RNA–Protein interactions for RNA: ENST00000595223.5

KHSRP-205, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-205ENST00000595223 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
KHSRP-205ENST00000595223 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
KHSRP-205ENST00000595223 ABCC9O60706 1549 aa38.7■■■■□ 3.79
KHSRP-205ENST00000595223 RB1CC1Q8TDY2 1594 aa36.88■■■■□ 3.49
KHSRP-205ENST00000595223 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
KHSRP-205ENST00000595223 NACADO15069 1562 aa36.66■■■■□ 3.46
KHSRP-205ENST00000595223 MYO15BQ96JP2 1530 aa36.18■■■■□ 3.38
KHSRP-205ENST00000595223 PABPN1Q86U42 306 aaKnown RBP eCLIP36.15■■■■□ 3.385e-7■□□□□ 8.6
KHSRP-205ENST00000595223 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
KHSRP-205ENST00000595223 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
KHSRP-205ENST00000595223 DCAF1Q9Y4B6 1507 aa35.82■■■■□ 3.32
KHSRP-205ENST00000595223 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
KHSRP-205ENST00000595223 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
KHSRP-205ENST00000595223 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
KHSRP-205ENST00000595223 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
KHSRP-205ENST00000595223 CC2D2AQ9P2K1 1620 aa34.87■■■■□ 3.17
KHSRP-205ENST00000595223 EIF4G1Q04637 1599 aaKnown RBP34.87■■■■□ 3.17
KHSRP-205ENST00000595223 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
KHSRP-205ENST00000595223 NCAPD3P42695 1498 aa33.87■■■■□ 3.01
KHSRP-205ENST00000595223 ATAD2BQ9ULI0 1458 aa33.81■■■■□ 3
KHSRP-205ENST00000595223 SMARCA4P51532 1647 aa33.76■■■■□ 3
KHSRP-205ENST00000595223 SMARCA2P51531 1590 aa33.73■■■□□ 2.99
KHSRP-205ENST00000595223 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
KHSRP-205ENST00000595223 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
KHSRP-205ENST00000595223 BAZ1BQ9UIG0 1483 aaKnown RBP33.54■■■□□ 2.96
KHSRP-205ENST00000595223 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
KHSRP-205ENST00000595223 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
KHSRP-205ENST00000595223 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
KHSRP-205ENST00000595223 NESP48681 1621 aa33.25■■■□□ 2.91
KHSRP-205ENST00000595223 CUX2O14529 1486 aa33.22■■■□□ 2.91
KHSRP-205ENST00000595223 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
KHSRP-205ENST00000595223 WIZO95785 1651 aa33.01■■■□□ 2.88
KHSRP-205ENST00000595223 DNAJC5Q9H3Z4 198 aa32.99■■■□□ 2.87
KHSRP-205ENST00000595223 PDS5BQ9NTI5 1447 aa32.96■■■□□ 2.87
KHSRP-205ENST00000595223 CADPSQ9ULU8 1353 aa32.91■■■□□ 2.86
KHSRP-205ENST00000595223 RSF1Q96T23 1441 aaPredicted RBP32.88■■■□□ 2.85
KHSRP-205ENST00000595223 THOC2Q8NI27 1593 aaKnown RBP32.77■■■□□ 2.84
KHSRP-205ENST00000595223 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
KHSRP-205ENST00000595223 TOP2AP11388 1531 aaKnown RBP32.66■■■□□ 2.82
KHSRP-205ENST00000595223 MRC2Q9UBG0 1479 aa32.61■■■□□ 2.81
KHSRP-205ENST00000595223 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
KHSRP-205ENST00000595223 CFTRP13569 1480 aa32.53■■■□□ 2.8
KHSRP-205ENST00000595223 FANCD2Q9BXW9 1451 aa32.52■■■□□ 2.8
KHSRP-205ENST00000595223 WDR62O43379 1518 aa32.44■■■□□ 2.78
KHSRP-205ENST00000595223 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
KHSRP-205ENST00000595223 URB2Q14146 1524 aaKnown RBP32.18■■■□□ 2.74
KHSRP-205ENST00000595223 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
KHSRP-205ENST00000595223 ABCC8Q09428 1581 aa31.9■■■□□ 2.7
KHSRP-205ENST00000595223 IFT140Q96RY7 1462 aa31.89■■■□□ 2.7
KHSRP-205ENST00000595223 TOPBP1Q92547 1522 aa31.89■■■□□ 2.7
KHSRP-205ENST00000595223 OSCARQ8IYS5 282 aa31.88■■■□□ 2.69
KHSRP-205ENST00000595223 SUPT5HO00267 1087 aaKnown RBP31.82■■■□□ 2.68
KHSRP-205ENST00000595223 TRIM41Q8WV44 630 aa31.79■■■□□ 2.68
KHSRP-205ENST00000595223 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
KHSRP-205ENST00000595223 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
KHSRP-205ENST00000595223 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
KHSRP-205ENST00000595223 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.642e-6■■■□□ 18.3
KHSRP-205ENST00000595223 EIF4G3O43432 1585 aaKnown RBP31.55■■■□□ 2.64
KHSRP-205ENST00000595223 SOGA1O94964 1423 aa31.53■■■□□ 2.64
KHSRP-205ENST00000595223 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
KHSRP-205ENST00000595223 RAD54L2Q9Y4B4 1467 aa31.5■■■□□ 2.63
KHSRP-205ENST00000595223 FBLN2P98095 1184 aa31.49■■■□□ 2.63
KHSRP-205ENST00000595223 TDRD9Q8NDG6 1382 aaKnown RBP31.44■■■□□ 2.62
KHSRP-205ENST00000595223 FGD5Q6ZNL6 1462 aa31.44■■■□□ 2.62
KHSRP-205ENST00000595223 CUX1P39880 1505 aa31.4■■■□□ 2.62
KHSRP-205ENST00000595223 CHMP7Q8WUX9 453 aaPredicted RBP31.25■■■□□ 2.59
KHSRP-205ENST00000595223 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
KHSRP-205ENST00000595223 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
KHSRP-205ENST00000595223 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
KHSRP-205ENST00000595223 SNAPC4Q5SXM2 1469 aa31.23■■■□□ 2.59
KHSRP-205ENST00000595223 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
KHSRP-205ENST00000595223 ARHGEF11O15085 1522 aa31.22■■■□□ 2.59
KHSRP-205ENST00000595223 CHD1O14646 1710 aa31.21■■■□□ 2.59
KHSRP-205ENST00000595223 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
KHSRP-205ENST00000595223 CYB5RLQ6IPT4 315 aa31.15■■■□□ 2.58
KHSRP-205ENST00000595223 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.58
KHSRP-205ENST00000595223 GAPVD1Q14C86 1478 aa31.12■■■□□ 2.57
KHSRP-205ENST00000595223 WRNQ14191 1432 aaPredicted RBP eCLIP31.09■■■□□ 2.57
KHSRP-205ENST00000595223 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
KHSRP-205ENST00000595223 SYNJ2O15056 1496 aa31.05■■■□□ 2.56
KHSRP-205ENST00000595223 SYNJ1O43426 1573 aa31■■■□□ 2.55
KHSRP-205ENST00000595223 TOP2BQ02880 1626 aa30.95■■■□□ 2.54
KHSRP-205ENST00000595223 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
KHSRP-205ENST00000595223 ABCA5Q8WWZ7 1642 aa30.92■■■□□ 2.54
KHSRP-205ENST00000595223 ARAP1Q96P48 1450 aa30.92■■■□□ 2.54
KHSRP-205ENST00000595223 BIVM-ERCC5R4GMW8 1640 aa30.9■■■□□ 2.54
KHSRP-205ENST00000595223 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
KHSRP-205ENST00000595223 TRHP20396 242 aaPredicted RBP30.8■■■□□ 2.52
KHSRP-205ENST00000595223 GRIN2AQ12879 1464 aa30.76■■■□□ 2.52
KHSRP-205ENST00000595223 FHAD1B1AJZ9 1412 aa30.75■■■□□ 2.51
KHSRP-205ENST00000595223 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
KHSRP-205ENST00000595223 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
KHSRP-205ENST00000595223 NUP160Q12769 1436 aa30.63■■■□□ 2.49
KHSRP-205ENST00000595223 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
KHSRP-205ENST00000595223 KIF27Q86VH2 1401 aa30.5■■■□□ 2.47
KHSRP-205ENST00000595223 JPH4Q96JJ6 628 aa30.45■■■□□ 2.47
KHSRP-205ENST00000595223 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
KHSRP-205ENST00000595223 IGF1RP08069 1367 aa30.41■■■□□ 2.46
KHSRP-205ENST00000595223 PRG4Q92954 1404 aaPredicted RBP30.4■■■□□ 2.46
KHSRP-205ENST00000595223 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms