RNA–Protein interactions for RNA: ENST00000409804.5

MTHFD2-203, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 5 BASIC

Gene MTHFD2, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-203ENST00000409804 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
MTHFD2-203ENST00000409804 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
MTHFD2-203ENST00000409804 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
MTHFD2-203ENST00000409804 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
MTHFD2-203ENST00000409804 ABCC9O60706 1549 aa18.06■□□□□ 0.48
MTHFD2-203ENST00000409804 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
MTHFD2-203ENST00000409804 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
MTHFD2-203ENST00000409804 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
MTHFD2-203ENST00000409804 NACADO15069 1562 aa17.53■□□□□ 0.4
MTHFD2-203ENST00000409804 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
MTHFD2-203ENST00000409804 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
MTHFD2-203ENST00000409804 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
MTHFD2-203ENST00000409804 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
MTHFD2-203ENST00000409804 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
MTHFD2-203ENST00000409804 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
MTHFD2-203ENST00000409804 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
MTHFD2-203ENST00000409804 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
MTHFD2-203ENST00000409804 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
MTHFD2-203ENST00000409804 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
MTHFD2-203ENST00000409804 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
MTHFD2-203ENST00000409804 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
MTHFD2-203ENST00000409804 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
MTHFD2-203ENST00000409804 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
MTHFD2-203ENST00000409804 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
MTHFD2-203ENST00000409804 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.2
MTHFD2-203ENST00000409804 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
MTHFD2-203ENST00000409804 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
MTHFD2-203ENST00000409804 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
MTHFD2-203ENST00000409804 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
MTHFD2-203ENST00000409804 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
MTHFD2-203ENST00000409804 WIZO95785 1651 aa16.16■□□□□ 0.18
MTHFD2-203ENST00000409804 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
MTHFD2-203ENST00000409804 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
MTHFD2-203ENST00000409804 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
MTHFD2-203ENST00000409804 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
MTHFD2-203ENST00000409804 TOP2AP11388 1531 aaKnown RBP16■□□□□ 0.15
MTHFD2-203ENST00000409804 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
MTHFD2-203ENST00000409804 FOXD1Q16676 465 aa15.75■□□□□ 0.11
MTHFD2-203ENST00000409804 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
MTHFD2-203ENST00000409804 NESP48681 1621 aa15.71■□□□□ 0.11
MTHFD2-203ENST00000409804 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
MTHFD2-203ENST00000409804 CFTRP13569 1480 aa15.68■□□□□ 0.1
MTHFD2-203ENST00000409804 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
MTHFD2-203ENST00000409804 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
MTHFD2-203ENST00000409804 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
MTHFD2-203ENST00000409804 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
MTHFD2-203ENST00000409804 KIF21AQ7Z4S6 1674 aa15.52■□□□□ 0.07
MTHFD2-203ENST00000409804 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
MTHFD2-203ENST00000409804 MRC2Q9UBG0 1479 aa15.41■□□□□ 0.06
MTHFD2-203ENST00000409804 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
MTHFD2-203ENST00000409804 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
MTHFD2-203ENST00000409804 WDR62O43379 1518 aa15.34■□□□□ 0.05
MTHFD2-203ENST00000409804 ABCC8Q09428 1581 aa15.33■□□□□ 0.05
MTHFD2-203ENST00000409804 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
MTHFD2-203ENST00000409804 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
MTHFD2-203ENST00000409804 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
MTHFD2-203ENST00000409804 CUX1P39880 1505 aa15.3■□□□□ 0.04
MTHFD2-203ENST00000409804 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
MTHFD2-203ENST00000409804 ADRA2BP18089 450 aa15.29■□□□□ 0.04
MTHFD2-203ENST00000409804 CUX2O14529 1486 aa15.28■□□□□ 0.04
MTHFD2-203ENST00000409804 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
MTHFD2-203ENST00000409804 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
MTHFD2-203ENST00000409804 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
MTHFD2-203ENST00000409804 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.02
MTHFD2-203ENST00000409804 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.02
MTHFD2-203ENST00000409804 HRCP23327 699 aa15.16■□□□□ 0.02
MTHFD2-203ENST00000409804 SOGA1O94964 1423 aa15.16■□□□□ 0.02
MTHFD2-203ENST00000409804 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
MTHFD2-203ENST00000409804 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
MTHFD2-203ENST00000409804 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
MTHFD2-203ENST00000409804 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
MTHFD2-203ENST00000409804 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
MTHFD2-203ENST00000409804 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
MTHFD2-203ENST00000409804 WDR97A6NE52 1622 aa15.05■□□□□ -0
MTHFD2-203ENST00000409804 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
MTHFD2-203ENST00000409804 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -09e-8■■■■■ 30.5
MTHFD2-203ENST00000409804 PELP1Q8IZL8 1130 aaKnown RBP15.02□□□□□ -0.01
MTHFD2-203ENST00000409804 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
MTHFD2-203ENST00000409804 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
MTHFD2-203ENST00000409804 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
MTHFD2-203ENST00000409804 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
MTHFD2-203ENST00000409804 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
MTHFD2-203ENST00000409804 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
MTHFD2-203ENST00000409804 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
MTHFD2-203ENST00000409804 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
MTHFD2-203ENST00000409804 ERICH3Q5RHP9 1530 aa14.9□□□□□ -0.02
MTHFD2-203ENST00000409804 IGF1RP08069 1367 aa14.89□□□□□ -0.03
MTHFD2-203ENST00000409804 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
MTHFD2-203ENST00000409804 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
MTHFD2-203ENST00000409804 EEA1Q15075 1411 aa14.86□□□□□ -0.03
MTHFD2-203ENST00000409804 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
MTHFD2-203ENST00000409804 FHAD1B1AJZ9 1412 aa14.82□□□□□ -0.04
MTHFD2-203ENST00000409804 FBLN2P98095 1184 aa14.82□□□□□ -0.04
MTHFD2-203ENST00000409804 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
MTHFD2-203ENST00000409804 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
MTHFD2-203ENST00000409804 ADAMTS12P58397 1594 aa14.82□□□□□ -0.04
MTHFD2-203ENST00000409804 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
MTHFD2-203ENST00000409804 CUL7Q14999 1698 aa14.81□□□□□ -0.04
MTHFD2-203ENST00000409804 CARMIL1Q5VZK9 1371 aa14.8□□□□□ -0.04
MTHFD2-203ENST00000409804 CHD1O14646 1710 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms