ENST00000496684 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
CCT3-215ENST00000496684 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
CCT3-215ENST00000496684 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
CCT3-215ENST00000496684 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
CCT3-215ENST00000496684 CUX2O14529 1486 aa15.77■□□□□ 0.11
CCT3-215ENST00000496684 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
CCT3-215ENST00000496684 NCAPD3P42695 1498 aa15.56■□□□□ 0.08
CCT3-215ENST00000496684 NESP48681 1621 aa15.51■□□□□ 0.07
CCT3-215ENST00000496684 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
CCT3-215ENST00000496684 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
CCT3-215ENST00000496684 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
CCT3-215ENST00000496684 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
CCT3-215ENST00000496684 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
CCT3-215ENST00000496684 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
CCT3-215ENST00000496684 LAMC3Q9Y6N6 1575 aa15.29■□□□□ 0.04
CCT3-215ENST00000496684 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
CCT3-215ENST00000496684 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
CCT3-215ENST00000496684 PEG3Q9GZU2 1588 aa15.27■□□□□ 0.03
CCT3-215ENST00000496684 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
CCT3-215ENST00000496684 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
CCT3-215ENST00000496684 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
CCT3-215ENST00000496684 WDR62O43379 1518 aa15.12■□□□□ 0.01
CCT3-215ENST00000496684 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
CCT3-215ENST00000496684 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
CCT3-215ENST00000496684 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
CCT3-215ENST00000496684 WIZO95785 1651 aa14.95□□□□□ -0.02
CCT3-215ENST00000496684 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
CCT3-215ENST00000496684 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
CCT3-215ENST00000496684 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
CCT3-215ENST00000496684 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
CCT3-215ENST00000496684 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
CCT3-215ENST00000496684 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
CCT3-215ENST00000496684 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
CCT3-215ENST00000496684 CFTRP13569 1480 aa14.83□□□□□ -0.03
CCT3-215ENST00000496684 FOXD1Q16676 465 aa14.8□□□□□ -0.04
CCT3-215ENST00000496684 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
CCT3-215ENST00000496684 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
CCT3-215ENST00000496684 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
CCT3-215ENST00000496684 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
CCT3-215ENST00000496684 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
CCT3-215ENST00000496684 CHD1O14646 1710 aa14.66□□□□□ -0.06
CCT3-215ENST00000496684 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
CCT3-215ENST00000496684 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
CCT3-215ENST00000496684 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
CCT3-215ENST00000496684 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
CCT3-215ENST00000496684 CYB5RLQ6IPT4 315 aa14.59□□□□□ -0.07
CCT3-215ENST00000496684 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
CCT3-215ENST00000496684 DNMBPQ6XZF7 1577 aa14.53□□□□□ -0.08
CCT3-215ENST00000496684 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
CCT3-215ENST00000496684 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
CCT3-215ENST00000496684 AQRO60306 1485 aaKnown RBP eCLIP14.51□□□□□ -0.095e-9■■■■□ 26.3
CCT3-215ENST00000496684 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
CCT3-215ENST00000496684 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
CCT3-215ENST00000496684 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
CCT3-215ENST00000496684 FBLN2P98095 1184 aa14.39□□□□□ -0.11
CCT3-215ENST00000496684 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
CCT3-215ENST00000496684 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
CCT3-215ENST00000496684 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
CCT3-215ENST00000496684 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
CCT3-215ENST00000496684 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
CCT3-215ENST00000496684 SOGA1O94964 1423 aa14.3□□□□□ -0.12
CCT3-215ENST00000496684 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
CCT3-215ENST00000496684 FGD5Q6ZNL6 1462 aa14.28□□□□□ -0.12
CCT3-215ENST00000496684 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
CCT3-215ENST00000496684 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
CCT3-215ENST00000496684 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
CCT3-215ENST00000496684 CUX1P39880 1505 aa14.24□□□□□ -0.13
CCT3-215ENST00000496684 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
CCT3-215ENST00000496684 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
CCT3-215ENST00000496684 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
CCT3-215ENST00000496684 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
CCT3-215ENST00000496684 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
CCT3-215ENST00000496684 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
CCT3-215ENST00000496684 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
CCT3-215ENST00000496684 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
CCT3-215ENST00000496684 GRIN2AQ12879 1464 aa14.08□□□□□ -0.16
CCT3-215ENST00000496684 ADAMTS12P58397 1594 aa14.08□□□□□ -0.16
CCT3-215ENST00000496684 NUP160Q12769 1436 aa14.06□□□□□ -0.16
CCT3-215ENST00000496684 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
CCT3-215ENST00000496684 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
CCT3-215ENST00000496684 ADRA2BP18089 450 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1120.9 ms