RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-222ENST00000522476 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
NDRG1-222ENST00000522476 ABCC9O60706 1549 aa26.14■■□□□ 1.78
NDRG1-222ENST00000522476 DNAJC5BQ9UF47 199 aa25.8■■□□□ 1.72
NDRG1-222ENST00000522476 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.62
NDRG1-222ENST00000522476 DNAJC5Q9H3Z4 198 aa24.66■■□□□ 1.54
NDRG1-222ENST00000522476 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
NDRG1-222ENST00000522476 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
NDRG1-222ENST00000522476 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
NDRG1-222ENST00000522476 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
NDRG1-222ENST00000522476 NACADO15069 1562 aa23.71■■□□□ 1.39
NDRG1-222ENST00000522476 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
NDRG1-222ENST00000522476 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
NDRG1-222ENST00000522476 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
NDRG1-222ENST00000522476 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
NDRG1-222ENST00000522476 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
NDRG1-222ENST00000522476 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
NDRG1-222ENST00000522476 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
NDRG1-222ENST00000522476 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
NDRG1-222ENST00000522476 CUX2O14529 1486 aa23.04■■□□□ 1.28
NDRG1-222ENST00000522476 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
NDRG1-222ENST00000522476 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
NDRG1-222ENST00000522476 SCRIBQ14160 1630 aa23■■□□□ 1.27
NDRG1-222ENST00000522476 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
NDRG1-222ENST00000522476 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
NDRG1-222ENST00000522476 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
NDRG1-222ENST00000522476 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
NDRG1-222ENST00000522476 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
NDRG1-222ENST00000522476 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
NDRG1-222ENST00000522476 WIZO95785 1651 aa22.08■■□□□ 1.12
NDRG1-222ENST00000522476 NESP48681 1621 aa22.07■■□□□ 1.12
NDRG1-222ENST00000522476 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
NDRG1-222ENST00000522476 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
NDRG1-222ENST00000522476 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
NDRG1-222ENST00000522476 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
NDRG1-222ENST00000522476 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
NDRG1-222ENST00000522476 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
NDRG1-222ENST00000522476 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
NDRG1-222ENST00000522476 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
NDRG1-222ENST00000522476 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
NDRG1-222ENST00000522476 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
NDRG1-222ENST00000522476 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
NDRG1-222ENST00000522476 KIF21AQ7Z4S6 1674 aa21.62■■□□□ 1.05
NDRG1-222ENST00000522476 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
NDRG1-222ENST00000522476 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
NDRG1-222ENST00000522476 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
NDRG1-222ENST00000522476 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
NDRG1-222ENST00000522476 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
NDRG1-222ENST00000522476 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
NDRG1-222ENST00000522476 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
NDRG1-222ENST00000522476 WDR62O43379 1518 aa21.45■■□□□ 1.02
NDRG1-222ENST00000522476 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
NDRG1-222ENST00000522476 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
NDRG1-222ENST00000522476 ILDR1Q86SU0 546 aaPredicted RBP21.34■■□□□ 1.01
NDRG1-222ENST00000522476 EEA1Q15075 1411 aa21.31■■□□□ 1
NDRG1-222ENST00000522476 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
NDRG1-222ENST00000522476 ABCC8Q09428 1581 aa21.28■■□□□ 1
NDRG1-222ENST00000522476 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
NDRG1-222ENST00000522476 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
NDRG1-222ENST00000522476 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
NDRG1-222ENST00000522476 ARAP1Q96P48 1450 aa21.14■□□□□ 0.98
NDRG1-222ENST00000522476 CFTRP13569 1480 aa21.12■□□□□ 0.97
NDRG1-222ENST00000522476 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
NDRG1-222ENST00000522476 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
NDRG1-222ENST00000522476 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
NDRG1-222ENST00000522476 CSRNP3Q8WYN3 585 aa21.02■□□□□ 0.96
NDRG1-222ENST00000522476 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
NDRG1-222ENST00000522476 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
NDRG1-222ENST00000522476 PRDM2Q13029 1718 aa21■□□□□ 0.95
NDRG1-222ENST00000522476 SOGA1O94964 1423 aa21■□□□□ 0.95
NDRG1-222ENST00000522476 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
NDRG1-222ENST00000522476 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
NDRG1-222ENST00000522476 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
NDRG1-222ENST00000522476 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.94
NDRG1-222ENST00000522476 KIF21BO75037 1637 aa20.87■□□□□ 0.93
NDRG1-222ENST00000522476 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
NDRG1-222ENST00000522476 CUX1P39880 1505 aa20.83■□□□□ 0.93
NDRG1-222ENST00000522476 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
NDRG1-222ENST00000522476 PCGF6Q9BYE7 350 aa20.78■□□□□ 0.92
NDRG1-222ENST00000522476 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
NDRG1-222ENST00000522476 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
NDRG1-222ENST00000522476 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
NDRG1-222ENST00000522476 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
NDRG1-222ENST00000522476 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
NDRG1-222ENST00000522476 FBLN2P98095 1184 aa20.72■□□□□ 0.91
NDRG1-222ENST00000522476 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
NDRG1-222ENST00000522476 CHD1O14646 1710 aa20.67■□□□□ 0.9
NDRG1-222ENST00000522476 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
NDRG1-222ENST00000522476 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.89
NDRG1-222ENST00000522476 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
NDRG1-222ENST00000522476 FGD5Q6ZNL6 1462 aa20.58■□□□□ 0.89
NDRG1-222ENST00000522476 KDM4FA0A1W2PPD8 638 aa20.58■□□□□ 0.88
NDRG1-222ENST00000522476 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.88
NDRG1-222ENST00000522476 CLIP1P30622 1438 aa20.56■□□□□ 0.88
NDRG1-222ENST00000522476 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.881e-8■■■■■ 31.9
NDRG1-222ENST00000522476 HRCP23327 699 aa20.55■□□□□ 0.88
NDRG1-222ENST00000522476 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
NDRG1-222ENST00000522476 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
NDRG1-222ENST00000522476 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
NDRG1-222ENST00000522476 IGF1RP08069 1367 aa20.45■□□□□ 0.86
NDRG1-222ENST00000522476 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms