RNA–Protein interactions for RNA: ENST00000375712.3

KIF3B-201, Transcript of kinesin family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KIF3B, Length 6,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3B-201ENST00000375712 NISCHQ9Y2I1 1504 aa19.27■□□□□ 0.68
KIF3B-201ENST00000375712 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
KIF3B-201ENST00000375712 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
KIF3B-201ENST00000375712 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
KIF3B-201ENST00000375712 EHMT2Q96KQ7 1210 aa16.81■□□□□ 0.28
KIF3B-201ENST00000375712 PCGF6Q9BYE7 350 aa16.8■□□□□ 0.28
KIF3B-201ENST00000375712 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
KIF3B-201ENST00000375712 HRCP23327 699 aa16.44■□□□□ 0.22
KIF3B-201ENST00000375712 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
KIF3B-201ENST00000375712 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
KIF3B-201ENST00000375712 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
KIF3B-201ENST00000375712 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
KIF3B-201ENST00000375712 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
KIF3B-201ENST00000375712 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
KIF3B-201ENST00000375712 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
KIF3B-201ENST00000375712 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
KIF3B-201ENST00000375712 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
KIF3B-201ENST00000375712 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
KIF3B-201ENST00000375712 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
KIF3B-201ENST00000375712 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
KIF3B-201ENST00000375712 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
KIF3B-201ENST00000375712 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
KIF3B-201ENST00000375712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
KIF3B-201ENST00000375712 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
KIF3B-201ENST00000375712 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
KIF3B-201ENST00000375712 CENPBP07199 599 aaPredicted RBP15.65■□□□□ 0.1
KIF3B-201ENST00000375712 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
KIF3B-201ENST00000375712 APLP2Q06481 763 aa15.51■□□□□ 0.07
KIF3B-201ENST00000375712 ABCC9O60706 1549 aa15.48■□□□□ 0.07
KIF3B-201ENST00000375712 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
KIF3B-201ENST00000375712 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
KIF3B-201ENST00000375712 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
KIF3B-201ENST00000375712 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
KIF3B-201ENST00000375712 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
KIF3B-201ENST00000375712 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
KIF3B-201ENST00000375712 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
KIF3B-201ENST00000375712 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
KIF3B-201ENST00000375712 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
KIF3B-201ENST00000375712 ITGAEP38570 1179 aa15.17■□□□□ 0.02
KIF3B-201ENST00000375712 NACADO15069 1562 aa15.13■□□□□ 0.01
KIF3B-201ENST00000375712 MYT1Q01538 1121 aa15.1■□□□□ 0.01
KIF3B-201ENST00000375712 WIZO95785 1651 aa15.1■□□□□ 0.01
KIF3B-201ENST00000375712 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
KIF3B-201ENST00000375712 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
KIF3B-201ENST00000375712 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
KIF3B-201ENST00000375712 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
KIF3B-201ENST00000375712 BCANQ96GW7 911 aa15□□□□□ -0.01
KIF3B-201ENST00000375712 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
KIF3B-201ENST00000375712 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
KIF3B-201ENST00000375712 MIER1Q8N108 512 aa14.9□□□□□ -0.02
KIF3B-201ENST00000375712 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
KIF3B-201ENST00000375712 NEFLP07196 543 aa14.89□□□□□ -0.03
KIF3B-201ENST00000375712 CEP162Q5TB80 1403 aa14.89□□□□□ -0.03
KIF3B-201ENST00000375712 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
KIF3B-201ENST00000375712 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
KIF3B-201ENST00000375712 FAM50AQ14320 339 aaKnown RBP14.79□□□□□ -0.04
KIF3B-201ENST00000375712 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
KIF3B-201ENST00000375712 SOGA1O94964 1423 aa14.75□□□□□ -0.05
KIF3B-201ENST00000375712 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
KIF3B-201ENST00000375712 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
KIF3B-201ENST00000375712 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
KIF3B-201ENST00000375712 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
KIF3B-201ENST00000375712 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
KIF3B-201ENST00000375712 CLIP1P30622 1438 aa14.63□□□□□ -0.07
KIF3B-201ENST00000375712 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
KIF3B-201ENST00000375712 FKBP8Q14318 412 aa14.62□□□□□ -0.07
KIF3B-201ENST00000375712 TNIKQ9UKE5 1360 aa14.61□□□□□ -0.07
KIF3B-201ENST00000375712 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
KIF3B-201ENST00000375712 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
KIF3B-201ENST00000375712 RUSC2Q8N2Y8 1516 aa14.58□□□□□ -0.08
KIF3B-201ENST00000375712 HIRIP3Q9BW71 556 aaPredicted RBP14.57□□□□□ -0.08
KIF3B-201ENST00000375712 EEA1Q15075 1411 aa14.55□□□□□ -0.08
KIF3B-201ENST00000375712 ANP32CO43423 234 aa14.54□□□□□ -0.08
KIF3B-201ENST00000375712 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
KIF3B-201ENST00000375712 DDX10Q13206 875 aaKnown RBP14.52□□□□□ -0.08
KIF3B-201ENST00000375712 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
KIF3B-201ENST00000375712 SUPT16HQ9Y5B9 1047 aaKnown RBP14.51□□□□□ -0.09
KIF3B-201ENST00000375712 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
KIF3B-201ENST00000375712 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
KIF3B-201ENST00000375712 IRX6P78412 446 aaPredicted RBP14.46□□□□□ -0.09
KIF3B-201ENST00000375712 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
KIF3B-201ENST00000375712 CDK11AQ9UQ88 783 aaPredicted RBP14.4□□□□□ -0.1
KIF3B-201ENST00000375712 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
KIF3B-201ENST00000375712 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
KIF3B-201ENST00000375712 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
KIF3B-201ENST00000375712 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
KIF3B-201ENST00000375712 SIN3AQ96ST3 1273 aa14.32□□□□□ -0.12
KIF3B-201ENST00000375712 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
KIF3B-201ENST00000375712 KIF21BO75037 1637 aa14.32□□□□□ -0.12
KIF3B-201ENST00000375712 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
KIF3B-201ENST00000375712 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
KIF3B-201ENST00000375712 ZNF326Q5BKZ1 582 aaKnown RBP14.31□□□□□ -0.12
KIF3B-201ENST00000375712 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
KIF3B-201ENST00000375712 HNRNPUQ00839 825 aaKnown RBP eCLIP14.3□□□□□ -0.12
KIF3B-201ENST00000375712 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
KIF3B-201ENST00000375712 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
KIF3B-201ENST00000375712 FAM9BQ8IZU0 186 aa14.26□□□□□ -0.13
KIF3B-201ENST00000375712 SENP3-EIF4A1A0A087X0R7 540 aa14.25□□□□□ -0.13
KIF3B-201ENST00000375712 CHIC2Q9UKJ5 165 aa14.24□□□□□ -0.13
KIF3B-201ENST00000375712 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms