RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
CUL3-201ENST00000264414 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
CUL3-201ENST00000264414 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
CUL3-201ENST00000264414 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
CUL3-201ENST00000264414 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
CUL3-201ENST00000264414 ERICH6Q7L0X2 663 aa23.48■■□□□ 1.35
CUL3-201ENST00000264414 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
CUL3-201ENST00000264414 APLP2Q06481 763 aa23.22■■□□□ 1.31
CUL3-201ENST00000264414 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
CUL3-201ENST00000264414 MYT1Q01538 1121 aa23.09■■□□□ 1.29
CUL3-201ENST00000264414 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
CUL3-201ENST00000264414 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
CUL3-201ENST00000264414 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
CUL3-201ENST00000264414 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
CUL3-201ENST00000264414 YTHDC1Q96MU7 727 aaKnown RBP22.67■■□□□ 1.22
CUL3-201ENST00000264414 CENPBP07199 599 aaPredicted RBP22.49■■□□□ 1.19
CUL3-201ENST00000264414 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
CUL3-201ENST00000264414 NEFLP07196 543 aa22.42■■□□□ 1.18
CUL3-201ENST00000264414 CNGB1Q14028 1251 aaPredicted RBP22.35■■□□□ 1.17
CUL3-201ENST00000264414 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CUL3-201ENST00000264414 POLR3GLQ9BT43 218 aa22.31■■□□□ 1.16
CUL3-201ENST00000264414 DAXXQ9UER7 740 aaPredicted RBP22.26■■□□□ 1.15
CUL3-201ENST00000264414 MYT1LQ9UL68 1186 aa22.25■■□□□ 1.15
CUL3-201ENST00000264414 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
CUL3-201ENST00000264414 SLC4A1APQ9BWU0 796 aaKnown RBP22.03■■□□□ 1.12
CUL3-201ENST00000264414 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
CUL3-201ENST00000264414 ITGAEP38570 1179 aa21.86■■□□□ 1.09
CUL3-201ENST00000264414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
CUL3-201ENST00000264414 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
CUL3-201ENST00000264414 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
CUL3-201ENST00000264414 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
CUL3-201ENST00000264414 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
CUL3-201ENST00000264414 BCL11AQ9H165 835 aa21.72■■□□□ 1.07
CUL3-201ENST00000264414 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
CUL3-201ENST00000264414 SLC24A1O60721 1099 aa21.52■■□□□ 1.04
CUL3-201ENST00000264414 RTL5Q5HYW3 569 aaPredicted RBP21.49■■□□□ 1.03
CUL3-201ENST00000264414 BCANQ96GW7 911 aa21.25■□□□□ 0.99
CUL3-201ENST00000264414 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.98
CUL3-201ENST00000264414 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.96
CUL3-201ENST00000264414 HRCP23327 699 aa21.02■□□□□ 0.95
CUL3-201ENST00000264414 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
CUL3-201ENST00000264414 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
CUL3-201ENST00000264414 NEUROD1Q13562 356 aa20.95■□□□□ 0.94
CUL3-201ENST00000264414 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
CUL3-201ENST00000264414 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
CUL3-201ENST00000264414 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.94
CUL3-201ENST00000264414 EIF5BO60841 1220 aaKnown RBP20.84■□□□□ 0.93
CUL3-201ENST00000264414 NPM2Q86SE8 214 aaKnown RBP20.83■□□□□ 0.92
CUL3-201ENST00000264414 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
CUL3-201ENST00000264414 DIEXFQ68CQ4 756 aaKnown RBP20.72■□□□□ 0.91
CUL3-201ENST00000264414 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
CUL3-201ENST00000264414 ARXQ96QS3 562 aa20.67■□□□□ 0.9
CUL3-201ENST00000264414 NEFMP07197 916 aa20.62■□□□□ 0.89
CUL3-201ENST00000264414 A0A0G2JS52 829 aa20.57■□□□□ 0.88
CUL3-201ENST00000264414 ARID3CA6NKF2 412 aa20.56■□□□□ 0.88
CUL3-201ENST00000264414 FBLN2P98095 1184 aa20.56■□□□□ 0.88
CUL3-201ENST00000264414 HSP90AA1P07900 732 aaKnown RBP20.56■□□□□ 0.88
CUL3-201ENST00000264414 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
CUL3-201ENST00000264414 ANP32CO43423 234 aa20.53■□□□□ 0.88
CUL3-201ENST00000264414 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
CUL3-201ENST00000264414 TULP1O00294 542 aaPredicted RBP20.49■□□□□ 0.87
CUL3-201ENST00000264414 ANP32BQ92688 251 aaKnown RBP20.49■□□□□ 0.87
CUL3-201ENST00000264414 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
CUL3-201ENST00000264414 ANP32AP39687 249 aaKnown RBP20.44■□□□□ 0.86
CUL3-201ENST00000264414 SALL2Q9Y467 1007 aaPredicted RBP20.4■□□□□ 0.86
CUL3-201ENST00000264414 CDK11BP21127 795 aaKnown RBP20.35■□□□□ 0.85
CUL3-201ENST00000264414 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
CUL3-201ENST00000264414 CHGAP10645 457 aaKnown RBP20.34■□□□□ 0.85
CUL3-201ENST00000264414 NBR1Q14596 966 aa20.3■□□□□ 0.84
CUL3-201ENST00000264414 ZBTB7CA1YPR0 619 aa20.27■□□□□ 0.84
CUL3-201ENST00000264414 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CUL3-201ENST00000264414 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
CUL3-201ENST00000264414 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
CUL3-201ENST00000264414 TPRNQ4KMQ1 711 aa20.25■□□□□ 0.83
CUL3-201ENST00000264414 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
CUL3-201ENST00000264414 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
CUL3-201ENST00000264414 TAOK2Q9UL54 1235 aa20.15■□□□□ 0.82
CUL3-201ENST00000264414 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
CUL3-201ENST00000264414 GLIPR1L2Q4G1C9 344 aa20.1■□□□□ 0.81
CUL3-201ENST00000264414 FKBP8Q14318 412 aa20.09■□□□□ 0.81
CUL3-201ENST00000264414 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
CUL3-201ENST00000264414 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
CUL3-201ENST00000264414 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
CUL3-201ENST00000264414 IRX6P78412 446 aaPredicted RBP19.92■□□□□ 0.78
CUL3-201ENST00000264414 AMER1Q5JTC6 1135 aaPredicted RBP19.92■□□□□ 0.78
CUL3-201ENST00000264414 HNRNPUQ00839 825 aaKnown RBP eCLIP19.91■□□□□ 0.78
CUL3-201ENST00000264414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■■□□□ 11.6
CUL3-201ENST00000264414 SENP3-EIF4A1A0A087X0R7 540 aa19.9■□□□□ 0.78
CUL3-201ENST00000264414 NCLP19338 710 aaKnown RBP19.89■□□□□ 0.77
CUL3-201ENST00000264414 CCDC136Q96JN2 1154 aa19.82■□□□□ 0.76
CUL3-201ENST00000264414 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.8■□□□□ 0.76
CUL3-201ENST00000264414 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
CUL3-201ENST00000264414 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
CUL3-201ENST00000264414 CLSTN1O94985 981 aa19.77■□□□□ 0.76
CUL3-201ENST00000264414 HAP1P54257 671 aaPredicted RBP19.77■□□□□ 0.76
CUL3-201ENST00000264414 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
CUL3-201ENST00000264414 DNTTIP2Q5QJE6 756 aaKnown RBP19.76■□□□□ 0.75
CUL3-201ENST00000264414 DDX10Q13206 875 aaKnown RBP19.75■□□□□ 0.75
CUL3-201ENST00000264414 TRIM44Q96DX7 344 aaPredicted RBP19.74■□□□□ 0.75
CUL3-201ENST00000264414 PTMAP06454 111 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms