RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
LITAF-207ENST00000571459 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
LITAF-207ENST00000571459 ABCC9O60706 1549 aa21.14■□□□□ 0.97
LITAF-207ENST00000571459 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
LITAF-207ENST00000571459 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
LITAF-207ENST00000571459 NACADO15069 1562 aa20.38■□□□□ 0.85
LITAF-207ENST00000571459 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
LITAF-207ENST00000571459 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
LITAF-207ENST00000571459 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
LITAF-207ENST00000571459 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
LITAF-207ENST00000571459 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
LITAF-207ENST00000571459 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
LITAF-207ENST00000571459 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
LITAF-207ENST00000571459 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
LITAF-207ENST00000571459 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
LITAF-207ENST00000571459 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
LITAF-207ENST00000571459 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
LITAF-207ENST00000571459 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
LITAF-207ENST00000571459 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
LITAF-207ENST00000571459 SMARCA4P51532 1647 aa19■□□□□ 0.63
LITAF-207ENST00000571459 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
LITAF-207ENST00000571459 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
LITAF-207ENST00000571459 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
LITAF-207ENST00000571459 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
LITAF-207ENST00000571459 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
LITAF-207ENST00000571459 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
LITAF-207ENST00000571459 WIZO95785 1651 aa18.74■□□□□ 0.59
LITAF-207ENST00000571459 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
LITAF-207ENST00000571459 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
LITAF-207ENST00000571459 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
LITAF-207ENST00000571459 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
LITAF-207ENST00000571459 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
LITAF-207ENST00000571459 NESP48681 1621 aa18.34■□□□□ 0.53
LITAF-207ENST00000571459 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
LITAF-207ENST00000571459 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
LITAF-207ENST00000571459 CFTRP13569 1480 aa18.2■□□□□ 0.5
LITAF-207ENST00000571459 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
LITAF-207ENST00000571459 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
LITAF-207ENST00000571459 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
LITAF-207ENST00000571459 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
LITAF-207ENST00000571459 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
LITAF-207ENST00000571459 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
LITAF-207ENST00000571459 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
LITAF-207ENST00000571459 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
LITAF-207ENST00000571459 CUX2O14529 1486 aa17.89■□□□□ 0.45
LITAF-207ENST00000571459 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
LITAF-207ENST00000571459 WDR62O43379 1518 aa17.88■□□□□ 0.45
LITAF-207ENST00000571459 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
LITAF-207ENST00000571459 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
LITAF-207ENST00000571459 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
LITAF-207ENST00000571459 CUX1P39880 1505 aa17.74■□□□□ 0.43
LITAF-207ENST00000571459 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
LITAF-207ENST00000571459 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
LITAF-207ENST00000571459 FGD5Q6ZNL6 1462 aa17.65■□□□□ 0.42
LITAF-207ENST00000571459 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
LITAF-207ENST00000571459 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
LITAF-207ENST00000571459 SOGA1O94964 1423 aa17.63■□□□□ 0.41
LITAF-207ENST00000571459 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
LITAF-207ENST00000571459 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
LITAF-207ENST00000571459 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
LITAF-207ENST00000571459 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
LITAF-207ENST00000571459 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
LITAF-207ENST00000571459 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
LITAF-207ENST00000571459 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.392e-8■■■□□ 18.1
LITAF-207ENST00000571459 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
LITAF-207ENST00000571459 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
LITAF-207ENST00000571459 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
LITAF-207ENST00000571459 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
LITAF-207ENST00000571459 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
LITAF-207ENST00000571459 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
LITAF-207ENST00000571459 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
LITAF-207ENST00000571459 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
LITAF-207ENST00000571459 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
LITAF-207ENST00000571459 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
LITAF-207ENST00000571459 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
LITAF-207ENST00000571459 FBLN2P98095 1184 aa17.32■□□□□ 0.36
LITAF-207ENST00000571459 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
LITAF-207ENST00000571459 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
LITAF-207ENST00000571459 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
LITAF-207ENST00000571459 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
LITAF-207ENST00000571459 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
LITAF-207ENST00000571459 CHD1O14646 1710 aa17.25■□□□□ 0.35
LITAF-207ENST00000571459 IGF1RP08069 1367 aa17.25■□□□□ 0.35
LITAF-207ENST00000571459 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
LITAF-207ENST00000571459 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
LITAF-207ENST00000571459 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
LITAF-207ENST00000571459 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
LITAF-207ENST00000571459 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
LITAF-207ENST00000571459 CUL7Q14999 1698 aa17.14■□□□□ 0.33
LITAF-207ENST00000571459 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
LITAF-207ENST00000571459 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
LITAF-207ENST00000571459 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
LITAF-207ENST00000571459 EEA1Q15075 1411 aa17.09■□□□□ 0.33
LITAF-207ENST00000571459 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
LITAF-207ENST00000571459 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
LITAF-207ENST00000571459 NUP160Q12769 1436 aa17.04■□□□□ 0.32
LITAF-207ENST00000571459 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
LITAF-207ENST00000571459 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
LITAF-207ENST00000571459 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
LITAF-207ENST00000571459 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms