RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 NISCHQ9Y2I1 1504 aa39.07■■■■□ 3.84
CLK4-205ENST00000520199 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
CLK4-205ENST00000520199 ABCC9O60706 1549 aa34.63■■■■□ 3.13
CLK4-205ENST00000520199 RB1CC1Q8TDY2 1594 aa33.02■■■□□ 2.88
CLK4-205ENST00000520199 NACADO15069 1562 aa32.89■■■□□ 2.86
CLK4-205ENST00000520199 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
CLK4-205ENST00000520199 UNC13AQ9UPW8 1703 aa32.56■■■□□ 2.8
CLK4-205ENST00000520199 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
CLK4-205ENST00000520199 ZCCHC6Q5VYS8 1495 aaKnown RBP32.45■■■□□ 2.79
CLK4-205ENST00000520199 DNAJC5BQ9UF47 199 aa32.41■■■□□ 2.78
CLK4-205ENST00000520199 PABPN1Q86U42 306 aaKnown RBP eCLIP32.29■■■□□ 2.76
CLK4-205ENST00000520199 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
CLK4-205ENST00000520199 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
CLK4-205ENST00000520199 SCRIBQ14160 1630 aa31.84■■■□□ 2.69
CLK4-205ENST00000520199 SHROOM4Q9ULL8 1493 aa31.6■■■□□ 2.65
CLK4-205ENST00000520199 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
CLK4-205ENST00000520199 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
CLK4-205ENST00000520199 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
CLK4-205ENST00000520199 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
CLK4-205ENST00000520199 NCAPD3P42695 1498 aa30.4■■■□□ 2.46
CLK4-205ENST00000520199 ATAD2BQ9ULI0 1458 aa30.37■■■□□ 2.45
CLK4-205ENST00000520199 BAZ1AQ9NRL2 1556 aaPredicted RBP30.23■■■□□ 2.43
CLK4-205ENST00000520199 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
CLK4-205ENST00000520199 HMGXB3Q12766 1538 aa30.18■■■□□ 2.42
CLK4-205ENST00000520199 MROH2BQ7Z745 1585 aa30.17■■■□□ 2.42
CLK4-205ENST00000520199 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
CLK4-205ENST00000520199 BAZ1BQ9UIG0 1483 aaKnown RBP30■■■□□ 2.39
CLK4-205ENST00000520199 NESP48681 1621 aa29.92■■■□□ 2.38
CLK4-205ENST00000520199 WIZO95785 1651 aa29.84■■■□□ 2.37
CLK4-205ENST00000520199 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
CLK4-205ENST00000520199 CUX2O14529 1486 aa29.65■■■□□ 2.34
CLK4-205ENST00000520199 LAMC3Q9Y6N6 1575 aa29.64■■■□□ 2.33
CLK4-205ENST00000520199 RSF1Q96T23 1441 aaPredicted RBP29.61■■■□□ 2.33
CLK4-205ENST00000520199 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
CLK4-205ENST00000520199 THOC2Q8NI27 1593 aaKnown RBP29.55■■■□□ 2.32
CLK4-205ENST00000520199 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.31
CLK4-205ENST00000520199 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
CLK4-205ENST00000520199 TOP2AP11388 1531 aaKnown RBP29.38■■■□□ 2.29
CLK4-205ENST00000520199 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
CLK4-205ENST00000520199 CFTRP13569 1480 aa29.22■■■□□ 2.27
CLK4-205ENST00000520199 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
CLK4-205ENST00000520199 WDR62O43379 1518 aa29.15■■■□□ 2.26
CLK4-205ENST00000520199 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
CLK4-205ENST00000520199 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
CLK4-205ENST00000520199 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
CLK4-205ENST00000520199 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
CLK4-205ENST00000520199 URB2Q14146 1524 aaKnown RBP28.96■■■□□ 2.23
CLK4-205ENST00000520199 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
CLK4-205ENST00000520199 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
CLK4-205ENST00000520199 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
CLK4-205ENST00000520199 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
CLK4-205ENST00000520199 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
CLK4-205ENST00000520199 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
CLK4-205ENST00000520199 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
CLK4-205ENST00000520199 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
CLK4-205ENST00000520199 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
CLK4-205ENST00000520199 CUX1P39880 1505 aa28.32■■■□□ 2.12
CLK4-205ENST00000520199 OSCARQ8IYS5 282 aa28.31■■■□□ 2.12
CLK4-205ENST00000520199 AQRO60306 1485 aaKnown RBP eCLIP28.29■■■□□ 2.125e-7■■■□□ 18.2
CLK4-205ENST00000520199 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
CLK4-205ENST00000520199 FGD5Q6ZNL6 1462 aa28.22■■■□□ 2.11
CLK4-205ENST00000520199 SOGA1O94964 1423 aa28.18■■■□□ 2.1
CLK4-205ENST00000520199 CHD1O14646 1710 aa28.17■■■□□ 2.1
CLK4-205ENST00000520199 TDRD9Q8NDG6 1382 aaKnown RBP28.13■■■□□ 2.09
CLK4-205ENST00000520199 WDR97A6NE52 1622 aa28.11■■■□□ 2.09
CLK4-205ENST00000520199 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
CLK4-205ENST00000520199 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
CLK4-205ENST00000520199 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
CLK4-205ENST00000520199 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
CLK4-205ENST00000520199 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
CLK4-205ENST00000520199 ARHGEF11O15085 1522 aa27.96■■■□□ 2.07
CLK4-205ENST00000520199 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
CLK4-205ENST00000520199 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
CLK4-205ENST00000520199 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
CLK4-205ENST00000520199 ABCA5Q8WWZ7 1642 aa27.91■■■□□ 2.06
CLK4-205ENST00000520199 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
CLK4-205ENST00000520199 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
CLK4-205ENST00000520199 TOP2BQ02880 1626 aa27.89■■■□□ 2.05
CLK4-205ENST00000520199 FBLN2P98095 1184 aa27.88■■■□□ 2.05
CLK4-205ENST00000520199 MAGI1Q96QZ7 1491 aaPredicted RBP27.87■■■□□ 2.05
CLK4-205ENST00000520199 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
CLK4-205ENST00000520199 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.05
CLK4-205ENST00000520199 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
CLK4-205ENST00000520199 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
CLK4-205ENST00000520199 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
CLK4-205ENST00000520199 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
CLK4-205ENST00000520199 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
CLK4-205ENST00000520199 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
CLK4-205ENST00000520199 GRIN2AQ12879 1464 aa27.57■■■□□ 2
CLK4-205ENST00000520199 CEP170Q5SW79 1584 aa27.55■■■□□ 2
CLK4-205ENST00000520199 ERICH3Q5RHP9 1530 aa27.54■■■□□ 2
CLK4-205ENST00000520199 NUP160Q12769 1436 aa27.5■■□□□ 1.99
CLK4-205ENST00000520199 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
CLK4-205ENST00000520199 ERCC6L2Q5T890 1561 aa27.49■■□□□ 1.99
CLK4-205ENST00000520199 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
CLK4-205ENST00000520199 IGF1RP08069 1367 aa27.32■■□□□ 1.96
CLK4-205ENST00000520199 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
CLK4-205ENST00000520199 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
CLK4-205ENST00000520199 CUL7Q14999 1698 aa27.18■■□□□ 1.94
CLK4-205ENST00000520199 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms