RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
LITAF-202ENST00000381810 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
LITAF-202ENST00000381810 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
LITAF-202ENST00000381810 DCAF1Q9Y4B6 1507 aa31.28■■■□□ 2.6
LITAF-202ENST00000381810 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
LITAF-202ENST00000381810 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
LITAF-202ENST00000381810 ABCC9O60706 1549 aa30.85■■■□□ 2.53
LITAF-202ENST00000381810 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
LITAF-202ENST00000381810 NACADO15069 1562 aa30.57■■■□□ 2.48
LITAF-202ENST00000381810 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
LITAF-202ENST00000381810 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
LITAF-202ENST00000381810 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.38
LITAF-202ENST00000381810 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
LITAF-202ENST00000381810 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
LITAF-202ENST00000381810 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
LITAF-202ENST00000381810 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
LITAF-202ENST00000381810 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
LITAF-202ENST00000381810 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
LITAF-202ENST00000381810 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
LITAF-202ENST00000381810 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
LITAF-202ENST00000381810 WIZO95785 1651 aa29.05■■■□□ 2.24
LITAF-202ENST00000381810 CHIC1Q5VXU3 224 aa28.82■■■□□ 2.2
LITAF-202ENST00000381810 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
LITAF-202ENST00000381810 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
LITAF-202ENST00000381810 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
LITAF-202ENST00000381810 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
LITAF-202ENST00000381810 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
LITAF-202ENST00000381810 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
LITAF-202ENST00000381810 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
LITAF-202ENST00000381810 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
LITAF-202ENST00000381810 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
LITAF-202ENST00000381810 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
LITAF-202ENST00000381810 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.07
LITAF-202ENST00000381810 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
LITAF-202ENST00000381810 LOC105371045A0A1W2PR82 267 aa27.72■■■□□ 2.03
LITAF-202ENST00000381810 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
LITAF-202ENST00000381810 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.02
LITAF-202ENST00000381810 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
LITAF-202ENST00000381810 CFTRP13569 1480 aa27.63■■■□□ 2.01
LITAF-202ENST00000381810 SYNJ1O43426 1573 aa27.61■■■□□ 2.01
LITAF-202ENST00000381810 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
LITAF-202ENST00000381810 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
LITAF-202ENST00000381810 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
LITAF-202ENST00000381810 EEA1Q15075 1411 aa27.44■■□□□ 1.98
LITAF-202ENST00000381810 SOGA1O94964 1423 aa27.42■■□□□ 1.98
LITAF-202ENST00000381810 CUX1P39880 1505 aa27.33■■□□□ 1.97
LITAF-202ENST00000381810 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
LITAF-202ENST00000381810 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
LITAF-202ENST00000381810 EHMT2Q96KQ7 1210 aa27.24■■□□□ 1.95
LITAF-202ENST00000381810 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
LITAF-202ENST00000381810 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
LITAF-202ENST00000381810 NESP48681 1621 aa27.16■■□□□ 1.94
LITAF-202ENST00000381810 KIF21BO75037 1637 aa27.11■■□□□ 1.93
LITAF-202ENST00000381810 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
LITAF-202ENST00000381810 GOLGA3Q08378 1498 aa27.08■■□□□ 1.93
LITAF-202ENST00000381810 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
LITAF-202ENST00000381810 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
LITAF-202ENST00000381810 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
LITAF-202ENST00000381810 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
LITAF-202ENST00000381810 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
LITAF-202ENST00000381810 PDS5BQ9NTI5 1447 aa26.95■■□□□ 1.91
LITAF-202ENST00000381810 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
LITAF-202ENST00000381810 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
LITAF-202ENST00000381810 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
LITAF-202ENST00000381810 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
LITAF-202ENST00000381810 RAPGEF2Q9Y4G8 1499 aa26.87■■□□□ 1.89
LITAF-202ENST00000381810 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
LITAF-202ENST00000381810 CUX2O14529 1486 aa26.86■■□□□ 1.89
LITAF-202ENST00000381810 PRXQ9BXM0 1461 aa26.86■■□□□ 1.89
LITAF-202ENST00000381810 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
LITAF-202ENST00000381810 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
LITAF-202ENST00000381810 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
LITAF-202ENST00000381810 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
LITAF-202ENST00000381810 PCGF6Q9BYE7 350 aa26.71■■□□□ 1.87
LITAF-202ENST00000381810 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
LITAF-202ENST00000381810 IGF1RP08069 1367 aa26.69■■□□□ 1.86
LITAF-202ENST00000381810 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
LITAF-202ENST00000381810 CLIP1P30622 1438 aa26.64■■□□□ 1.85
LITAF-202ENST00000381810 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
LITAF-202ENST00000381810 CARMIL1Q5VZK9 1371 aa26.57■■□□□ 1.84
LITAF-202ENST00000381810 ABCA5Q8WWZ7 1642 aa26.55■■□□□ 1.84
LITAF-202ENST00000381810 CUL7Q14999 1698 aa26.53■■□□□ 1.84
LITAF-202ENST00000381810 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
LITAF-202ENST00000381810 WDR62O43379 1518 aa26.49■■□□□ 1.83
LITAF-202ENST00000381810 VPS8Q8N3P4 1428 aa26.45■■□□□ 1.82
LITAF-202ENST00000381810 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
LITAF-202ENST00000381810 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
LITAF-202ENST00000381810 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
LITAF-202ENST00000381810 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
LITAF-202ENST00000381810 RANGAP1P46060 587 aaPredicted RBP26.39■■□□□ 1.82
LITAF-202ENST00000381810 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
LITAF-202ENST00000381810 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
LITAF-202ENST00000381810 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
LITAF-202ENST00000381810 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
LITAF-202ENST00000381810 CTTNBP2Q8WZ74 1663 aa26.31■■□□□ 1.8
LITAF-202ENST00000381810 ARHGAP35Q9NRY4 1499 aa26.31■■□□□ 1.8
LITAF-202ENST00000381810 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.792e-8■■■□□ 18.1
LITAF-202ENST00000381810 GRIN2BQ13224 1484 aa26.19■■□□□ 1.78
LITAF-202ENST00000381810 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
LITAF-202ENST00000381810 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms