Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RPL35A-208ENST00000485439 677 ntTSL 27.51□□□□□ -1.213e-18■■■□□ 16.1
RPS3P23396 RPL35A-201ENST00000329092 456 ntTSL 35.26□□□□□ -1.573e-18■■■□□ 16.1
RPS3P23396 BIRC5-210ENST00000592115 1141 ntTSL 1 (best)19.13■□□□□ 0.653e-13■■■□□ 16.1
RPS3P23396 BIRC5-204ENST00000586192 524 ntTSL 1 (best)13.31□□□□□ -0.283e-13■■■□□ 16.1
RPS3P23396 BIRC5-205ENST00000587746 492 ntTSL 1 (best)13.31□□□□□ -0.283e-13■■■□□ 16.1
RPS3P23396 BIRC5-209ENST00000591800 496 ntTSL 1 (best)11.52□□□□□ -0.573e-13■■■□□ 16.1
RPS3P23396 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.827e-7■■■□□ 16.1
RPS3P23396 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.13□□□□□ -0.957e-7■■■□□ 16.1
RPS3P23396 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.047e-7■■■□□ 16.1
RPS3P23396 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.057e-7■■■□□ 16.1
RPS3P23396 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.45□□□□□ -1.067e-7■■■□□ 16.1
RPS3P23396 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.41□□□□□ -1.067e-7■■■□□ 16.1
RPS3P23396 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.41□□□□□ -1.067e-7■■■□□ 16.1
RPS3P23396 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.31□□□□□ -1.087e-7■■■□□ 16.1
RPS3P23396 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.17□□□□□ -1.17e-7■■■□□ 16.1
RPS3P23396 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.13□□□□□ -1.117e-7■■■□□ 16.1
RPS3P23396 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.11□□□□□ -1.117e-7■■■□□ 16.1
RPS3P23396 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.11□□□□□ -1.117e-7■■■□□ 16.1
RPS3P23396 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.08□□□□□ -1.127e-7■■■□□ 16.1
RPS3P23396 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.08□□□□□ -1.127e-7■■■□□ 16.1
RPS3P23396 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.08□□□□□ -1.127e-7■■■□□ 16.1
RPS3P23396 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.88□□□□□ -1.157e-7■■■□□ 16.1
RPS3P23396 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.77□□□□□ -1.177e-7■■■□□ 16.1
RPS3P23396 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.77□□□□□ -1.177e-7■■■□□ 16.1
RPS3P23396 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.77□□□□□ -1.177e-7■■■□□ 16.1
RPS3P23396 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.76□□□□□ -1.177e-7■■■□□ 16.1
RPS3P23396 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.64□□□□□ -1.197e-7■■■□□ 16.1
RPS3P23396 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.53□□□□□ -1.27e-7■■■□□ 16.1
RPS3P23396 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.53□□□□□ -1.27e-7■■■□□ 16.1
RPS3P23396 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.35□□□□□ -1.237e-7■■■□□ 16.1
RPS3P23396 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.17□□□□□ -1.267e-7■■■□□ 16.1
RPS3P23396 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.17□□□□□ -1.267e-7■■■□□ 16.1
RPS3P23396 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.99□□□□□ -1.297e-7■■■□□ 16.1
RPS3P23396 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.72□□□□□ -1.337e-7■■■□□ 16.1
RPS3P23396 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.6□□□□□ -1.357e-7■■■□□ 16.1
RPS3P23396 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.6□□□□□ -1.357e-7■■■□□ 16.1
RPS3P23396 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.8□□□□□ -0.22e-10■■■□□ 16.1
RPS3P23396 UQCRQ-204ENST00000480372 509 ntTSL 218.44■□□□□ 0.545e-20■■■□□ 16.1
RPS3P23396 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.535e-20■■■□□ 16.1
RPS3P23396 UQCRQ-206ENST00000498309 874 ntTSL 216.32■□□□□ 0.25e-20■■■□□ 16.1
RPS3P23396 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.165e-20■■■□□ 16.1
RPS3P23396 UQCRQ-202ENST00000378667 429 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.695e-20■■■□□ 16.1
RPS3P23396 UQCRQ-205ENST00000496429 258 ntTSL 27.41□□□□□ -1.225e-20■■■□□ 16.1
RPS3P23396 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.774e-7■■■□□ 16.1
RPS3P23396 LITAF-212ENST00000573332 773 ntTSL 416.96■□□□□ 0.314e-7■■■□□ 16.1
RPS3P23396 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.81■□□□□ 0.284e-7■■■□□ 16.1
RPS3P23396 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.264e-7■■■□□ 16.1
RPS3P23396 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.67■□□□□ 0.264e-7■■■□□ 16.1
RPS3P23396 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.184e-7■■■□□ 16.1
RPS3P23396 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.154e-7■■■□□ 16.1
RPS3P23396 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.054e-7■■■□□ 16.1
RPS3P23396 LITAF-208ENST00000571627 579 ntTSL 414.09□□□□□ -0.154e-7■■■□□ 16.1
RPS3P23396 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.77□□□□□ -0.374e-7■■■□□ 16.1
RPS3P23396 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.54e-7■■■□□ 16.1
RPS3P23396 LITAF-207ENST00000571459 677 ntTSL 5 BASIC10.08□□□□□ -0.84e-7■■■□□ 16.1
RPS3P23396 CPVL-207ENST00000448959 874 ntTSL 211.74□□□□□ -0.536e-7■■■□□ 16.1
RPS3P23396 TFRC-208ENST00000464011 546 ntTSL 49.38□□□□□ -0.917e-9■■■□□ 16.1
RPS3P23396 CCT5-211ENST00000512975 578 ntTSL 46.29□□□□□ -1.45e-14■■■□□ 16.1
RPS3P23396 FLNA-218ENST00000498491 914 ntTSL 517.13■□□□□ 0.331e-6■■■□□ 16.1
RPS3P23396 FLNA-210ENST00000462590 1026 ntTSL 1 (best)13.86□□□□□ -0.191e-6■■■□□ 16.1
RPS3P23396 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.6■□□□□ 0.251e-6■■■□□ 16.1
RPS3P23396 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.131e-6■■■□□ 16.1
RPS3P23396 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.781e-6■■■□□ 16.1
RPS3P23396 AMN-202ENST00000541086 2269 ntTSL 222.51■■□□□ 1.191e-6■■■□□ 16.1
RPS3P23396 SLC3A2-212ENST00000538682 1368 ntTSL 1 (best)14.47□□□□□ -0.096e-7■■■□□ 16.1
RPS3P23396 P3H4-205ENST00000484247 1866 ntTSL 215.01□□□□□ -0.013e-6■■■□□ 16.1
RPS3P23396 P3H4-203ENST00000465097 571 ntTSL 514.28□□□□□ -0.123e-6■■■□□ 16.1
RPS3P23396 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.392e-7■■■□□ 16.1
RPS3P23396 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31e-8■■■□□ 16.1
RPS3P23396 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.211e-8■■■□□ 16.1
RPS3P23396 KHSRP-205ENST00000595223 956 ntTSL 516.94■□□□□ 0.31e-8■■■□□ 16.1
RPS3P23396 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.523e-10■■■□□ 16.1
RPS3P23396 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.33e-10■■■□□ 16.1
RPS3P23396 CFL1-210ENST00000530945 1509 ntTSL 216.68■□□□□ 0.263e-10■■■□□ 16.1
RPS3P23396 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.13□□□□□ -0.153e-10■■■□□ 16.1
RPS3P23396 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.36□□□□□ -0.273e-10■■■□□ 16.1
RPS3P23396 CFL1-207ENST00000527752 766 ntTSL 511.15□□□□□ -0.623e-10■■■□□ 16.1
RPS3P23396 NDRG1-224ENST00000522738 530 ntTSL 510.82□□□□□ -0.681e-7■■■□□ 16.1
RPS3P23396 SLC39A14-207ENST00000518348 1086 ntTSL 211.17□□□□□ -0.626e-14■■■□□ 16.1
RPS3P23396 ICAM1-203ENST00000585443 560 ntTSL 513.39□□□□□ -0.277e-12■■■□□ 16.1
RPS3P23396 CTSB-215ENST00000528965 556 ntTSL 314.97□□□□□ -0.017e-9■■■□□ 16.1
RPS3P23396 ETFA-210ENST00000559973 804 ntTSL 37.52□□□□□ -1.212e-7■■■□□ 16.1
RPS3P23396 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.612e-10■■■□□ 16.1
RPS3P23396 PAM-221ENST00000510208 824 ntTSL 224.39■■□□□ 1.491e-7■■■□□ 16.1
RPS3P23396 LRRC8D-205ENST00000525774 588 ntTSL 423.4■■□□□ 1.341e-7■■■□□ 16.1
RPS3P23396 ICMT-202ENST00000474756 1227 ntTSL 222.98■■□□□ 1.271e-7■■■□□ 16.1
RPS3P23396 TMEM70-207ENST00000523794 761 ntTSL 321.17■□□□□ 0.981e-7■■■□□ 16.1
RPS3P23396 PAM-225ENST00000512073 575 ntTSL 420.9■□□□□ 0.941e-7■■■□□ 16.1
RPS3P23396 TMEM70-204ENST00000517614 539 ntTSL 220.66■□□□□ 0.91e-7■■■□□ 16.1
RPS3P23396 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.66■□□□□ 0.91e-7■■■□□ 16.1
RPS3P23396 EDEM3-206ENST00000474725 1911 ntTSL 220.09■□□□□ 0.811e-7■■■□□ 16.1
RPS3P23396 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.651e-7■■■□□ 16.1
RPS3P23396 SURF1-202ENST00000437995 813 ntTSL 518.99■□□□□ 0.631e-7■■■□□ 16.1
RPS3P23396 TMEM70-202ENST00000416961 928 ntTSL 218.94■□□□□ 0.621e-7■■■□□ 16.1
RPS3P23396 EVA1A-209ENST00000486489 524 ntTSL 218.88■□□□□ 0.611e-7■■■□□ 16.1
RPS3P23396 PAM-223ENST00000511477 528 ntTSL 418.65■□□□□ 0.581e-7■■■□□ 16.1
RPS3P23396 MBOAT7-213ENST00000495279 1585 ntTSL 218.6■□□□□ 0.571e-7■■■□□ 16.1
RPS3P23396 PAM-226ENST00000513648 1099 ntTSL 218.35■□□□□ 0.531e-7■■■□□ 16.1
RPS3P23396 PAM-224ENST00000511839 609 ntTSL 418.29■□□□□ 0.521e-7■■■□□ 16.1
RPS3P23396 PAM-212ENST00000505654 570 ntTSL 417.98■□□□□ 0.471e-7■■■□□ 16.1
Retrieved 100 of 24,271 protein–RNA pairs in 256.3 ms