RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
CLK4-208ENST00000520957 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.76
CLK4-208ENST00000520957 ABCC9O60706 1549 aa25.61■■□□□ 1.69
CLK4-208ENST00000520957 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
CLK4-208ENST00000520957 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
CLK4-208ENST00000520957 NACADO15069 1562 aa24.56■■□□□ 1.52
CLK4-208ENST00000520957 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
CLK4-208ENST00000520957 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.5
CLK4-208ENST00000520957 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
CLK4-208ENST00000520957 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
CLK4-208ENST00000520957 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
CLK4-208ENST00000520957 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
CLK4-208ENST00000520957 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
CLK4-208ENST00000520957 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
CLK4-208ENST00000520957 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
CLK4-208ENST00000520957 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
CLK4-208ENST00000520957 CECR2Q9BXF3 1484 aa23.19■■□□□ 1.3
CLK4-208ENST00000520957 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
CLK4-208ENST00000520957 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
CLK4-208ENST00000520957 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
CLK4-208ENST00000520957 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
CLK4-208ENST00000520957 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
CLK4-208ENST00000520957 NCAPD3P42695 1498 aa22.75■■□□□ 1.23
CLK4-208ENST00000520957 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
CLK4-208ENST00000520957 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
CLK4-208ENST00000520957 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
CLK4-208ENST00000520957 WIZO95785 1651 aa22.61■■□□□ 1.21
CLK4-208ENST00000520957 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
CLK4-208ENST00000520957 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
CLK4-208ENST00000520957 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
CLK4-208ENST00000520957 TOP2AP11388 1531 aaKnown RBP22.34■■□□□ 1.17
CLK4-208ENST00000520957 NESP48681 1621 aa22.24■■□□□ 1.15
CLK4-208ENST00000520957 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
CLK4-208ENST00000520957 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
CLK4-208ENST00000520957 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
CLK4-208ENST00000520957 CFTRP13569 1480 aa22.02■■□□□ 1.11
CLK4-208ENST00000520957 ERCC6Q03468 1493 aa21.99■■□□□ 1.11
CLK4-208ENST00000520957 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
CLK4-208ENST00000520957 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
CLK4-208ENST00000520957 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
CLK4-208ENST00000520957 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
CLK4-208ENST00000520957 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
CLK4-208ENST00000520957 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
CLK4-208ENST00000520957 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.06
CLK4-208ENST00000520957 CUX2O14529 1486 aa21.61■■□□□ 1.05
CLK4-208ENST00000520957 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
CLK4-208ENST00000520957 WDR62O43379 1518 aa21.59■■□□□ 1.05
CLK4-208ENST00000520957 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
CLK4-208ENST00000520957 CUX1P39880 1505 aa21.45■■□□□ 1.02
CLK4-208ENST00000520957 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
CLK4-208ENST00000520957 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
CLK4-208ENST00000520957 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.01
CLK4-208ENST00000520957 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
CLK4-208ENST00000520957 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
CLK4-208ENST00000520957 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
CLK4-208ENST00000520957 SOGA1O94964 1423 aa21.32■■□□□ 1
CLK4-208ENST00000520957 IFT140Q96RY7 1462 aa21.31■■□□□ 1
CLK4-208ENST00000520957 SYNJ1O43426 1573 aa21.3■■□□□ 1
CLK4-208ENST00000520957 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
CLK4-208ENST00000520957 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
CLK4-208ENST00000520957 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
CLK4-208ENST00000520957 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.998e-7■■■□□ 16.1
CLK4-208ENST00000520957 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
CLK4-208ENST00000520957 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
CLK4-208ENST00000520957 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
CLK4-208ENST00000520957 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
CLK4-208ENST00000520957 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
CLK4-208ENST00000520957 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
CLK4-208ENST00000520957 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
CLK4-208ENST00000520957 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
CLK4-208ENST00000520957 FBLN2P98095 1184 aa20.99■□□□□ 0.95
CLK4-208ENST00000520957 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
CLK4-208ENST00000520957 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
CLK4-208ENST00000520957 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
CLK4-208ENST00000520957 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
CLK4-208ENST00000520957 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
CLK4-208ENST00000520957 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
CLK4-208ENST00000520957 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
CLK4-208ENST00000520957 RUSC2Q8N2Y8 1516 aa20.91■□□□□ 0.94
CLK4-208ENST00000520957 IGF1RP08069 1367 aa20.89■□□□□ 0.94
CLK4-208ENST00000520957 MAGI1Q96QZ7 1491 aaPredicted RBP20.86■□□□□ 0.93
CLK4-208ENST00000520957 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
CLK4-208ENST00000520957 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
CLK4-208ENST00000520957 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
CLK4-208ENST00000520957 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
CLK4-208ENST00000520957 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
CLK4-208ENST00000520957 CHD1O14646 1710 aa20.75■□□□□ 0.91
CLK4-208ENST00000520957 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
CLK4-208ENST00000520957 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
CLK4-208ENST00000520957 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
CLK4-208ENST00000520957 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
CLK4-208ENST00000520957 NUP160Q12769 1436 aa20.62■□□□□ 0.89
CLK4-208ENST00000520957 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
CLK4-208ENST00000520957 CUL7Q14999 1698 aa20.59■□□□□ 0.89
CLK4-208ENST00000520957 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.88
CLK4-208ENST00000520957 PRXQ9BXM0 1461 aa20.58■□□□□ 0.88
CLK4-208ENST00000520957 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.88
CLK4-208ENST00000520957 EEA1Q15075 1411 aa20.56■□□□□ 0.88
CLK4-208ENST00000520957 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
CLK4-208ENST00000520957 JPH4Q96JJ6 628 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms