RNA–Protein interactions for RNA: ENST00000541086.5

AMN-202, Transcript of amnion associated transmembrane protein, humanhuman

TSL 2

Gene AMN, Length 2,269 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMN-202ENST00000541086 NISCHQ9Y2I1 1504 aa49.11■■■■■ 5.45
AMN-202ENST00000541086 CCDC180Q9P1Z9 1646 aa42.22■■■■■ 4.35
AMN-202ENST00000541086 ZCCHC6Q5VYS8 1495 aaKnown RBP41.44■■■■■ 4.23
AMN-202ENST00000541086 SHROOM4Q9ULL8 1493 aa41.11■■■■■ 4.17
AMN-202ENST00000541086 DCAF8L2P0C7V8 631 aa40.54■■■■■ 4.08
AMN-202ENST00000541086 DCAF1Q9Y4B6 1507 aa40.43■■■■■ 4.06
AMN-202ENST00000541086 SUPT5HO00267 1087 aaKnown RBP40.02■■■■■ 4
AMN-202ENST00000541086 MYO15BQ96JP2 1530 aa39.53■■■■□ 3.92
AMN-202ENST00000541086 ABCC9O60706 1549 aa39.32■■■■□ 3.88
AMN-202ENST00000541086 SCRIBQ14160 1630 aa39.23■■■■□ 3.87
AMN-202ENST00000541086 NACADO15069 1562 aa39.1■■■■□ 3.85
AMN-202ENST00000541086 CHIC1Q5VXU3 224 aa38.72■■■■□ 3.79
AMN-202ENST00000541086 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.77
AMN-202ENST00000541086 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
AMN-202ENST00000541086 CECR2Q9BXF3 1484 aa38.22■■■■□ 3.71
AMN-202ENST00000541086 MROH2BQ7Z745 1585 aa38.08■■■■□ 3.69
AMN-202ENST00000541086 UNC13AQ9UPW8 1703 aa37.99■■■■□ 3.67
AMN-202ENST00000541086 WIZO95785 1651 aa37.87■■■■□ 3.65
AMN-202ENST00000541086 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
AMN-202ENST00000541086 SMARCA4P51532 1647 aa37.56■■■■□ 3.6
AMN-202ENST00000541086 BICRAQ9NZM4 1560 aa37.5■■■■□ 3.59
AMN-202ENST00000541086 TRIM41Q8WV44 630 aa37.43■■■■□ 3.58
AMN-202ENST00000541086 LOC105371045A0A1W2PR82 267 aa37.42■■■■□ 3.58
AMN-202ENST00000541086 PABPN1Q86U42 306 aaKnown RBP eCLIP37.36■■■■□ 3.575e-8■■■■□ 23.3
AMN-202ENST00000541086 TOP2AP11388 1531 aaKnown RBP37.34■■■■□ 3.57
AMN-202ENST00000541086 EIF4G1Q04637 1599 aaKnown RBP37.18■■■■□ 3.54
AMN-202ENST00000541086 SMARCA2P51531 1590 aa37.09■■■■□ 3.53
AMN-202ENST00000541086 CCDC88BA6NC98 1476 aa37.07■■■■□ 3.53
AMN-202ENST00000541086 FAM9AQ8IZU1 332 aaPredicted RBP36.95■■■■□ 3.51
AMN-202ENST00000541086 PEG3Q9GZU2 1588 aa36.94■■■■□ 3.5
AMN-202ENST00000541086 HRCP23327 699 aa36.91■■■■□ 3.5
AMN-202ENST00000541086 PCGF6Q9BYE7 350 aa36.78■■■■□ 3.48
AMN-202ENST00000541086 ABCC8Q09428 1581 aa36.73■■■■□ 3.47
AMN-202ENST00000541086 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
AMN-202ENST00000541086 BAZ1BQ9UIG0 1483 aaKnown RBP36.55■■■■□ 3.44
AMN-202ENST00000541086 EHMT2Q96KQ7 1210 aa36.54■■■■□ 3.44
AMN-202ENST00000541086 TRIM26Q12899 539 aaPredicted RBP36.36■■■■□ 3.41
AMN-202ENST00000541086 WRNQ14191 1432 aaPredicted RBP eCLIP36.24■■■■□ 3.39
AMN-202ENST00000541086 SOGA1O94964 1423 aa36.23■■■■□ 3.39
AMN-202ENST00000541086 HMGXB3Q12766 1538 aa36.14■■■■□ 3.38
AMN-202ENST00000541086 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
AMN-202ENST00000541086 EEA1Q15075 1411 aa36.11■■■■□ 3.37
AMN-202ENST00000541086 SYNJ1O43426 1573 aa36.11■■■■□ 3.37
AMN-202ENST00000541086 RUSC2Q8N2Y8 1516 aa36.07■■■■□ 3.37
AMN-202ENST00000541086 CSRNP3Q8WYN3 585 aa35.98■■■■□ 3.35
AMN-202ENST00000541086 PPARGC1BQ86YN6 1023 aaKnown RBP35.94■■■■□ 3.34
AMN-202ENST00000541086 TNIKQ9UKE5 1360 aa35.85■■■■□ 3.33
AMN-202ENST00000541086 CEP162Q5TB80 1403 aa35.82■■■■□ 3.32
AMN-202ENST00000541086 TOP2BQ02880 1626 aa35.79■■■■□ 3.32
AMN-202ENST00000541086 GOLGA3Q08378 1498 aa35.78■■■■□ 3.32
AMN-202ENST00000541086 BIVM-ERCC5R4GMW8 1640 aa35.72■■■■□ 3.31
AMN-202ENST00000541086 UBTFP17480 764 aaKnown RBP35.71■■■■□ 3.31
AMN-202ENST00000541086 KIF21BO75037 1637 aa35.68■■■■□ 3.3
AMN-202ENST00000541086 CEP164Q9UPV0 1460 aa35.66■■■■□ 3.3
AMN-202ENST00000541086 CFTRP13569 1480 aa35.64■■■■□ 3.3
AMN-202ENST00000541086 CC2D2AQ9P2K1 1620 aa35.52■■■■□ 3.28
AMN-202ENST00000541086 CUX1P39880 1505 aa35.52■■■■□ 3.28
AMN-202ENST00000541086 PRDM2Q13029 1718 aa35.5■■■■□ 3.27
AMN-202ENST00000541086 ZEB1P37275 1124 aaPredicted RBP35.42■■■■□ 3.26
AMN-202ENST00000541086 RAPGEF2Q9Y4G8 1499 aa35.41■■■■□ 3.26
AMN-202ENST00000541086 CADPSQ9ULU8 1353 aa35.33■■■■□ 3.25
AMN-202ENST00000541086 CLIP1P30622 1438 aa35.29■■■■□ 3.24
AMN-202ENST00000541086 TTBK1Q5TCY1 1321 aaPredicted RBP35.23■■■■□ 3.23
AMN-202ENST00000541086 PRXQ9BXM0 1461 aa35.22■■■■□ 3.23
AMN-202ENST00000541086 ERICH3Q5RHP9 1530 aa35.22■■■■□ 3.23
AMN-202ENST00000541086 KIF27Q86VH2 1401 aa35.2■■■■□ 3.22
AMN-202ENST00000541086 VPS8Q8N3P4 1428 aa35.09■■■■□ 3.21
AMN-202ENST00000541086 RANGAP1P46060 587 aaPredicted RBP35.02■■■■□ 3.2
AMN-202ENST00000541086 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
AMN-202ENST00000541086 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
AMN-202ENST00000541086 CUX2O14529 1486 aa34.95■■■■□ 3.19
AMN-202ENST00000541086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.92■■■■□ 3.18
AMN-202ENST00000541086 NESP48681 1621 aa34.86■■■■□ 3.17
AMN-202ENST00000541086 CCER1Q8TC90 406 aaPredicted RBP34.83■■■■□ 3.17
AMN-202ENST00000541086 ARAP1Q96P48 1450 aa34.83■■■■□ 3.17
AMN-202ENST00000541086 IGF1RP08069 1367 aa34.82■■■■□ 3.16
AMN-202ENST00000541086 APLP2Q06481 763 aa34.81■■■■□ 3.16
AMN-202ENST00000541086 DNMBPQ6XZF7 1577 aa34.8■■■■□ 3.16
AMN-202ENST00000541086 LAMC3Q9Y6N6 1575 aa34.73■■■■□ 3.15
AMN-202ENST00000541086 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
AMN-202ENST00000541086 CARMIL1Q5VZK9 1371 aa34.66■■■■□ 3.14
AMN-202ENST00000541086 POLA1P09884 1462 aaPredicted RBP34.64■■■■□ 3.14
AMN-202ENST00000541086 ARHGAP35Q9NRY4 1499 aa34.63■■■■□ 3.13
AMN-202ENST00000541086 RAD54L2Q9Y4B4 1467 aa34.62■■■■□ 3.13
AMN-202ENST00000541086 ABCA10Q8WWZ4 1543 aa34.6■■■■□ 3.13
AMN-202ENST00000541086 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
AMN-202ENST00000541086 URB2Q14146 1524 aaKnown RBP34.52■■■■□ 3.12
AMN-202ENST00000541086 HNRNPUL2Q1KMD3 747 aaKnown RBP34.49■■■■□ 3.11
AMN-202ENST00000541086 PDS5BQ9NTI5 1447 aa34.45■■■■□ 3.11
AMN-202ENST00000541086 KANK4Q5T7N3 995 aaPredicted RBP34.43■■■■□ 3.1
AMN-202ENST00000541086 WDR97A6NE52 1622 aa34.42■■■■□ 3.1
AMN-202ENST00000541086 KIF21AQ7Z4S6 1674 aa34.39■■■■□ 3.1
AMN-202ENST00000541086 CUL7Q14999 1698 aa34.38■■■■□ 3.09
AMN-202ENST00000541086 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.08
AMN-202ENST00000541086 CTTNBP2Q8WZ74 1663 aa34.22■■■■□ 3.07
AMN-202ENST00000541086 TDRD9Q8NDG6 1382 aaKnown RBP34.2■■■■□ 3.07
AMN-202ENST00000541086 TIAM1Q13009 1591 aa34.2■■■■□ 3.07
AMN-202ENST00000541086 RRBP1Q9P2E9 1410 aaKnown RBP34.19■■■■□ 3.06
AMN-202ENST00000541086 MAP3K1Q13233 1512 aa34.18■■■■□ 3.06
AMN-202ENST00000541086 GAPVD1Q14C86 1478 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms