RNA–Protein interactions for RNA: ENST00000397375.6

MRPS34-202, Transcript of mitochondrial ribosomal protein S34, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS34, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS34-202ENST00000397375 NISCHQ9Y2I1 1504 aa57.13■■■■■ 6.74
MRPS34-202ENST00000397375 CCDC180Q9P1Z9 1646 aa51.02■■■■■ 5.76
MRPS34-202ENST00000397375 ABCC9O60706 1549 aa50.63■■■■■ 5.7
MRPS34-202ENST00000397375 RB1CC1Q8TDY2 1594 aa48.43■■■■■ 5.34
MRPS34-202ENST00000397375 NACADO15069 1562 aa48.22■■■■■ 5.31
MRPS34-202ENST00000397375 DCAF8L2P0C7V8 631 aa48.11■■■■■ 5.29
MRPS34-202ENST00000397375 MYO15BQ96JP2 1530 aa47.75■■■■■ 5.23
MRPS34-202ENST00000397375 ZCCHC6Q5VYS8 1495 aaKnown RBP47.43■■■■■ 5.18
MRPS34-202ENST00000397375 DCAF1Q9Y4B6 1507 aa47.27■■■■■ 5.16
MRPS34-202ENST00000397375 PABPN1Q86U42 306 aaKnown RBP eCLIP47.23■■■■■ 5.15
MRPS34-202ENST00000397375 DNAJC5BQ9UF47 199 aa47.05■■■■■ 5.12
MRPS34-202ENST00000397375 UNC13AQ9UPW8 1703 aa47.04■■■■■ 5.12
MRPS34-202ENST00000397375 BICRAQ9NZM4 1560 aa46.87■■■■■ 5.09
MRPS34-202ENST00000397375 SHROOM4Q9ULL8 1493 aa46.51■■■■■ 5.04
MRPS34-202ENST00000397375 SCRIBQ14160 1630 aa46.48■■■■■ 5.03
MRPS34-202ENST00000397375 EIF4G1Q04637 1599 aaKnown RBP45.76■■■■■ 4.92
MRPS34-202ENST00000397375 CC2D2AQ9P2K1 1620 aa45.7■■■■■ 4.91
MRPS34-202ENST00000397375 CECR2Q9BXF3 1484 aa45.61■■■■■ 4.89
MRPS34-202ENST00000397375 NCAPD3P42695 1498 aa44.53■■■■■ 4.72
MRPS34-202ENST00000397375 ATAD2BQ9ULI0 1458 aa44.42■■■■■ 4.7
MRPS34-202ENST00000397375 SMARCA4P51532 1647 aa44.41■■■■■ 4.7
MRPS34-202ENST00000397375 SMARCA2P51531 1590 aa44.35■■■■■ 4.69
MRPS34-202ENST00000397375 BAZ1AQ9NRL2 1556 aaPredicted RBP44.35■■■■■ 4.69
MRPS34-202ENST00000397375 HMGXB3Q12766 1538 aa44.2■■■■■ 4.67
MRPS34-202ENST00000397375 BAZ1BQ9UIG0 1483 aaKnown RBP44.03■■■■■ 4.64
MRPS34-202ENST00000397375 PEG3Q9GZU2 1588 aa44.02■■■■■ 4.64
MRPS34-202ENST00000397375 MROH2BQ7Z745 1585 aa43.97■■■■■ 4.63
MRPS34-202ENST00000397375 ERCC6Q03468 1493 aa43.77■■■■■ 4.6
MRPS34-202ENST00000397375 NESP48681 1621 aa43.55■■■■■ 4.56
MRPS34-202ENST00000397375 CUX2O14529 1486 aa43.54■■■■■ 4.56
MRPS34-202ENST00000397375 LAMC3Q9Y6N6 1575 aa43.42■■■■■ 4.54
MRPS34-202ENST00000397375 WIZO95785 1651 aa43.39■■■■■ 4.54
MRPS34-202ENST00000397375 RSF1Q96T23 1441 aaPredicted RBP43.29■■■■■ 4.52
MRPS34-202ENST00000397375 PDS5BQ9NTI5 1447 aa43.26■■■■■ 4.52
MRPS34-202ENST00000397375 CADPSQ9ULU8 1353 aa43.22■■■■■ 4.51
MRPS34-202ENST00000397375 DNAJC5Q9H3Z4 198 aa43.03■■■■■ 4.48
MRPS34-202ENST00000397375 THOC2Q8NI27 1593 aaKnown RBP43.01■■■■■ 4.48
MRPS34-202ENST00000397375 TOP2AP11388 1531 aaKnown RBP42.99■■■■■ 4.47
MRPS34-202ENST00000397375 KIF21AQ7Z4S6 1674 aa42.92■■■■■ 4.46
MRPS34-202ENST00000397375 CFTRP13569 1480 aa42.78■■■■■ 4.44
MRPS34-202ENST00000397375 MRC2Q9UBG0 1479 aa42.78■■■■■ 4.44
MRPS34-202ENST00000397375 CEP164Q9UPV0 1460 aa42.71■■■■■ 4.43
MRPS34-202ENST00000397375 FANCD2Q9BXW9 1451 aa42.68■■■■■ 4.42
MRPS34-202ENST00000397375 WDR62O43379 1518 aa42.61■■■■■ 4.41
MRPS34-202ENST00000397375 CCDC88BA6NC98 1476 aa42.49■■■■■ 4.39
MRPS34-202ENST00000397375 URB2Q14146 1524 aaKnown RBP42.24■■■■■ 4.35
MRPS34-202ENST00000397375 PRDM2Q13029 1718 aa42.17■■■■■ 4.34
MRPS34-202ENST00000397375 ABCC8Q09428 1581 aa41.97■■■■■ 4.31
MRPS34-202ENST00000397375 TOPBP1Q92547 1522 aa41.9■■■■■ 4.3
MRPS34-202ENST00000397375 IFT140Q96RY7 1462 aa41.86■■■■■ 4.29
MRPS34-202ENST00000397375 DNMBPQ6XZF7 1577 aa41.78■■■■■ 4.28
MRPS34-202ENST00000397375 SUPT5HO00267 1087 aaKnown RBP41.73■■■■■ 4.27
MRPS34-202ENST00000397375 OSCARQ8IYS5 282 aa41.68■■■■■ 4.26
MRPS34-202ENST00000397375 ZNF608Q9ULD9 1512 aaPredicted RBP41.64■■■■■ 4.26
MRPS34-202ENST00000397375 POLA1P09884 1462 aaPredicted RBP41.49■■■■■ 4.23
MRPS34-202ENST00000397375 TARBP1Q13395 1621 aaKnown RBP41.42■■■■■ 4.22
MRPS34-202ENST00000397375 EIF4G3O43432 1585 aaKnown RBP41.41■■■■■ 4.22
MRPS34-202ENST00000397375 SOGA1O94964 1423 aa41.38■■■■■ 4.22
MRPS34-202ENST00000397375 AQRO60306 1485 aaKnown RBP eCLIP41.35■■■■■ 4.212e-7■■■■■ 42.3
MRPS34-202ENST00000397375 RAD54L2Q9Y4B4 1467 aa41.3■■■■■ 4.2
MRPS34-202ENST00000397375 TRIM41Q8WV44 630 aa41.3■■■■■ 4.2
MRPS34-202ENST00000397375 CUX1P39880 1505 aa41.29■■■■■ 4.2
MRPS34-202ENST00000397375 FGD5Q6ZNL6 1462 aa41.29■■■■■ 4.2
MRPS34-202ENST00000397375 TDRD9Q8NDG6 1382 aaKnown RBP41.21■■■■■ 4.19
MRPS34-202ENST00000397375 WDR97A6NE52 1622 aa41.15■■■■■ 4.18
MRPS34-202ENST00000397375 FBLN2P98095 1184 aa41.09■■■■■ 4.17
MRPS34-202ENST00000397375 GRIN2BQ13224 1484 aa40.97■■■■■ 4.15
MRPS34-202ENST00000397375 SNAPC4Q5SXM2 1469 aa40.96■■■■■ 4.15
MRPS34-202ENST00000397375 MAGI1Q96QZ7 1491 aaPredicted RBP40.93■■■■■ 4.14
MRPS34-202ENST00000397375 CHD1O14646 1710 aa40.93■■■■■ 4.14
MRPS34-202ENST00000397375 CHMP7Q8WUX9 453 aaPredicted RBP40.9■■■■■ 4.14
MRPS34-202ENST00000397375 RIMBP3CA6NJZ7 1639 aa40.89■■■■■ 4.14
MRPS34-202ENST00000397375 RIMBP3BA6NNM3 1639 aa40.89■■■■■ 4.14
MRPS34-202ENST00000397375 RIMBP3Q9UFD9 1639 aa40.89■■■■■ 4.14
MRPS34-202ENST00000397375 ABCA10Q8WWZ4 1543 aa40.89■■■■■ 4.14
MRPS34-202ENST00000397375 ARHGEF11O15085 1522 aa40.88■■■■■ 4.14
MRPS34-202ENST00000397375 WRNQ14191 1432 aaPredicted RBP eCLIP40.88■■■■■ 4.13
MRPS34-202ENST00000397375 GAPVD1Q14C86 1478 aa40.87■■■■■ 4.13
MRPS34-202ENST00000397375 SYNJ2O15056 1496 aa40.77■■■■■ 4.12
MRPS34-202ENST00000397375 TOP2BQ02880 1626 aa40.76■■■■■ 4.12
MRPS34-202ENST00000397375 BIVM-ERCC5R4GMW8 1640 aa40.71■■■■■ 4.11
MRPS34-202ENST00000397375 ABCA5Q8WWZ7 1642 aa40.69■■■■■ 4.1
MRPS34-202ENST00000397375 SYNJ1O43426 1573 aa40.68■■■■■ 4.1
MRPS34-202ENST00000397375 PBRM1Q86U86 1689 aa40.64■■■■■ 4.1
MRPS34-202ENST00000397375 CYB5RLQ6IPT4 315 aa40.63■■■■■ 4.09
MRPS34-202ENST00000397375 CLASP1Q7Z460 1538 aa40.59■■■■■ 4.09
MRPS34-202ENST00000397375 ARAP1Q96P48 1450 aa40.5■■■■■ 4.07
MRPS34-202ENST00000397375 GRIN2AQ12879 1464 aa40.41■■■■■ 4.06
MRPS34-202ENST00000397375 FHAD1B1AJZ9 1412 aa40.41■■■■■ 4.06
MRPS34-202ENST00000397375 ERICH3Q5RHP9 1530 aa40.39■■■■■ 4.06
MRPS34-202ENST00000397375 ADAMTS12P58397 1594 aa40.38■■■■■ 4.05
MRPS34-202ENST00000397375 NUP160Q12769 1436 aa40.26■■■■■ 4.04
MRPS34-202ENST00000397375 CEP170Q5SW79 1584 aa40.15■■■■■ 4.02
MRPS34-202ENST00000397375 KIF27Q86VH2 1401 aa40.11■■■■■ 4.01
MRPS34-202ENST00000397375 TRHP20396 242 aaPredicted RBP40.08■■■■■ 4.01
MRPS34-202ENST00000397375 IGF1RP08069 1367 aa39.99■■■■□ 3.99
MRPS34-202ENST00000397375 SHROOM2Q13796 1616 aa39.94■■■■□ 3.98
MRPS34-202ENST00000397375 JPH4Q96JJ6 628 aa39.92■■■■□ 3.98
MRPS34-202ENST00000397375 ERCC6L2Q5T890 1561 aa39.91■■■■□ 3.98
MRPS34-202ENST00000397375 PRG4Q92954 1404 aaPredicted RBP39.85■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms