RNA–Protein interactions for RNA: ENST00000470592.5

MTHFD2-205, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 1,396 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-205ENST00000470592 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
MTHFD2-205ENST00000470592 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
MTHFD2-205ENST00000470592 NISCHQ9Y2I1 1504 aa20.8■□□□□ 0.92
MTHFD2-205ENST00000470592 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
MTHFD2-205ENST00000470592 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
MTHFD2-205ENST00000470592 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
MTHFD2-205ENST00000470592 ABCC9O60706 1549 aa19■□□□□ 0.63
MTHFD2-205ENST00000470592 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
MTHFD2-205ENST00000470592 FOXD1Q16676 465 aa18.42■□□□□ 0.54
MTHFD2-205ENST00000470592 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.49
MTHFD2-205ENST00000470592 ADRA2BP18089 450 aa18.08■□□□□ 0.49
MTHFD2-205ENST00000470592 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
MTHFD2-205ENST00000470592 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
MTHFD2-205ENST00000470592 NACADO15069 1562 aa17.9■□□□□ 0.46
MTHFD2-205ENST00000470592 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.43
MTHFD2-205ENST00000470592 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
MTHFD2-205ENST00000470592 MYO15BQ96JP2 1530 aa17.6■□□□□ 0.41
MTHFD2-205ENST00000470592 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
MTHFD2-205ENST00000470592 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
MTHFD2-205ENST00000470592 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
MTHFD2-205ENST00000470592 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.37
MTHFD2-205ENST00000470592 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
MTHFD2-205ENST00000470592 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
MTHFD2-205ENST00000470592 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
MTHFD2-205ENST00000470592 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
MTHFD2-205ENST00000470592 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
MTHFD2-205ENST00000470592 KCNA4P22459 653 aa17.03■□□□□ 0.32
MTHFD2-205ENST00000470592 SCRIBQ14160 1630 aa17.02■□□□□ 0.32
MTHFD2-205ENST00000470592 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
MTHFD2-205ENST00000470592 MSH5O43196 834 aa16.9■□□□□ 0.3
MTHFD2-205ENST00000470592 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.3
MTHFD2-205ENST00000470592 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
MTHFD2-205ENST00000470592 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
MTHFD2-205ENST00000470592 CUX2O14529 1486 aa16.62■□□□□ 0.25
MTHFD2-205ENST00000470592 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
MTHFD2-205ENST00000470592 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
MTHFD2-205ENST00000470592 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
MTHFD2-205ENST00000470592 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
MTHFD2-205ENST00000470592 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
MTHFD2-205ENST00000470592 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
MTHFD2-205ENST00000470592 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
MTHFD2-205ENST00000470592 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
MTHFD2-205ENST00000470592 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
MTHFD2-205ENST00000470592 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
MTHFD2-205ENST00000470592 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
MTHFD2-205ENST00000470592 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
MTHFD2-205ENST00000470592 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
MTHFD2-205ENST00000470592 LAMC3Q9Y6N6 1575 aa16.18■□□□□ 0.18
MTHFD2-205ENST00000470592 NESP48681 1621 aa16.18■□□□□ 0.18
MTHFD2-205ENST00000470592 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
MTHFD2-205ENST00000470592 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
MTHFD2-205ENST00000470592 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
MTHFD2-205ENST00000470592 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
MTHFD2-205ENST00000470592 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
MTHFD2-205ENST00000470592 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
MTHFD2-205ENST00000470592 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
MTHFD2-205ENST00000470592 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
MTHFD2-205ENST00000470592 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.15
MTHFD2-205ENST00000470592 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
MTHFD2-205ENST00000470592 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
MTHFD2-205ENST00000470592 WDR62O43379 1518 aa15.89■□□□□ 0.13
MTHFD2-205ENST00000470592 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
MTHFD2-205ENST00000470592 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
MTHFD2-205ENST00000470592 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
MTHFD2-205ENST00000470592 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
MTHFD2-205ENST00000470592 CFTRP13569 1480 aa15.73■□□□□ 0.11
MTHFD2-205ENST00000470592 WIZO95785 1651 aa15.72■□□□□ 0.11
MTHFD2-205ENST00000470592 ZBTB22O15209 634 aa15.62■□□□□ 0.09
MTHFD2-205ENST00000470592 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
MTHFD2-205ENST00000470592 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
MTHFD2-205ENST00000470592 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
MTHFD2-205ENST00000470592 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
MTHFD2-205ENST00000470592 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
MTHFD2-205ENST00000470592 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
MTHFD2-205ENST00000470592 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
MTHFD2-205ENST00000470592 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
MTHFD2-205ENST00000470592 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
MTHFD2-205ENST00000470592 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
MTHFD2-205ENST00000470592 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
MTHFD2-205ENST00000470592 CYB5RLQ6IPT4 315 aa15.44■□□□□ 0.06
MTHFD2-205ENST00000470592 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
MTHFD2-205ENST00000470592 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
MTHFD2-205ENST00000470592 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
MTHFD2-205ENST00000470592 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
MTHFD2-205ENST00000470592 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
MTHFD2-205ENST00000470592 FBLN2P98095 1184 aa15.37■□□□□ 0.05
MTHFD2-205ENST00000470592 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
MTHFD2-205ENST00000470592 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
MTHFD2-205ENST00000470592 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
MTHFD2-205ENST00000470592 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.049e-8■■■■■ 30.5
MTHFD2-205ENST00000470592 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
MTHFD2-205ENST00000470592 CHD1O14646 1710 aa15.26■□□□□ 0.03
MTHFD2-205ENST00000470592 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
MTHFD2-205ENST00000470592 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
MTHFD2-205ENST00000470592 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
MTHFD2-205ENST00000470592 SOGA1O94964 1423 aa15.25■□□□□ 0.03
MTHFD2-205ENST00000470592 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
MTHFD2-205ENST00000470592 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
MTHFD2-205ENST00000470592 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
MTHFD2-205ENST00000470592 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms