Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SERGEF-218ENST00000532212 622 ntTSL 319.49■□□□□ 0.713e-7■□□□□ 11
NCBP2P52298 SERGEF-223ENST00000533328 541 ntTSL 519.49■□□□□ 0.713e-7■□□□□ 11
NCBP2P52298 SERGEF-220ENST00000532389 833 ntTSL 519.15■□□□□ 0.663e-7■□□□□ 11
NCBP2P52298 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.463e-7■□□□□ 11
NCBP2P52298 SERGEF-205ENST00000525422 1525 ntTSL 1 (best)15.81■□□□□ 0.123e-7■□□□□ 11
NCBP2P52298 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.12□□□□□ -0.313e-7■□□□□ 11
NCBP2P52298 SERGEF-203ENST00000524716 548 ntTSL 49.23□□□□□ -0.933e-7■□□□□ 11
NCBP2P52298 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.62□□□□□ -1.353e-7■□□□□ 11
NCBP2P52298 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.053e-7■□□□□ 11
NCBP2P52298 ANKMY1-213ENST00000418505 568 ntTSL 420.91■□□□□ 0.943e-6■□□□□ 11
NCBP2P52298 ANKMY1-219ENST00000464991 1221 ntTSL 1 (best)18.44■□□□□ 0.543e-6■□□□□ 11
NCBP2P52298 ANKMY1-214ENST00000418708 945 ntTSL 318.43■□□□□ 0.543e-6■□□□□ 11
NCBP2P52298 ANKMY1-222ENST00000484526 2969 ntTSL 215.6■□□□□ 0.093e-6■□□□□ 11
NCBP2P52298 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.56□□□□□ -0.083e-6■□□□□ 11
NCBP2P52298 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.45□□□□□ -0.263e-6■□□□□ 11
NCBP2P52298 ANKMY1-215ENST00000441168 555 ntTSL 411.55□□□□□ -0.563e-6■□□□□ 11
NCBP2P52298 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.46■□□□□ 0.393e-8■□□□□ 11
NCBP2P52298 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.33e-8■□□□□ 11
NCBP2P52298 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC11.57□□□□□ -0.567e-7■□□□□ 11
NCBP2P52298 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.927e-7■□□□□ 11
NCBP2P52298 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.65□□□□□ -1.837e-7■□□□□ 11
NCBP2P52298 TBL2-206ENST00000433464 1423 ntTSL 225.05■■□□□ 1.62e-10■□□□□ 11
NCBP2P52298 TBL2-211ENST00000452475 1262 ntTSL 323.62■■□□□ 1.372e-10■□□□□ 11
NCBP2P52298 TBL2-221ENST00000496056 579 ntTSL 223.62■■□□□ 1.372e-10■□□□□ 11
NCBP2P52298 TBL2-207ENST00000435792 1109 ntTSL 323.57■■□□□ 1.362e-10■□□□□ 11
NCBP2P52298 TBL2-212ENST00000458466 673 ntTSL 323.07■■□□□ 1.282e-10■□□□□ 11
NCBP2P52298 TBL2-203ENST00000424598 2276 ntTSL 222.53■■□□□ 1.22e-10■□□□□ 11
NCBP2P52298 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.19■■□□□ 1.142e-10■□□□□ 11
NCBP2P52298 TBL2-204ENST00000426966 1196 ntTSL 322.06■■□□□ 1.122e-10■□□□□ 11
NCBP2P52298 TBL2-209ENST00000450285 2209 ntTSL 1 (best)20.81■□□□□ 0.922e-10■□□□□ 11
NCBP2P52298 TBL2-202ENST00000417008 1717 ntTSL 516.97■□□□□ 0.312e-10■□□□□ 11
NCBP2P52298 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.132e-10■□□□□ 11
NCBP2P52298 TBL2-218ENST00000479892 494 ntTSL 46.16□□□□□ -1.422e-10■□□□□ 11
NCBP2P52298 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.8□□□□□ -0.043e-7■□□□□ 11
NCBP2P52298 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.073e-7■□□□□ 11
NCBP2P52298 CLK4-211ENST00000522556 1249 ntTSL 1 (best)16.44■□□□□ 0.221e-8■□□□□ 11
NCBP2P52298 CLK4-204ENST00000520126 1316 ntTSL 215.97■□□□□ 0.151e-8■□□□□ 11
NCBP2P52298 CLK4-205ENST00000520199 857 ntTSL 214.13□□□□□ -0.151e-8■□□□□ 11
NCBP2P52298 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.171e-8■□□□□ 11
NCBP2P52298 CLK4-210ENST00000522136 1955 ntTSL 1 (best)12.56□□□□□ -0.41e-8■□□□□ 11
NCBP2P52298 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC11.5□□□□□ -0.571e-8■□□□□ 11
NCBP2P52298 CLK4-215ENST00000611733 2182 ntTSL 5 BASIC11.28□□□□□ -0.61e-8■□□□□ 11
NCBP2P52298 CLK4-206ENST00000520878 3722 ntTSL 1 (best)10.86□□□□□ -0.671e-8■□□□□ 11
NCBP2P52298 CLK4-209ENST00000521621 2780 ntTSL 1 (best)8.71□□□□□ -1.011e-8■□□□□ 11
NCBP2P52298 CLK4-203ENST00000519583 3462 ntTSL 1 (best)7.49□□□□□ -1.211e-8■□□□□ 11
NCBP2P52298 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.21□□□□□ -1.421e-8■□□□□ 11
NCBP2P52298 CLK4-207ENST00000520909 1305 ntTSL 1 (best)3.47□□□□□ -1.851e-8■□□□□ 11
NCBP2P52298 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.975e-6■□□□□ 11
NCBP2P52298 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.68■□□□□ 0.265e-6■□□□□ 11
NCBP2P52298 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.421e-7■□□□□ 11
NCBP2P52298 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.361e-7■□□□□ 11
NCBP2P52298 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.361e-7■□□□□ 11
NCBP2P52298 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.21e-7■□□□□ 11
NCBP2P52298 RALBP1-205ENST00000585015 945 ntTSL 322.36■■□□□ 1.171e-7■□□□□ 11
NCBP2P52298 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.48■■□□□ 1.033e-12■□□□□ 11
NCBP2P52298 SLC20A2-212ENST00000523340 1265 ntTSL 221.3■■□□□ 11e-7■□□□□ 11
NCBP2P52298 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.981e-7■□□□□ 11
NCBP2P52298 USP21-209ENST00000492950 1150 ntTSL 520.71■□□□□ 0.911e-7■□□□□ 11
NCBP2P52298 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.871e-7■□□□□ 11
NCBP2P52298 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.51■□□□□ 0.873e-12■□□□□ 11
NCBP2P52298 C11orf80-209ENST00000527368 812 ntTSL 520.39■□□□□ 0.851e-7■□□□□ 11
NCBP2P52298 USP21-204ENST00000479344 709 ntTSL 219.16■□□□□ 0.661e-7■□□□□ 11
NCBP2P52298 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.591e-7■□□□□ 11
NCBP2P52298 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.511e-7■□□□□ 11
NCBP2P52298 C11orf80-202ENST00000524551 548 ntAPPRIS ALT2 TSL 518.08■□□□□ 0.481e-7■□□□□ 11
NCBP2P52298 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.471e-7■□□□□ 11
NCBP2P52298 TST-203ENST00000438203 451 ntTSL 317.26■□□□□ 0.351e-7■□□□□ 11
NCBP2P52298 C11orf80-217ENST00000534325 583 ntAPPRIS ALT2 TSL 317.05■□□□□ 0.321e-7■□□□□ 11
NCBP2P52298 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.99■□□□□ 0.313e-12■□□□□ 11
NCBP2P52298 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.311e-7■□□□□ 11
NCBP2P52298 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.281e-7■□□□□ 11
NCBP2P52298 TTYH3-202ENST00000400376 560 ntTSL 416.38■□□□□ 0.211e-7■□□□□ 11
NCBP2P52298 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.151e-7■□□□□ 11
NCBP2P52298 SLC20A2-214ENST00000524237 545 ntTSL 414.71□□□□□ -0.051e-7■□□□□ 11
NCBP2P52298 TRIT1-209ENST00000486825 850 ntTSL 514.31□□□□□ -0.121e-7■□□□□ 11
NCBP2P52298 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.07□□□□□ -0.163e-12■□□□□ 11
NCBP2P52298 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.91□□□□□ -0.181e-7■□□□□ 11
NCBP2P52298 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.67□□□□□ -0.221e-7■□□□□ 11
NCBP2P52298 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.291e-7■□□□□ 11
NCBP2P52298 HMGCS1-203ENST00000507004 950 ntTSL 213.12□□□□□ -0.311e-7■□□□□ 11
NCBP2P52298 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.85□□□□□ -0.351e-7■□□□□ 11
NCBP2P52298 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.451e-7■□□□□ 11
NCBP2P52298 TRIT1-205ENST00000462797 2000 ntTSL 512.21□□□□□ -0.461e-7■□□□□ 11
NCBP2P52298 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.461e-7■□□□□ 11
NCBP2P52298 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.491e-7■□□□□ 11
NCBP2P52298 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.621e-7■□□□□ 11
NCBP2P52298 TRIT1-212ENST00000492612 983 ntTSL 511.04□□□□□ -0.641e-7■□□□□ 11
NCBP2P52298 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC10.81□□□□□ -0.681e-7■□□□□ 11
NCBP2P52298 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.691e-7■□□□□ 11
NCBP2P52298 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.731e-7■□□□□ 11
NCBP2P52298 HMGCS1-204ENST00000507293 708 ntTSL 1 (best)10.44□□□□□ -0.741e-7■□□□□ 11
NCBP2P52298 TRIT1-213ENST00000495175 1156 ntTSL 1 (best)10.34□□□□□ -0.751e-7■□□□□ 11
NCBP2P52298 C11orf80-211ENST00000531400 367 ntTSL 39.91□□□□□ -0.821e-7■□□□□ 11
NCBP2P52298 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.831e-7■□□□□ 11
NCBP2P52298 TRIT1-211ENST00000491865 738 ntTSL 59.49□□□□□ -0.891e-7■□□□□ 11
NCBP2P52298 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.4□□□□□ -1.071e-7■□□□□ 11
NCBP2P52298 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.11e-7■□□□□ 11
NCBP2P52298 TRIT1-210ENST00000489945 861 ntTSL 57.73□□□□□ -1.171e-7■□□□□ 11
NCBP2P52298 SLC20A2-203ENST00000518384 557 ntTSL 47.04□□□□□ -1.281e-7■□□□□ 11
NCBP2P52298 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.01□□□□□ -1.451e-7■□□□□ 11
Retrieved 100 of 18,329 protein–RNA pairs in 144 ms