RNA–Protein interactions for RNA: ENST00000275603.8

CCT6A-201, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT6A, Length 2,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-201ENST00000275603 NISCHQ9Y2I1 1504 aa34.08■■■■□ 3.05
CCT6A-201ENST00000275603 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
CCT6A-201ENST00000275603 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
CCT6A-201ENST00000275603 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
CCT6A-201ENST00000275603 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
CCT6A-201ENST00000275603 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
CCT6A-201ENST00000275603 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
CCT6A-201ENST00000275603 ABCC9O60706 1549 aa28.1■■■□□ 2.09
CCT6A-201ENST00000275603 HRCP23327 699 aa28.03■■■□□ 2.08
CCT6A-201ENST00000275603 PPARGC1BQ86YN6 1023 aaKnown RBP27.9■■■□□ 2.06
CCT6A-201ENST00000275603 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
CCT6A-201ENST00000275603 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.04
CCT6A-201ENST00000275603 NACADO15069 1562 aa27.62■■■□□ 2.01
CCT6A-201ENST00000275603 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
CCT6A-201ENST00000275603 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
CCT6A-201ENST00000275603 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
CCT6A-201ENST00000275603 LOC105371045A0A1W2PR82 267 aa27.04■■□□□ 1.92
CCT6A-201ENST00000275603 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.88
CCT6A-201ENST00000275603 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
CCT6A-201ENST00000275603 TRIM26Q12899 539 aaPredicted RBP26.58■■□□□ 1.84
CCT6A-201ENST00000275603 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
CCT6A-201ENST00000275603 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
CCT6A-201ENST00000275603 CECR2Q9BXF3 1484 aa26.52■■□□□ 1.84
CCT6A-201ENST00000275603 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
CCT6A-201ENST00000275603 PELP1Q8IZL8 1130 aaKnown RBP26.46■■□□□ 1.83
CCT6A-201ENST00000275603 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
CCT6A-201ENST00000275603 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
CCT6A-201ENST00000275603 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
CCT6A-201ENST00000275603 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
CCT6A-201ENST00000275603 WIZO95785 1651 aa26.13■■□□□ 1.77
CCT6A-201ENST00000275603 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
CCT6A-201ENST00000275603 ZEB1P37275 1124 aaPredicted RBP26.08■■□□□ 1.77
CCT6A-201ENST00000275603 NEUROD1Q13562 356 aa25.98■■□□□ 1.75
CCT6A-201ENST00000275603 ACIN1Q9UKV3 1341 aaKnown RBP25.85■■□□□ 1.73
CCT6A-201ENST00000275603 PEG3Q9GZU2 1588 aa25.83■■□□□ 1.73
CCT6A-201ENST00000275603 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
CCT6A-201ENST00000275603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
CCT6A-201ENST00000275603 GTF3C3Q9Y5Q9 886 aa25.79■■□□□ 1.72
CCT6A-201ENST00000275603 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
CCT6A-201ENST00000275603 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
CCT6A-201ENST00000275603 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
CCT6A-201ENST00000275603 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
CCT6A-201ENST00000275603 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
CCT6A-201ENST00000275603 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
CCT6A-201ENST00000275603 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
CCT6A-201ENST00000275603 TTBK1Q5TCY1 1321 aaPredicted RBP25.55■■□□□ 1.68
CCT6A-201ENST00000275603 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
CCT6A-201ENST00000275603 DIEXFQ68CQ4 756 aaKnown RBP25.52■■□□□ 1.68
CCT6A-201ENST00000275603 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
CCT6A-201ENST00000275603 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.66
CCT6A-201ENST00000275603 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.65
CCT6A-201ENST00000275603 CENPBP07199 599 aaPredicted RBP25.37■■□□□ 1.65
CCT6A-201ENST00000275603 MYT1Q01538 1121 aa25.21■■□□□ 1.63
CCT6A-201ENST00000275603 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
CCT6A-201ENST00000275603 MIER1Q8N108 512 aa24.99■■□□□ 1.59
CCT6A-201ENST00000275603 CFTRP13569 1480 aa24.97■■□□□ 1.59
CCT6A-201ENST00000275603 ZNF316A6NFI3 1004 aaPredicted RBP24.96■■□□□ 1.59
CCT6A-201ENST00000275603 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
CCT6A-201ENST00000275603 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
CCT6A-201ENST00000275603 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
CCT6A-201ENST00000275603 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
CCT6A-201ENST00000275603 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
CCT6A-201ENST00000275603 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.55
CCT6A-201ENST00000275603 NESP48681 1621 aa24.68■■□□□ 1.54
CCT6A-201ENST00000275603 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
CCT6A-201ENST00000275603 SOGA1O94964 1423 aa24.65■■□□□ 1.54
CCT6A-201ENST00000275603 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
CCT6A-201ENST00000275603 LAMC3Q9Y6N6 1575 aa24.62■■□□□ 1.53
CCT6A-201ENST00000275603 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
CCT6A-201ENST00000275603 CUX1P39880 1505 aa24.62■■□□□ 1.53
CCT6A-201ENST00000275603 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
CCT6A-201ENST00000275603 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
CCT6A-201ENST00000275603 EEA1Q15075 1411 aa24.54■■□□□ 1.52
CCT6A-201ENST00000275603 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
CCT6A-201ENST00000275603 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
CCT6A-201ENST00000275603 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
CCT6A-201ENST00000275603 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
CCT6A-201ENST00000275603 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
CCT6A-201ENST00000275603 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
CCT6A-201ENST00000275603 TSHZ2Q9NRE2 1034 aa24.38■■□□□ 1.49
CCT6A-201ENST00000275603 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
CCT6A-201ENST00000275603 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
CCT6A-201ENST00000275603 RANGAP1P46060 587 aaPredicted RBP24.34■■□□□ 1.49
CCT6A-201ENST00000275603 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
CCT6A-201ENST00000275603 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
CCT6A-201ENST00000275603 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
CCT6A-201ENST00000275603 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
CCT6A-201ENST00000275603 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
CCT6A-201ENST00000275603 BCANQ96GW7 911 aa24.26■■□□□ 1.47
CCT6A-201ENST00000275603 BCL11AQ9H165 835 aa24.25■■□□□ 1.47
CCT6A-201ENST00000275603 ANP32EQ9BTT0 268 aa24.25■■□□□ 1.47
CCT6A-201ENST00000275603 KCNH8Q96L42 1107 aa24.24■■□□□ 1.47
CCT6A-201ENST00000275603 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
CCT6A-201ENST00000275603 CUX2O14529 1486 aa24.22■■□□□ 1.47
CCT6A-201ENST00000275603 KIF21BO75037 1637 aa24.21■■□□□ 1.47
CCT6A-201ENST00000275603 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
CCT6A-201ENST00000275603 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CCT6A-201ENST00000275603 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
CCT6A-201ENST00000275603 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
CCT6A-201ENST00000275603 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms