RNA–Protein interactions for RNA: ENST00000368002.7

USP21-203, Transcript of ubiquitin specific peptidase 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP21, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-203ENST00000368002 NISCHQ9Y2I1 1504 aa41.22■■■■■ 4.19
USP21-203ENST00000368002 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
USP21-203ENST00000368002 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
USP21-203ENST00000368002 ZCCHC6Q5VYS8 1495 aaKnown RBP34.79■■■■□ 3.16
USP21-203ENST00000368002 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
USP21-203ENST00000368002 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
USP21-203ENST00000368002 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
USP21-203ENST00000368002 CHIC1Q5VXU3 224 aa33.52■■■□□ 2.96
USP21-203ENST00000368002 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.94
USP21-203ENST00000368002 SCRIBQ14160 1630 aa32.96■■■□□ 2.87
USP21-203ENST00000368002 HRCP23327 699 aa32.93■■■□□ 2.86
USP21-203ENST00000368002 ABCC9O60706 1549 aa32.91■■■□□ 2.86
USP21-203ENST00000368002 PCGF6Q9BYE7 350 aa32.66■■■□□ 2.82
USP21-203ENST00000368002 NACADO15069 1562 aa32.58■■■□□ 2.81
USP21-203ENST00000368002 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
USP21-203ENST00000368002 LOC105371045A0A1W2PR82 267 aa32.46■■■□□ 2.79
USP21-203ENST00000368002 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
USP21-203ENST00000368002 RB1CC1Q8TDY2 1594 aa32.13■■■□□ 2.73
USP21-203ENST00000368002 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
USP21-203ENST00000368002 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
USP21-203ENST00000368002 TRIM26Q12899 539 aaPredicted RBP32.06■■■□□ 2.72
USP21-203ENST00000368002 TRIM41Q8WV44 630 aa31.93■■■□□ 2.7
USP21-203ENST00000368002 WIZO95785 1651 aa31.88■■■□□ 2.69
USP21-203ENST00000368002 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
USP21-203ENST00000368002 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
USP21-203ENST00000368002 FAM9AQ8IZU1 332 aaPredicted RBP31.6■■■□□ 2.65
USP21-203ENST00000368002 ZEB1P37275 1124 aaPredicted RBP31.52■■■□□ 2.64
USP21-203ENST00000368002 PABPN1Q86U42 306 aaKnown RBP eCLIP31.46■■■□□ 2.63
USP21-203ENST00000368002 SMARCA4P51532 1647 aa31.45■■■□□ 2.63
USP21-203ENST00000368002 EHMT2Q96KQ7 1210 aa31.38■■■□□ 2.61
USP21-203ENST00000368002 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
USP21-203ENST00000368002 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
USP21-203ENST00000368002 EIF4G1Q04637 1599 aaKnown RBP31.3■■■□□ 2.6
USP21-203ENST00000368002 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
USP21-203ENST00000368002 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
USP21-203ENST00000368002 ABCC8Q09428 1581 aa31.07■■■□□ 2.56
USP21-203ENST00000368002 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
USP21-203ENST00000368002 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
USP21-203ENST00000368002 ATAD2BQ9ULI0 1458 aa30.74■■■□□ 2.51
USP21-203ENST00000368002 SOGA1O94964 1423 aa30.72■■■□□ 2.51
USP21-203ENST00000368002 CEP162Q5TB80 1403 aa30.66■■■□□ 2.5
USP21-203ENST00000368002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.65■■■□□ 2.5
USP21-203ENST00000368002 EEA1Q15075 1411 aa30.64■■■□□ 2.5
USP21-203ENST00000368002 TNIKQ9UKE5 1360 aa30.63■■■□□ 2.49
USP21-203ENST00000368002 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
USP21-203ENST00000368002 CCER1Q8TC90 406 aaPredicted RBP30.61■■■□□ 2.49
USP21-203ENST00000368002 RUSC2Q8N2Y8 1516 aa30.61■■■□□ 2.49
USP21-203ENST00000368002 CSRNP3Q8WYN3 585 aa30.52■■■□□ 2.48
USP21-203ENST00000368002 SCAF1Q9H7N4 1312 aaKnown RBP30.45■■■□□ 2.46
USP21-203ENST00000368002 SYNJ1O43426 1573 aa30.42■■■□□ 2.46
USP21-203ENST00000368002 GOLGA3Q08378 1498 aa30.4■■■□□ 2.46
USP21-203ENST00000368002 UBTFP17480 764 aaKnown RBP30.36■■■□□ 2.45
USP21-203ENST00000368002 TTBK1Q5TCY1 1321 aaPredicted RBP30.34■■■□□ 2.45
USP21-203ENST00000368002 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
USP21-203ENST00000368002 KIF21BO75037 1637 aa30.21■■■□□ 2.43
USP21-203ENST00000368002 PELP1Q8IZL8 1130 aaKnown RBP30.18■■■□□ 2.42
USP21-203ENST00000368002 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
USP21-203ENST00000368002 DIEXFQ68CQ4 756 aaKnown RBP30.17■■■□□ 2.42
USP21-203ENST00000368002 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
USP21-203ENST00000368002 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
USP21-203ENST00000368002 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
USP21-203ENST00000368002 CLIP1P30622 1438 aa30.04■■■□□ 2.4
USP21-203ENST00000368002 NEUROD1Q13562 356 aa30.01■■■□□ 2.4
USP21-203ENST00000368002 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
USP21-203ENST00000368002 RAPGEF2Q9Y4G8 1499 aa29.97■■■□□ 2.39
USP21-203ENST00000368002 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
USP21-203ENST00000368002 ZNF316A6NFI3 1004 aaPredicted RBP29.92■■■□□ 2.38
USP21-203ENST00000368002 RANGAP1P46060 587 aaPredicted RBP29.91■■■□□ 2.38
USP21-203ENST00000368002 CENPBP07199 599 aaPredicted RBP29.9■■■□□ 2.38
USP21-203ENST00000368002 CUX1P39880 1505 aa29.86■■■□□ 2.37
USP21-203ENST00000368002 CFTRP13569 1480 aa29.85■■■□□ 2.37
USP21-203ENST00000368002 HNRNPUL2Q1KMD3 747 aaKnown RBP29.82■■■□□ 2.36
USP21-203ENST00000368002 APLP2Q06481 763 aa29.76■■■□□ 2.35
USP21-203ENST00000368002 GTF3C3Q9Y5Q9 886 aa29.72■■■□□ 2.35
USP21-203ENST00000368002 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
USP21-203ENST00000368002 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
USP21-203ENST00000368002 KIF27Q86VH2 1401 aa29.62■■■□□ 2.33
USP21-203ENST00000368002 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
USP21-203ENST00000368002 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
USP21-203ENST00000368002 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
USP21-203ENST00000368002 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
USP21-203ENST00000368002 MIER1Q8N108 512 aa29.49■■■□□ 2.31
USP21-203ENST00000368002 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.31
USP21-203ENST00000368002 CUX2O14529 1486 aa29.43■■■□□ 2.3
USP21-203ENST00000368002 YTHDC1Q96MU7 727 aaKnown RBP29.38■■■□□ 2.29
USP21-203ENST00000368002 DHX57Q6P158 1386 aaKnown RBP29.38■■■□□ 2.29
USP21-203ENST00000368002 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
USP21-203ENST00000368002 IGF1RP08069 1367 aa29.37■■■□□ 2.29
USP21-203ENST00000368002 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
USP21-203ENST00000368002 RRBP1Q9P2E9 1410 aaKnown RBP29.33■■■□□ 2.29
USP21-203ENST00000368002 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
USP21-203ENST00000368002 NESP48681 1621 aa29.26■■■□□ 2.28
USP21-203ENST00000368002 ARHGAP35Q9NRY4 1499 aa29.26■■■□□ 2.27
USP21-203ENST00000368002 CARMIL1Q5VZK9 1371 aa29.23■■■□□ 2.27
USP21-203ENST00000368002 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
USP21-203ENST00000368002 CCNB3Q8WWL7 1395 aa29.15■■■□□ 2.26
USP21-203ENST00000368002 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
USP21-203ENST00000368002 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
USP21-203ENST00000368002 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
USP21-203ENST00000368002 POLA1P09884 1462 aaPredicted RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms