RNA–Protein interactions for RNA: ENST00000261254.7

CCND2-201, Transcript of cyclin D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND2, Length 6,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND2-201ENST00000261254 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
CCND2-201ENST00000261254 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
CCND2-201ENST00000261254 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
CCND2-201ENST00000261254 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
CCND2-201ENST00000261254 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
CCND2-201ENST00000261254 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
CCND2-201ENST00000261254 APLP2Q06481 763 aa17.26■□□□□ 0.35
CCND2-201ENST00000261254 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
CCND2-201ENST00000261254 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
CCND2-201ENST00000261254 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
CCND2-201ENST00000261254 ATP1B4Q9UN42 357 aaPredicted RBP17■□□□□ 0.31
CCND2-201ENST00000261254 ABCC9O60706 1549 aa16.94■□□□□ 0.3
CCND2-201ENST00000261254 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
CCND2-201ENST00000261254 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCND2-201ENST00000261254 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
CCND2-201ENST00000261254 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
CCND2-201ENST00000261254 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
CCND2-201ENST00000261254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
CCND2-201ENST00000261254 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
CCND2-201ENST00000261254 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
CCND2-201ENST00000261254 ITGAEP38570 1179 aa16.3■□□□□ 0.2
CCND2-201ENST00000261254 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
CCND2-201ENST00000261254 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
CCND2-201ENST00000261254 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
CCND2-201ENST00000261254 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
CCND2-201ENST00000261254 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
CCND2-201ENST00000261254 FBLN2P98095 1184 aa16.11■□□□□ 0.17
CCND2-201ENST00000261254 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
CCND2-201ENST00000261254 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
CCND2-201ENST00000261254 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
CCND2-201ENST00000261254 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
CCND2-201ENST00000261254 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
CCND2-201ENST00000261254 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
CCND2-201ENST00000261254 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
CCND2-201ENST00000261254 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
CCND2-201ENST00000261254 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
CCND2-201ENST00000261254 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
CCND2-201ENST00000261254 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
CCND2-201ENST00000261254 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
CCND2-201ENST00000261254 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
CCND2-201ENST00000261254 NEFLP07196 543 aa15.75■□□□□ 0.11
CCND2-201ENST00000261254 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
CCND2-201ENST00000261254 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
CCND2-201ENST00000261254 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
CCND2-201ENST00000261254 HRCP23327 699 aa15.63■□□□□ 0.09
CCND2-201ENST00000261254 ZNF777Q9ULD5 760 aaPredicted RBP15.62■□□□□ 0.09
CCND2-201ENST00000261254 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
CCND2-201ENST00000261254 NACADO15069 1562 aa15.58■□□□□ 0.08
CCND2-201ENST00000261254 BCANQ96GW7 911 aa15.51■□□□□ 0.07
CCND2-201ENST00000261254 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
CCND2-201ENST00000261254 CDK11AQ9UQ88 783 aaPredicted RBP15.46■□□□□ 0.07
CCND2-201ENST00000261254 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCND2-201ENST00000261254 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
CCND2-201ENST00000261254 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
CCND2-201ENST00000261254 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
CCND2-201ENST00000261254 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
CCND2-201ENST00000261254 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
CCND2-201ENST00000261254 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
CCND2-201ENST00000261254 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
CCND2-201ENST00000261254 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
CCND2-201ENST00000261254 CHIC2Q9UKJ5 165 aa15.27■□□□□ 0.03
CCND2-201ENST00000261254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCND2-201ENST00000261254 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
CCND2-201ENST00000261254 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
CCND2-201ENST00000261254 ANP32CO43423 234 aa15.21■□□□□ 0.03
CCND2-201ENST00000261254 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
CCND2-201ENST00000261254 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
CCND2-201ENST00000261254 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
CCND2-201ENST00000261254 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
CCND2-201ENST00000261254 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
CCND2-201ENST00000261254 MTUS2Q5JR59 1369 aa15.16■□□□□ 0.02
CCND2-201ENST00000261254 CLSPNQ9HAW4 1339 aa15.14■□□□□ 0.01
CCND2-201ENST00000261254 CLIP1P30622 1438 aa15.13■□□□□ 0.01
CCND2-201ENST00000261254 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
CCND2-201ENST00000261254 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
CCND2-201ENST00000261254 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
CCND2-201ENST00000261254 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
CCND2-201ENST00000261254 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
CCND2-201ENST00000261254 GOLGA3Q08378 1498 aa15.08■□□□□ 0.01
CCND2-201ENST00000261254 KIF27Q86VH2 1401 aa15.08■□□□□ 0
CCND2-201ENST00000261254 NEFMP07197 916 aa15.06■□□□□ 0
CCND2-201ENST00000261254 PLEKHD1A6NEE1 506 aa15.05■□□□□ -0
CCND2-201ENST00000261254 BCL11AQ9H165 835 aa15.05■□□□□ -0
CCND2-201ENST00000261254 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
CCND2-201ENST00000261254 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
CCND2-201ENST00000261254 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
CCND2-201ENST00000261254 CANXP27824 592 aaKnown RBP15.02■□□□□ -0
CCND2-201ENST00000261254 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
CCND2-201ENST00000261254 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
CCND2-201ENST00000261254 EEA1Q15075 1411 aa15□□□□□ -0.01
CCND2-201ENST00000261254 CEP162Q5TB80 1403 aa15□□□□□ -0.01
CCND2-201ENST00000261254 ARID4BQ4LE39 1312 aaPredicted RBP14.98□□□□□ -0.01
CCND2-201ENST00000261254 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
CCND2-201ENST00000261254 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.02
CCND2-201ENST00000261254 CUX2O14529 1486 aa14.95□□□□□ -0.02
CCND2-201ENST00000261254 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
CCND2-201ENST00000261254 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
CCND2-201ENST00000261254 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
CCND2-201ENST00000261254 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
CCND2-201ENST00000261254 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms