RNA–Protein interactions for RNA: ENST00000486825.6

TRIT1-209, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-209ENST00000486825 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
TRIT1-209ENST00000486825 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
TRIT1-209ENST00000486825 ABCC9O60706 1549 aa33.36■■■□□ 2.93
TRIT1-209ENST00000486825 RB1CC1Q8TDY2 1594 aa32.03■■■□□ 2.72
TRIT1-209ENST00000486825 DCAF8L2P0C7V8 631 aa32.01■■■□□ 2.71
TRIT1-209ENST00000486825 NACADO15069 1562 aa31.94■■■□□ 2.7
TRIT1-209ENST00000486825 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
TRIT1-209ENST00000486825 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
TRIT1-209ENST00000486825 DCAF1Q9Y4B6 1507 aa31.4■■■□□ 2.62
TRIT1-209ENST00000486825 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.58
TRIT1-209ENST00000486825 UNC13AQ9UPW8 1703 aa31.15■■■□□ 2.58
TRIT1-209ENST00000486825 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
TRIT1-209ENST00000486825 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
TRIT1-209ENST00000486825 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
TRIT1-209ENST00000486825 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
TRIT1-209ENST00000486825 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.43
TRIT1-209ENST00000486825 CC2D2AQ9P2K1 1620 aa30.15■■■□□ 2.42
TRIT1-209ENST00000486825 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
TRIT1-209ENST00000486825 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
TRIT1-209ENST00000486825 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
TRIT1-209ENST00000486825 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
TRIT1-209ENST00000486825 SMARCA2P51531 1590 aa29.41■■■□□ 2.3
TRIT1-209ENST00000486825 ATAD2BQ9ULI0 1458 aa29.41■■■□□ 2.3
TRIT1-209ENST00000486825 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
TRIT1-209ENST00000486825 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
TRIT1-209ENST00000486825 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
TRIT1-209ENST00000486825 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
TRIT1-209ENST00000486825 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
TRIT1-209ENST00000486825 WIZO95785 1651 aa28.85■■■□□ 2.21
TRIT1-209ENST00000486825 RSF1Q96T23 1441 aaPredicted RBP28.81■■■□□ 2.2
TRIT1-209ENST00000486825 NESP48681 1621 aa28.74■■■□□ 2.19
TRIT1-209ENST00000486825 LAMC3Q9Y6N6 1575 aa28.72■■■□□ 2.19
TRIT1-209ENST00000486825 CADPSQ9ULU8 1353 aa28.63■■■□□ 2.17
TRIT1-209ENST00000486825 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
TRIT1-209ENST00000486825 CUX2O14529 1486 aa28.63■■■□□ 2.17
TRIT1-209ENST00000486825 TOP2AP11388 1531 aaKnown RBP28.56■■■□□ 2.16
TRIT1-209ENST00000486825 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
TRIT1-209ENST00000486825 CFTRP13569 1480 aa28.35■■■□□ 2.13
TRIT1-209ENST00000486825 THOC2Q8NI27 1593 aaKnown RBP28.33■■■□□ 2.12
TRIT1-209ENST00000486825 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
TRIT1-209ENST00000486825 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
TRIT1-209ENST00000486825 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
TRIT1-209ENST00000486825 CEP164Q9UPV0 1460 aa28.26■■■□□ 2.11
TRIT1-209ENST00000486825 DNAJC5Q9H3Z4 198 aa28.13■■■□□ 2.09
TRIT1-209ENST00000486825 WDR62O43379 1518 aa28.12■■■□□ 2.09
TRIT1-209ENST00000486825 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
TRIT1-209ENST00000486825 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
TRIT1-209ENST00000486825 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
TRIT1-209ENST00000486825 ABCC8Q09428 1581 aa27.87■■■□□ 2.05
TRIT1-209ENST00000486825 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
TRIT1-209ENST00000486825 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
TRIT1-209ENST00000486825 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
TRIT1-209ENST00000486825 OSCARQ8IYS5 282 aa27.54■■■□□ 2
TRIT1-209ENST00000486825 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
TRIT1-209ENST00000486825 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
TRIT1-209ENST00000486825 SOGA1O94964 1423 aa27.47■■□□□ 1.99
TRIT1-209ENST00000486825 TARBP1Q13395 1621 aaKnown RBP27.41■■□□□ 1.98
TRIT1-209ENST00000486825 CUX1P39880 1505 aa27.4■■□□□ 1.98
TRIT1-209ENST00000486825 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
TRIT1-209ENST00000486825 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.972e-7■■■■■ 29
TRIT1-209ENST00000486825 RAD54L2Q9Y4B4 1467 aa27.37■■□□□ 1.97
TRIT1-209ENST00000486825 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
TRIT1-209ENST00000486825 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
TRIT1-209ENST00000486825 WDR97A6NE52 1622 aa27.28■■□□□ 1.96
TRIT1-209ENST00000486825 FBLN2P98095 1184 aa27.23■■□□□ 1.95
TRIT1-209ENST00000486825 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.951e-6■■■■■ 58.5
TRIT1-209ENST00000486825 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
TRIT1-209ENST00000486825 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
TRIT1-209ENST00000486825 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
TRIT1-209ENST00000486825 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
TRIT1-209ENST00000486825 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
TRIT1-209ENST00000486825 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
TRIT1-209ENST00000486825 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
TRIT1-209ENST00000486825 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
TRIT1-209ENST00000486825 SNAPC4Q5SXM2 1469 aa27.07■■□□□ 1.92
TRIT1-209ENST00000486825 CHD1O14646 1710 aa27.07■■□□□ 1.92
TRIT1-209ENST00000486825 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
TRIT1-209ENST00000486825 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
TRIT1-209ENST00000486825 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
TRIT1-209ENST00000486825 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
TRIT1-209ENST00000486825 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
TRIT1-209ENST00000486825 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
TRIT1-209ENST00000486825 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
TRIT1-209ENST00000486825 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
TRIT1-209ENST00000486825 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
TRIT1-209ENST00000486825 CYB5RLQ6IPT4 315 aa26.81■■□□□ 1.88
TRIT1-209ENST00000486825 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
TRIT1-209ENST00000486825 CLASP1Q7Z460 1538 aa26.77■■□□□ 1.88
TRIT1-209ENST00000486825 GRIN2AQ12879 1464 aa26.75■■□□□ 1.87
TRIT1-209ENST00000486825 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
TRIT1-209ENST00000486825 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
TRIT1-209ENST00000486825 NUP160Q12769 1436 aa26.64■■□□□ 1.85
TRIT1-209ENST00000486825 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
TRIT1-209ENST00000486825 IGF1RP08069 1367 aa26.61■■□□□ 1.85
TRIT1-209ENST00000486825 CEP170Q5SW79 1584 aa26.56■■□□□ 1.84
TRIT1-209ENST00000486825 CUL7Q14999 1698 aa26.51■■□□□ 1.83
TRIT1-209ENST00000486825 JPH4Q96JJ6 628 aa26.51■■□□□ 1.83
TRIT1-209ENST00000486825 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
TRIT1-209ENST00000486825 SHROOM2Q13796 1616 aa26.42■■□□□ 1.82
TRIT1-209ENST00000486825 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms