RNA–Protein interactions for RNA: ENST00000559973.5

ETFA-210, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-210ENST00000559973 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
ETFA-210ENST00000559973 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
ETFA-210ENST00000559973 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
ETFA-210ENST00000559973 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
ETFA-210ENST00000559973 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
ETFA-210ENST00000559973 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
ETFA-210ENST00000559973 FOXD1Q16676 465 aa16.25■□□□□ 0.19
ETFA-210ENST00000559973 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
ETFA-210ENST00000559973 ADRA2BP18089 450 aa15.46■□□□□ 0.07
ETFA-210ENST00000559973 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
ETFA-210ENST00000559973 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
ETFA-210ENST00000559973 MSH5O43196 834 aa15.23■□□□□ 0.03
ETFA-210ENST00000559973 ABCC9O60706 1549 aa14.97□□□□□ -0.01
ETFA-210ENST00000559973 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
ETFA-210ENST00000559973 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
ETFA-210ENST00000559973 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
ETFA-210ENST00000559973 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
ETFA-210ENST00000559973 NACADO15069 1562 aa14.6□□□□□ -0.07
ETFA-210ENST00000559973 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
ETFA-210ENST00000559973 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
ETFA-210ENST00000559973 SCRIBQ14160 1630 aa14.27□□□□□ -0.12
ETFA-210ENST00000559973 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
ETFA-210ENST00000559973 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
ETFA-210ENST00000559973 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.14
ETFA-210ENST00000559973 KCNA4P22459 653 aa14.17□□□□□ -0.14
ETFA-210ENST00000559973 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
ETFA-210ENST00000559973 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
ETFA-210ENST00000559973 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
ETFA-210ENST00000559973 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
ETFA-210ENST00000559973 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
ETFA-210ENST00000559973 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
ETFA-210ENST00000559973 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
ETFA-210ENST00000559973 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
ETFA-210ENST00000559973 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
ETFA-210ENST00000559973 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
ETFA-210ENST00000559973 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
ETFA-210ENST00000559973 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
ETFA-210ENST00000559973 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
ETFA-210ENST00000559973 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
ETFA-210ENST00000559973 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
ETFA-210ENST00000559973 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
ETFA-210ENST00000559973 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
ETFA-210ENST00000559973 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
ETFA-210ENST00000559973 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
ETFA-210ENST00000559973 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
ETFA-210ENST00000559973 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
ETFA-210ENST00000559973 WIZO95785 1651 aa13.53□□□□□ -0.24
ETFA-210ENST00000559973 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.25
ETFA-210ENST00000559973 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
ETFA-210ENST00000559973 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
ETFA-210ENST00000559973 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
ETFA-210ENST00000559973 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
ETFA-210ENST00000559973 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
ETFA-210ENST00000559973 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
ETFA-210ENST00000559973 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
ETFA-210ENST00000559973 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
ETFA-210ENST00000559973 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
ETFA-210ENST00000559973 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
ETFA-210ENST00000559973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.327e-6■□□□□ 10.8
ETFA-210ENST00000559973 CFTRP13569 1480 aa13.07□□□□□ -0.32
ETFA-210ENST00000559973 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
ETFA-210ENST00000559973 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
ETFA-210ENST00000559973 ZBTB22O15209 634 aa13.03□□□□□ -0.32
ETFA-210ENST00000559973 NESP48681 1621 aa13.02□□□□□ -0.32
ETFA-210ENST00000559973 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
ETFA-210ENST00000559973 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
ETFA-210ENST00000559973 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
ETFA-210ENST00000559973 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
ETFA-210ENST00000559973 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
ETFA-210ENST00000559973 ERCC6Q03468 1493 aa12.9□□□□□ -0.34
ETFA-210ENST00000559973 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
ETFA-210ENST00000559973 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
ETFA-210ENST00000559973 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
ETFA-210ENST00000559973 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
ETFA-210ENST00000559973 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
ETFA-210ENST00000559973 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
ETFA-210ENST00000559973 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
ETFA-210ENST00000559973 DNMBPQ6XZF7 1577 aa12.79□□□□□ -0.36
ETFA-210ENST00000559973 CUX1P39880 1505 aa12.78□□□□□ -0.36
ETFA-210ENST00000559973 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
ETFA-210ENST00000559973 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
ETFA-210ENST00000559973 SYNJ1O43426 1573 aa12.77□□□□□ -0.36
ETFA-210ENST00000559973 TOP2BQ02880 1626 aa12.77□□□□□ -0.36
ETFA-210ENST00000559973 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
ETFA-210ENST00000559973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
ETFA-210ENST00000559973 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
ETFA-210ENST00000559973 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
ETFA-210ENST00000559973 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
ETFA-210ENST00000559973 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
ETFA-210ENST00000559973 WDR62O43379 1518 aa12.73□□□□□ -0.37
ETFA-210ENST00000559973 APLP2Q06481 763 aa12.71□□□□□ -0.37
ETFA-210ENST00000559973 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
ETFA-210ENST00000559973 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
ETFA-210ENST00000559973 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
ETFA-210ENST00000559973 SOGA1O94964 1423 aa12.67□□□□□ -0.38
ETFA-210ENST00000559973 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
ETFA-210ENST00000559973 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
ETFA-210ENST00000559973 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
ETFA-210ENST00000559973 CUX2O14529 1486 aa12.61□□□□□ -0.39
ETFA-210ENST00000559973 ABCA10Q8WWZ4 1543 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms