RNA–Protein interactions for RNA: ENST00000531413.5

CFL1-212, Transcript of cofilin 1, humanhuman

TSL 3 BASIC

Gene CFL1, Length 636 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-212ENST00000531413 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
CFL1-212ENST00000531413 ABCC9O60706 1549 aa38.85■■■■□ 3.81
CFL1-212ENST00000531413 DNAJC5BQ9UF47 199 aa37.67■■■■□ 3.62
CFL1-212ENST00000531413 CCDC180Q9P1Z9 1646 aa37.57■■■■□ 3.6
CFL1-212ENST00000531413 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
CFL1-212ENST00000531413 PABPN1Q86U42 306 aaKnown RBP eCLIP35.93■■■■□ 3.34
CFL1-212ENST00000531413 NACADO15069 1562 aa35.78■■■■□ 3.32
CFL1-212ENST00000531413 UNC13AQ9UPW8 1703 aa35.71■■■■□ 3.31
CFL1-212ENST00000531413 DNAJC5Q9H3Z4 198 aa35.52■■■■□ 3.28
CFL1-212ENST00000531413 BICRAQ9NZM4 1560 aa35.44■■■■□ 3.26
CFL1-212ENST00000531413 DCAF8L2P0C7V8 631 aa35.25■■■■□ 3.23
CFL1-212ENST00000531413 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
CFL1-212ENST00000531413 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
CFL1-212ENST00000531413 MYO15BQ96JP2 1530 aa34.82■■■■□ 3.16
CFL1-212ENST00000531413 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
CFL1-212ENST00000531413 EIF4G1Q04637 1599 aaKnown RBP34.63■■■■□ 3.13
CFL1-212ENST00000531413 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
CFL1-212ENST00000531413 CUX2O14529 1486 aa34.01■■■■□ 3.03
CFL1-212ENST00000531413 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
CFL1-212ENST00000531413 ZCCHC6Q5VYS8 1495 aaKnown RBP33.82■■■■□ 3.01
CFL1-212ENST00000531413 ERCC6Q03468 1493 aa33.6■■■□□ 2.97
CFL1-212ENST00000531413 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
CFL1-212ENST00000531413 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
CFL1-212ENST00000531413 NESP48681 1621 aa33.02■■■□□ 2.88
CFL1-212ENST00000531413 THOC2Q8NI27 1593 aaKnown RBP32.98■■■□□ 2.87
CFL1-212ENST00000531413 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.84
CFL1-212ENST00000531413 HMGXB3Q12766 1538 aa32.7■■■□□ 2.83
CFL1-212ENST00000531413 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
CFL1-212ENST00000531413 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
CFL1-212ENST00000531413 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
CFL1-212ENST00000531413 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
CFL1-212ENST00000531413 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
CFL1-212ENST00000531413 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
CFL1-212ENST00000531413 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
CFL1-212ENST00000531413 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
CFL1-212ENST00000531413 OSCARQ8IYS5 282 aa32.18■■■□□ 2.74
CFL1-212ENST00000531413 WDR62O43379 1518 aa32.17■■■□□ 2.74
CFL1-212ENST00000531413 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
CFL1-212ENST00000531413 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
CFL1-212ENST00000531413 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
CFL1-212ENST00000531413 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
CFL1-212ENST00000531413 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.71
CFL1-212ENST00000531413 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
CFL1-212ENST00000531413 ARHGEF11O15085 1522 aa31.76■■■□□ 2.68
CFL1-212ENST00000531413 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
CFL1-212ENST00000531413 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
CFL1-212ENST00000531413 FANCD2Q9BXW9 1451 aa31.63■■■□□ 2.65
CFL1-212ENST00000531413 TRHP20396 242 aaPredicted RBP31.62■■■□□ 2.65
CFL1-212ENST00000531413 CYB5RLQ6IPT4 315 aa31.55■■■□□ 2.64
CFL1-212ENST00000531413 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
CFL1-212ENST00000531413 ARAP1Q96P48 1450 aa31.37■■■□□ 2.61
CFL1-212ENST00000531413 ZNF608Q9ULD9 1512 aaPredicted RBP31.33■■■□□ 2.61
CFL1-212ENST00000531413 CFTRP13569 1480 aa31.33■■■□□ 2.61
CFL1-212ENST00000531413 WIZO95785 1651 aa31.32■■■□□ 2.6
CFL1-212ENST00000531413 CHD1O14646 1710 aa31.18■■■□□ 2.58
CFL1-212ENST00000531413 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
CFL1-212ENST00000531413 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
CFL1-212ENST00000531413 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.56
CFL1-212ENST00000531413 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
CFL1-212ENST00000531413 TOPBP1Q92547 1522 aa30.89■■■□□ 2.54
CFL1-212ENST00000531413 FBLN2P98095 1184 aa30.86■■■□□ 2.53
CFL1-212ENST00000531413 AQRO60306 1485 aaKnown RBP eCLIP30.84■■■□□ 2.532e-7■■■□□ 16.1
CFL1-212ENST00000531413 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
CFL1-212ENST00000531413 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.52
CFL1-212ENST00000531413 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
CFL1-212ENST00000531413 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
CFL1-212ENST00000531413 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
CFL1-212ENST00000531413 ILDR1Q86SU0 546 aaPredicted RBP30.58■■■□□ 2.49
CFL1-212ENST00000531413 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
CFL1-212ENST00000531413 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
CFL1-212ENST00000531413 SNAPC4Q5SXM2 1469 aa30.49■■■□□ 2.47
CFL1-212ENST00000531413 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
CFL1-212ENST00000531413 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
CFL1-212ENST00000531413 TDRD9Q8NDG6 1382 aaKnown RBP30.42■■■□□ 2.46
CFL1-212ENST00000531413 RAD54L2Q9Y4B4 1467 aa30.42■■■□□ 2.46
CFL1-212ENST00000531413 CHMP7Q8WUX9 453 aaPredicted RBP30.39■■■□□ 2.46
CFL1-212ENST00000531413 MAGI1Q96QZ7 1491 aaPredicted RBP30.33■■■□□ 2.45
CFL1-212ENST00000531413 SOGA1O94964 1423 aa30.29■■■□□ 2.44
CFL1-212ENST00000531413 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
CFL1-212ENST00000531413 KIF13AQ9H1H9 1805 aa30.29■■■□□ 2.44
CFL1-212ENST00000531413 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
CFL1-212ENST00000531413 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.42
CFL1-212ENST00000531413 GRIN2BQ13224 1484 aa30.19■■■□□ 2.42
CFL1-212ENST00000531413 KDM4FA0A1W2PPD8 638 aa30.11■■■□□ 2.41
CFL1-212ENST00000531413 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
CFL1-212ENST00000531413 PBRM1Q86U86 1689 aa30.08■■■□□ 2.41
CFL1-212ENST00000531413 CEP170Q5SW79 1584 aa29.96■■■□□ 2.39
CFL1-212ENST00000531413 CUX1P39880 1505 aa29.89■■■□□ 2.38
CFL1-212ENST00000531413 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
CFL1-212ENST00000531413 KDM6BO15054 1643 aa29.83■■■□□ 2.37
CFL1-212ENST00000531413 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
CFL1-212ENST00000531413 FAM69CQ0P6D2 419 aa29.81■■■□□ 2.36
CFL1-212ENST00000531413 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
CFL1-212ENST00000531413 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
CFL1-212ENST00000531413 NUP160Q12769 1436 aa29.77■■■□□ 2.36
CFL1-212ENST00000531413 DIP2BQ9P265 1576 aa29.75■■■□□ 2.35
CFL1-212ENST00000531413 TSPOAP1O95153 1857 aa29.7■■■□□ 2.35
CFL1-212ENST00000531413 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
CFL1-212ENST00000531413 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
CFL1-212ENST00000531413 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms