RNA–Protein interactions for RNA: ENST00000489945.5

TRIT1-210, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-210ENST00000489945 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
TRIT1-210ENST00000489945 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
TRIT1-210ENST00000489945 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
TRIT1-210ENST00000489945 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
TRIT1-210ENST00000489945 ABCC9O60706 1549 aa16.32■□□□□ 0.2
TRIT1-210ENST00000489945 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
TRIT1-210ENST00000489945 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
TRIT1-210ENST00000489945 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
TRIT1-210ENST00000489945 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
TRIT1-210ENST00000489945 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
TRIT1-210ENST00000489945 NACADO15069 1562 aa15.92■□□□□ 0.14
TRIT1-210ENST00000489945 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
TRIT1-210ENST00000489945 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
TRIT1-210ENST00000489945 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
TRIT1-210ENST00000489945 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
TRIT1-210ENST00000489945 BICRAQ9NZM4 1560 aa15.35■□□□□ 0.05
TRIT1-210ENST00000489945 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIT1-210ENST00000489945 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
TRIT1-210ENST00000489945 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
TRIT1-210ENST00000489945 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
TRIT1-210ENST00000489945 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
TRIT1-210ENST00000489945 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
TRIT1-210ENST00000489945 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
TRIT1-210ENST00000489945 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
TRIT1-210ENST00000489945 RSF1Q96T23 1441 aaPredicted RBP14.86□□□□□ -0.03
TRIT1-210ENST00000489945 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
TRIT1-210ENST00000489945 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
TRIT1-210ENST00000489945 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
TRIT1-210ENST00000489945 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
TRIT1-210ENST00000489945 WIZO95785 1651 aa14.75□□□□□ -0.05
TRIT1-210ENST00000489945 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
TRIT1-210ENST00000489945 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
TRIT1-210ENST00000489945 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
TRIT1-210ENST00000489945 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
TRIT1-210ENST00000489945 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
TRIT1-210ENST00000489945 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
TRIT1-210ENST00000489945 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
TRIT1-210ENST00000489945 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
TRIT1-210ENST00000489945 CFTRP13569 1480 aa14.27□□□□□ -0.12
TRIT1-210ENST00000489945 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
TRIT1-210ENST00000489945 NESP48681 1621 aa14.23□□□□□ -0.13
TRIT1-210ENST00000489945 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
TRIT1-210ENST00000489945 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
TRIT1-210ENST00000489945 ADRA2BP18089 450 aa14.12□□□□□ -0.15
TRIT1-210ENST00000489945 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
TRIT1-210ENST00000489945 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
TRIT1-210ENST00000489945 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
TRIT1-210ENST00000489945 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
TRIT1-210ENST00000489945 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
TRIT1-210ENST00000489945 WRNQ14191 1432 aaPredicted RBP eCLIP14□□□□□ -0.171e-6■■■■■ 58.5
TRIT1-210ENST00000489945 FOXD1Q16676 465 aa14□□□□□ -0.17
TRIT1-210ENST00000489945 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
TRIT1-210ENST00000489945 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
TRIT1-210ENST00000489945 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
TRIT1-210ENST00000489945 CUX1P39880 1505 aa13.95□□□□□ -0.18
TRIT1-210ENST00000489945 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
TRIT1-210ENST00000489945 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
TRIT1-210ENST00000489945 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
TRIT1-210ENST00000489945 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
TRIT1-210ENST00000489945 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
TRIT1-210ENST00000489945 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
TRIT1-210ENST00000489945 WDR62O43379 1518 aa13.9□□□□□ -0.18
TRIT1-210ENST00000489945 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
TRIT1-210ENST00000489945 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
TRIT1-210ENST00000489945 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
TRIT1-210ENST00000489945 SOGA1O94964 1423 aa13.81□□□□□ -0.2
TRIT1-210ENST00000489945 CUX2O14529 1486 aa13.79□□□□□ -0.2
TRIT1-210ENST00000489945 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
TRIT1-210ENST00000489945 KCNA4P22459 653 aa13.76□□□□□ -0.21
TRIT1-210ENST00000489945 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
TRIT1-210ENST00000489945 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
TRIT1-210ENST00000489945 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
TRIT1-210ENST00000489945 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
TRIT1-210ENST00000489945 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
TRIT1-210ENST00000489945 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
TRIT1-210ENST00000489945 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
TRIT1-210ENST00000489945 EEA1Q15075 1411 aa13.66□□□□□ -0.22
TRIT1-210ENST00000489945 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
TRIT1-210ENST00000489945 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■■■■■ 29
TRIT1-210ENST00000489945 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
TRIT1-210ENST00000489945 FAM9AQ8IZU1 332 aaPredicted RBP13.64□□□□□ -0.23
TRIT1-210ENST00000489945 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
TRIT1-210ENST00000489945 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
TRIT1-210ENST00000489945 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
TRIT1-210ENST00000489945 IGF1RP08069 1367 aa13.6□□□□□ -0.23
TRIT1-210ENST00000489945 EIF4G3O43432 1585 aaKnown RBP13.6□□□□□ -0.23
TRIT1-210ENST00000489945 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
TRIT1-210ENST00000489945 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
TRIT1-210ENST00000489945 PBRM1Q86U86 1689 aa13.55□□□□□ -0.24
TRIT1-210ENST00000489945 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
TRIT1-210ENST00000489945 CUL7Q14999 1698 aa13.51□□□□□ -0.25
TRIT1-210ENST00000489945 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
TRIT1-210ENST00000489945 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
TRIT1-210ENST00000489945 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
TRIT1-210ENST00000489945 FHAD1B1AJZ9 1412 aa13.49□□□□□ -0.25
TRIT1-210ENST00000489945 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
TRIT1-210ENST00000489945 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
TRIT1-210ENST00000489945 KIF21BO75037 1637 aa13.47□□□□□ -0.25
TRIT1-210ENST00000489945 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
TRIT1-210ENST00000489945 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms