RNA–Protein interactions for RNA: ENST00000538682.5

SLC3A2-212, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,368 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-212ENST00000538682 NISCHQ9Y2I1 1504 aa37.32■■■■□ 3.57
SLC3A2-212ENST00000538682 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.95
SLC3A2-212ENST00000538682 ABCC9O60706 1549 aa33■■■□□ 2.87
SLC3A2-212ENST00000538682 RB1CC1Q8TDY2 1594 aa31.62■■■□□ 2.65
SLC3A2-212ENST00000538682 NACADO15069 1562 aa31.47■■■□□ 2.63
SLC3A2-212ENST00000538682 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
SLC3A2-212ENST00000538682 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
SLC3A2-212ENST00000538682 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
SLC3A2-212ENST00000538682 ZCCHC6Q5VYS8 1495 aaKnown RBP31.02■■■□□ 2.56
SLC3A2-212ENST00000538682 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.53
SLC3A2-212ENST00000538682 BICRAQ9NZM4 1560 aa30.72■■■□□ 2.51
SLC3A2-212ENST00000538682 PABPN1Q86U42 306 aaKnown RBP eCLIP30.69■■■□□ 2.5
SLC3A2-212ENST00000538682 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
SLC3A2-212ENST00000538682 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
SLC3A2-212ENST00000538682 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
SLC3A2-212ENST00000538682 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
SLC3A2-212ENST00000538682 CC2D2AQ9P2K1 1620 aa29.9■■■□□ 2.38
SLC3A2-212ENST00000538682 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.34
SLC3A2-212ENST00000538682 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
SLC3A2-212ENST00000538682 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
SLC3A2-212ENST00000538682 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
SLC3A2-212ENST00000538682 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
SLC3A2-212ENST00000538682 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
SLC3A2-212ENST00000538682 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
SLC3A2-212ENST00000538682 PEG3Q9GZU2 1588 aa28.82■■■□□ 2.2
SLC3A2-212ENST00000538682 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
SLC3A2-212ENST00000538682 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
SLC3A2-212ENST00000538682 WIZO95785 1651 aa28.47■■■□□ 2.15
SLC3A2-212ENST00000538682 NESP48681 1621 aa28.46■■■□□ 2.15
SLC3A2-212ENST00000538682 ERCC6Q03468 1493 aa28.45■■■□□ 2.15
SLC3A2-212ENST00000538682 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
SLC3A2-212ENST00000538682 CUX2O14529 1486 aa28.35■■■□□ 2.13
SLC3A2-212ENST00000538682 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
SLC3A2-212ENST00000538682 KIF21AQ7Z4S6 1674 aa28.21■■■□□ 2.11
SLC3A2-212ENST00000538682 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
SLC3A2-212ENST00000538682 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
SLC3A2-212ENST00000538682 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
SLC3A2-212ENST00000538682 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
SLC3A2-212ENST00000538682 CFTRP13569 1480 aa27.9■■■□□ 2.06
SLC3A2-212ENST00000538682 DNAJC5Q9H3Z4 198 aa27.89■■■□□ 2.06
SLC3A2-212ENST00000538682 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.05
SLC3A2-212ENST00000538682 WDR62O43379 1518 aa27.86■■■□□ 2.05
SLC3A2-212ENST00000538682 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
SLC3A2-212ENST00000538682 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
SLC3A2-212ENST00000538682 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
SLC3A2-212ENST00000538682 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
SLC3A2-212ENST00000538682 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
SLC3A2-212ENST00000538682 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
SLC3A2-212ENST00000538682 DNMBPQ6XZF7 1577 aa27.32■■□□□ 1.96
SLC3A2-212ENST00000538682 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
SLC3A2-212ENST00000538682 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
SLC3A2-212ENST00000538682 ZNF608Q9ULD9 1512 aaPredicted RBP27.19■■□□□ 1.94
SLC3A2-212ENST00000538682 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.93
SLC3A2-212ENST00000538682 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
SLC3A2-212ENST00000538682 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
SLC3A2-212ENST00000538682 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
SLC3A2-212ENST00000538682 CUX1P39880 1505 aa27.01■■□□□ 1.91
SLC3A2-212ENST00000538682 OSCARQ8IYS5 282 aa27■■□□□ 1.91
SLC3A2-212ENST00000538682 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
SLC3A2-212ENST00000538682 RAD54L2Q9Y4B4 1467 aa26.96■■□□□ 1.91
SLC3A2-212ENST00000538682 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.99e-10■■■■■ 27.5
SLC3A2-212ENST00000538682 SOGA1O94964 1423 aa26.91■■□□□ 1.9
SLC3A2-212ENST00000538682 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
SLC3A2-212ENST00000538682 CHD1O14646 1710 aa26.9■■□□□ 1.9
SLC3A2-212ENST00000538682 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
SLC3A2-212ENST00000538682 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
SLC3A2-212ENST00000538682 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
SLC3A2-212ENST00000538682 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
SLC3A2-212ENST00000538682 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
SLC3A2-212ENST00000538682 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
SLC3A2-212ENST00000538682 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
SLC3A2-212ENST00000538682 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
SLC3A2-212ENST00000538682 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
SLC3A2-212ENST00000538682 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
SLC3A2-212ENST00000538682 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
SLC3A2-212ENST00000538682 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
SLC3A2-212ENST00000538682 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
SLC3A2-212ENST00000538682 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
SLC3A2-212ENST00000538682 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
SLC3A2-212ENST00000538682 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
SLC3A2-212ENST00000538682 GAPVD1Q14C86 1478 aa26.63■■□□□ 1.85
SLC3A2-212ENST00000538682 FBLN2P98095 1184 aa26.62■■□□□ 1.85
SLC3A2-212ENST00000538682 SYNJ2O15056 1496 aa26.57■■□□□ 1.84
SLC3A2-212ENST00000538682 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
SLC3A2-212ENST00000538682 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
SLC3A2-212ENST00000538682 ADAMTS12P58397 1594 aa26.45■■□□□ 1.82
SLC3A2-212ENST00000538682 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
SLC3A2-212ENST00000538682 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
SLC3A2-212ENST00000538682 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
SLC3A2-212ENST00000538682 CYB5RLQ6IPT4 315 aa26.33■■□□□ 1.81
SLC3A2-212ENST00000538682 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
SLC3A2-212ENST00000538682 CEP170Q5SW79 1584 aa26.28■■□□□ 1.8
SLC3A2-212ENST00000538682 NUP160Q12769 1436 aa26.27■■□□□ 1.8
SLC3A2-212ENST00000538682 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
SLC3A2-212ENST00000538682 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.77
SLC3A2-212ENST00000538682 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
SLC3A2-212ENST00000538682 CUL7Q14999 1698 aa26.09■■□□□ 1.77
SLC3A2-212ENST00000538682 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
SLC3A2-212ENST00000538682 IGF1RP08069 1367 aa26.03■■□□□ 1.76
SLC3A2-212ENST00000538682 PRG4Q92954 1404 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms