RNA–Protein interactions for RNA: ENST00000518176.5

NDRG1-209, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-209ENST00000518176 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
NDRG1-209ENST00000518176 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
NDRG1-209ENST00000518176 ABCC9O60706 1549 aa27.84■■■□□ 2.05
NDRG1-209ENST00000518176 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
NDRG1-209ENST00000518176 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
NDRG1-209ENST00000518176 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
NDRG1-209ENST00000518176 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
NDRG1-209ENST00000518176 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
NDRG1-209ENST00000518176 NACADO15069 1562 aa26.31■■□□□ 1.8
NDRG1-209ENST00000518176 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
NDRG1-209ENST00000518176 SHROOM4Q9ULL8 1493 aa26.1■■□□□ 1.77
NDRG1-209ENST00000518176 UNC13AQ9UPW8 1703 aa25.86■■□□□ 1.73
NDRG1-209ENST00000518176 PABPN1Q86U42 306 aaKnown RBP eCLIP25.86■■□□□ 1.73
NDRG1-209ENST00000518176 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
NDRG1-209ENST00000518176 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
NDRG1-209ENST00000518176 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
NDRG1-209ENST00000518176 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
NDRG1-209ENST00000518176 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.6
NDRG1-209ENST00000518176 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
NDRG1-209ENST00000518176 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
NDRG1-209ENST00000518176 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
NDRG1-209ENST00000518176 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
NDRG1-209ENST00000518176 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
NDRG1-209ENST00000518176 WIZO95785 1651 aa24.69■■□□□ 1.54
NDRG1-209ENST00000518176 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
NDRG1-209ENST00000518176 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
NDRG1-209ENST00000518176 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
NDRG1-209ENST00000518176 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
NDRG1-209ENST00000518176 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
NDRG1-209ENST00000518176 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
NDRG1-209ENST00000518176 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
NDRG1-209ENST00000518176 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
NDRG1-209ENST00000518176 NCAPD3P42695 1498 aa24.24■■□□□ 1.47
NDRG1-209ENST00000518176 CCDC88BA6NC98 1476 aa24.21■■□□□ 1.47
NDRG1-209ENST00000518176 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
NDRG1-209ENST00000518176 CUX2O14529 1486 aa24.04■■□□□ 1.44
NDRG1-209ENST00000518176 NESP48681 1621 aa23.84■■□□□ 1.41
NDRG1-209ENST00000518176 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
NDRG1-209ENST00000518176 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
NDRG1-209ENST00000518176 CFTRP13569 1480 aa23.68■■□□□ 1.38
NDRG1-209ENST00000518176 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
NDRG1-209ENST00000518176 ABCC8Q09428 1581 aa23.64■■□□□ 1.37
NDRG1-209ENST00000518176 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
NDRG1-209ENST00000518176 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
NDRG1-209ENST00000518176 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
NDRG1-209ENST00000518176 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
NDRG1-209ENST00000518176 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
NDRG1-209ENST00000518176 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
NDRG1-209ENST00000518176 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
NDRG1-209ENST00000518176 EEA1Q15075 1411 aa23.45■■□□□ 1.34
NDRG1-209ENST00000518176 PDS5BQ9NTI5 1447 aa23.45■■□□□ 1.34
NDRG1-209ENST00000518176 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
NDRG1-209ENST00000518176 CUX1P39880 1505 aa23.29■■□□□ 1.32
NDRG1-209ENST00000518176 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
NDRG1-209ENST00000518176 WDR62O43379 1518 aa23.24■■□□□ 1.31
NDRG1-209ENST00000518176 SOGA1O94964 1423 aa23.21■■□□□ 1.31
NDRG1-209ENST00000518176 LOC105371045A0A1W2PR82 267 aa23.2■■□□□ 1.3
NDRG1-209ENST00000518176 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
NDRG1-209ENST00000518176 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
NDRG1-209ENST00000518176 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
NDRG1-209ENST00000518176 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
NDRG1-209ENST00000518176 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.29
NDRG1-209ENST00000518176 KIF21BO75037 1637 aa23.08■■□□□ 1.29
NDRG1-209ENST00000518176 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
NDRG1-209ENST00000518176 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
NDRG1-209ENST00000518176 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
NDRG1-209ENST00000518176 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
NDRG1-209ENST00000518176 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
NDRG1-209ENST00000518176 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
NDRG1-209ENST00000518176 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
NDRG1-209ENST00000518176 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
NDRG1-209ENST00000518176 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
NDRG1-209ENST00000518176 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
NDRG1-209ENST00000518176 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
NDRG1-209ENST00000518176 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
NDRG1-209ENST00000518176 RAPGEF2Q9Y4G8 1499 aa22.78■■□□□ 1.24
NDRG1-209ENST00000518176 CEP162Q5TB80 1403 aa22.77■■□□□ 1.24
NDRG1-209ENST00000518176 IGF1RP08069 1367 aa22.76■■□□□ 1.23
NDRG1-209ENST00000518176 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
NDRG1-209ENST00000518176 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
NDRG1-209ENST00000518176 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
NDRG1-209ENST00000518176 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
NDRG1-209ENST00000518176 CUL7Q14999 1698 aa22.71■■□□□ 1.23
NDRG1-209ENST00000518176 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
NDRG1-209ENST00000518176 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
NDRG1-209ENST00000518176 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
NDRG1-209ENST00000518176 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
NDRG1-209ENST00000518176 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
NDRG1-209ENST00000518176 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
NDRG1-209ENST00000518176 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
NDRG1-209ENST00000518176 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
NDRG1-209ENST00000518176 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
NDRG1-209ENST00000518176 CLIP1P30622 1438 aa22.58■■□□□ 1.21
NDRG1-209ENST00000518176 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
NDRG1-209ENST00000518176 CHD1O14646 1710 aa22.52■■□□□ 1.2
NDRG1-209ENST00000518176 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
NDRG1-209ENST00000518176 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
NDRG1-209ENST00000518176 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.191e-8■■■■■ 31.9
NDRG1-209ENST00000518176 GRIN2BQ13224 1484 aa22.46■■□□□ 1.19
NDRG1-209ENST00000518176 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms