RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
SURF1-202ENST00000437995 CCDC180Q9P1Z9 1646 aa42.48■■■■■ 4.39
SURF1-202ENST00000437995 ABCC9O60706 1549 aa41.69■■■■■ 4.27
SURF1-202ENST00000437995 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
SURF1-202ENST00000437995 NACADO15069 1562 aa39.97■■■■□ 3.99
SURF1-202ENST00000437995 DCAF8L2P0C7V8 631 aa39.87■■■■□ 3.97
SURF1-202ENST00000437995 ZCCHC6Q5VYS8 1495 aaKnown RBP39.7■■■■□ 3.95
SURF1-202ENST00000437995 MYO15BQ96JP2 1530 aa39.69■■■■□ 3.94
SURF1-202ENST00000437995 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
SURF1-202ENST00000437995 UNC13AQ9UPW8 1703 aa39.13■■■■□ 3.85
SURF1-202ENST00000437995 PABPN1Q86U42 306 aaKnown RBP eCLIP38.91■■■■□ 3.82
SURF1-202ENST00000437995 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
SURF1-202ENST00000437995 SCRIBQ14160 1630 aa38.74■■■■□ 3.79
SURF1-202ENST00000437995 SHROOM4Q9ULL8 1493 aa38.44■■■■□ 3.74
SURF1-202ENST00000437995 DNAJC5BQ9UF47 199 aa38.38■■■■□ 3.73
SURF1-202ENST00000437995 EIF4G1Q04637 1599 aaKnown RBP37.83■■■■□ 3.65
SURF1-202ENST00000437995 CC2D2AQ9P2K1 1620 aa37.71■■■■□ 3.63
SURF1-202ENST00000437995 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
SURF1-202ENST00000437995 SMARCA4P51532 1647 aa37.04■■■■□ 3.52
SURF1-202ENST00000437995 BAZ1AQ9NRL2 1556 aaPredicted RBP36.98■■■■□ 3.51
SURF1-202ENST00000437995 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
SURF1-202ENST00000437995 ATAD2BQ9ULI0 1458 aa36.88■■■■□ 3.49
SURF1-202ENST00000437995 SMARCA2P51531 1590 aa36.83■■■■□ 3.49
SURF1-202ENST00000437995 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
SURF1-202ENST00000437995 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
SURF1-202ENST00000437995 PEG3Q9GZU2 1588 aa36.68■■■■□ 3.46
SURF1-202ENST00000437995 BAZ1BQ9UIG0 1483 aaKnown RBP36.56■■■■□ 3.44
SURF1-202ENST00000437995 WIZO95785 1651 aa36.34■■■■□ 3.41
SURF1-202ENST00000437995 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.4
SURF1-202ENST00000437995 NESP48681 1621 aa36.03■■■■□ 3.36
SURF1-202ENST00000437995 ERCC6Q03468 1493 aa35.96■■■■□ 3.35
SURF1-202ENST00000437995 TOP2AP11388 1531 aaKnown RBP35.96■■■■□ 3.35
SURF1-202ENST00000437995 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
SURF1-202ENST00000437995 CADPSQ9ULU8 1353 aa35.78■■■■□ 3.32
SURF1-202ENST00000437995 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
SURF1-202ENST00000437995 CUX2O14529 1486 aa35.64■■■■□ 3.3
SURF1-202ENST00000437995 KIF21AQ7Z4S6 1674 aa35.61■■■■□ 3.29
SURF1-202ENST00000437995 CFTRP13569 1480 aa35.54■■■■□ 3.28
SURF1-202ENST00000437995 THOC2Q8NI27 1593 aaKnown RBP35.54■■■■□ 3.28
SURF1-202ENST00000437995 CCDC88BA6NC98 1476 aa35.52■■■■□ 3.28
SURF1-202ENST00000437995 FANCD2Q9BXW9 1451 aa35.38■■■■□ 3.25
SURF1-202ENST00000437995 CEP164Q9UPV0 1460 aa35.36■■■■□ 3.25
SURF1-202ENST00000437995 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
SURF1-202ENST00000437995 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
SURF1-202ENST00000437995 WDR62O43379 1518 aa35.23■■■■□ 3.23
SURF1-202ENST00000437995 SUPT5HO00267 1087 aaKnown RBP35.21■■■■□ 3.23
SURF1-202ENST00000437995 URB2Q14146 1524 aaKnown RBP35.04■■■■□ 3.2
SURF1-202ENST00000437995 TOPBP1Q92547 1522 aa34.81■■■■□ 3.16
SURF1-202ENST00000437995 ABCC8Q09428 1581 aa34.79■■■■□ 3.16
SURF1-202ENST00000437995 DNMBPQ6XZF7 1577 aa34.76■■■■□ 3.16
SURF1-202ENST00000437995 DNAJC5Q9H3Z4 198 aa34.7■■■■□ 3.15
SURF1-202ENST00000437995 IFT140Q96RY7 1462 aa34.62■■■■□ 3.13
SURF1-202ENST00000437995 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
SURF1-202ENST00000437995 CUX1P39880 1505 aa34.49■■■■□ 3.11
SURF1-202ENST00000437995 ZNF608Q9ULD9 1512 aaPredicted RBP34.47■■■■□ 3.11
SURF1-202ENST00000437995 TARBP1Q13395 1621 aaKnown RBP34.43■■■■□ 3.1
SURF1-202ENST00000437995 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
SURF1-202ENST00000437995 SOGA1O94964 1423 aa34.35■■■■□ 3.09
SURF1-202ENST00000437995 EIF4G3O43432 1585 aaKnown RBP34.35■■■■□ 3.09
SURF1-202ENST00000437995 RAD54L2Q9Y4B4 1467 aa34.34■■■■□ 3.09
SURF1-202ENST00000437995 AQRO60306 1485 aaKnown RBP eCLIP34.26■■■■□ 3.07
SURF1-202ENST00000437995 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
SURF1-202ENST00000437995 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
SURF1-202ENST00000437995 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
SURF1-202ENST00000437995 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
SURF1-202ENST00000437995 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
SURF1-202ENST00000437995 SYNJ1O43426 1573 aa34.13■■■■□ 3.05
SURF1-202ENST00000437995 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
SURF1-202ENST00000437995 ABCA10Q8WWZ4 1543 aa34.05■■■■□ 3.04
SURF1-202ENST00000437995 GRIN2BQ13224 1484 aa33.98■■■■□ 3.03
SURF1-202ENST00000437995 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.03
SURF1-202ENST00000437995 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.03
SURF1-202ENST00000437995 CHD1O14646 1710 aa33.94■■■■□ 3.02
SURF1-202ENST00000437995 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
SURF1-202ENST00000437995 MAGI1Q96QZ7 1491 aaPredicted RBP33.91■■■■□ 3.02
SURF1-202ENST00000437995 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
SURF1-202ENST00000437995 FBLN2P98095 1184 aa33.86■■■■□ 3.01
SURF1-202ENST00000437995 SYNJ2O15056 1496 aa33.77■■■■□ 3
SURF1-202ENST00000437995 CHMP7Q8WUX9 453 aaPredicted RBP33.76■■■□□ 2.99
SURF1-202ENST00000437995 ERICH3Q5RHP9 1530 aa33.65■■■□□ 2.98
SURF1-202ENST00000437995 ADAMTS12P58397 1594 aa33.63■■■□□ 2.97
SURF1-202ENST00000437995 RIMBP3CA6NJZ7 1639 aa33.6■■■□□ 2.97
SURF1-202ENST00000437995 RIMBP3BA6NNM3 1639 aa33.6■■■□□ 2.97
SURF1-202ENST00000437995 RIMBP3Q9UFD9 1639 aa33.6■■■□□ 2.97
SURF1-202ENST00000437995 ARHGEF11O15085 1522 aa33.58■■■□□ 2.97
SURF1-202ENST00000437995 CLASP1Q7Z460 1538 aa33.57■■■□□ 2.96
SURF1-202ENST00000437995 FHAD1B1AJZ9 1412 aa33.56■■■□□ 2.96
SURF1-202ENST00000437995 GRIN2AQ12879 1464 aa33.54■■■□□ 2.96
SURF1-202ENST00000437995 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
SURF1-202ENST00000437995 TRIM41Q8WV44 630 aa33.5■■■□□ 2.95
SURF1-202ENST00000437995 NUP160Q12769 1436 aa33.4■■■□□ 2.94
SURF1-202ENST00000437995 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
SURF1-202ENST00000437995 IGF1RP08069 1367 aa33.37■■■□□ 2.93
SURF1-202ENST00000437995 CUL7Q14999 1698 aa33.33■■■□□ 2.93
SURF1-202ENST00000437995 ARAP1Q96P48 1450 aa33.31■■■□□ 2.92
SURF1-202ENST00000437995 CYB5RLQ6IPT4 315 aa33.25■■■□□ 2.91
SURF1-202ENST00000437995 CARMIL1Q5VZK9 1371 aa33.19■■■□□ 2.9
SURF1-202ENST00000437995 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
SURF1-202ENST00000437995 RUSC2Q8N2Y8 1516 aa33.13■■■□□ 2.89
SURF1-202ENST00000437995 ERCC6L2Q5T890 1561 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms