RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
MTHFD2-201ENST00000394053 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
MTHFD2-201ENST00000394053 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
MTHFD2-201ENST00000394053 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
MTHFD2-201ENST00000394053 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
MTHFD2-201ENST00000394053 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
MTHFD2-201ENST00000394053 TRIM41Q8WV44 630 aa16.97■□□□□ 0.31
MTHFD2-201ENST00000394053 ABCC9O60706 1549 aa16.96■□□□□ 0.31
MTHFD2-201ENST00000394053 APLP2Q06481 763 aa16.79■□□□□ 0.28
MTHFD2-201ENST00000394053 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
MTHFD2-201ENST00000394053 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
MTHFD2-201ENST00000394053 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
MTHFD2-201ENST00000394053 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
MTHFD2-201ENST00000394053 UBTFP17480 764 aaKnown RBP16.62■□□□□ 0.25
MTHFD2-201ENST00000394053 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
MTHFD2-201ENST00000394053 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
MTHFD2-201ENST00000394053 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
MTHFD2-201ENST00000394053 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
MTHFD2-201ENST00000394053 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
MTHFD2-201ENST00000394053 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
MTHFD2-201ENST00000394053 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
MTHFD2-201ENST00000394053 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
MTHFD2-201ENST00000394053 TRIM26Q12899 539 aaPredicted RBP16.12■□□□□ 0.17
MTHFD2-201ENST00000394053 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
MTHFD2-201ENST00000394053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.14
MTHFD2-201ENST00000394053 ITGAEP38570 1179 aa15.96■□□□□ 0.14
MTHFD2-201ENST00000394053 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.14
MTHFD2-201ENST00000394053 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
MTHFD2-201ENST00000394053 NACADO15069 1562 aa15.87■□□□□ 0.13
MTHFD2-201ENST00000394053 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.13
MTHFD2-201ENST00000394053 HRCP23327 699 aa15.8■□□□□ 0.12
MTHFD2-201ENST00000394053 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
MTHFD2-201ENST00000394053 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
MTHFD2-201ENST00000394053 FBLN2P98095 1184 aa15.71■□□□□ 0.11
MTHFD2-201ENST00000394053 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
MTHFD2-201ENST00000394053 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
MTHFD2-201ENST00000394053 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
MTHFD2-201ENST00000394053 CENPBP07199 599 aaPredicted RBP15.63■□□□□ 0.09
MTHFD2-201ENST00000394053 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
MTHFD2-201ENST00000394053 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
MTHFD2-201ENST00000394053 YTHDC1Q96MU7 727 aaKnown RBP15.55■□□□□ 0.08
MTHFD2-201ENST00000394053 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
MTHFD2-201ENST00000394053 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
MTHFD2-201ENST00000394053 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
MTHFD2-201ENST00000394053 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
MTHFD2-201ENST00000394053 POLR3GLQ9BT43 218 aa15.42■□□□□ 0.06
MTHFD2-201ENST00000394053 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
MTHFD2-201ENST00000394053 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
MTHFD2-201ENST00000394053 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
MTHFD2-201ENST00000394053 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
MTHFD2-201ENST00000394053 CNGB1Q14028 1251 aaPredicted RBP15.31■□□□□ 0.04
MTHFD2-201ENST00000394053 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
MTHFD2-201ENST00000394053 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
MTHFD2-201ENST00000394053 ZNF777Q9ULD5 760 aaPredicted RBP15.27■□□□□ 0.03
MTHFD2-201ENST00000394053 EEA1Q15075 1411 aa15.26■□□□□ 0.03
MTHFD2-201ENST00000394053 CLIP1P30622 1438 aa15.25■□□□□ 0.03
MTHFD2-201ENST00000394053 NEFLP07196 543 aa15.25■□□□□ 0.03
MTHFD2-201ENST00000394053 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
MTHFD2-201ENST00000394053 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
MTHFD2-201ENST00000394053 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
MTHFD2-201ENST00000394053 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
MTHFD2-201ENST00000394053 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
MTHFD2-201ENST00000394053 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
MTHFD2-201ENST00000394053 WIZO95785 1651 aa15.16■□□□□ 0.02
MTHFD2-201ENST00000394053 SOGA1O94964 1423 aa15.14■□□□□ 0.01
MTHFD2-201ENST00000394053 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
MTHFD2-201ENST00000394053 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
MTHFD2-201ENST00000394053 MTUS2Q5JR59 1369 aa15.1■□□□□ 0.01
MTHFD2-201ENST00000394053 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
MTHFD2-201ENST00000394053 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
MTHFD2-201ENST00000394053 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
MTHFD2-201ENST00000394053 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0.01
MTHFD2-201ENST00000394053 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
MTHFD2-201ENST00000394053 ATAD2BQ9ULI0 1458 aa15.05■□□□□ 0
MTHFD2-201ENST00000394053 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
MTHFD2-201ENST00000394053 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
MTHFD2-201ENST00000394053 ERCC6Q03468 1493 aa15.04■□□□□ -0
MTHFD2-201ENST00000394053 CUX2O14529 1486 aa15.03■□□□□ -0
MTHFD2-201ENST00000394053 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
MTHFD2-201ENST00000394053 CARMIL1Q5VZK9 1371 aa15□□□□□ -0.01
MTHFD2-201ENST00000394053 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
MTHFD2-201ENST00000394053 TSPY4P0CV99 314 aa14.96□□□□□ -0.02
MTHFD2-201ENST00000394053 TSPY10P0CW01 314 aa14.96□□□□□ -0.02
MTHFD2-201ENST00000394053 ANP32CO43423 234 aa14.95□□□□□ -0.02
MTHFD2-201ENST00000394053 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
MTHFD2-201ENST00000394053 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
MTHFD2-201ENST00000394053 PLEKHD1A6NEE1 506 aa14.93□□□□□ -0.02
MTHFD2-201ENST00000394053 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
MTHFD2-201ENST00000394053 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
MTHFD2-201ENST00000394053 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
MTHFD2-201ENST00000394053 ERICH6Q7L0X2 663 aa14.9□□□□□ -0.02
MTHFD2-201ENST00000394053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
MTHFD2-201ENST00000394053 CHGAP10645 457 aaKnown RBP14.83□□□□□ -0.04
MTHFD2-201ENST00000394053 CFDP1Q9UEE9 299 aaPredicted RBP14.83□□□□□ -0.04
MTHFD2-201ENST00000394053 BCANQ96GW7 911 aa14.8□□□□□ -0.04
MTHFD2-201ENST00000394053 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
MTHFD2-201ENST00000394053 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
MTHFD2-201ENST00000394053 ESF1Q9H501 851 aaKnown RBP14.8□□□□□ -0.04
MTHFD2-201ENST00000394053 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
MTHFD2-201ENST00000394053 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms