RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
AC055860.1-201ENST00000525523 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
AC055860.1-201ENST00000525523 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
AC055860.1-201ENST00000525523 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
AC055860.1-201ENST00000525523 ABCC9O60706 1549 aa18.17■□□□□ 0.5
AC055860.1-201ENST00000525523 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
AC055860.1-201ENST00000525523 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
AC055860.1-201ENST00000525523 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
AC055860.1-201ENST00000525523 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
AC055860.1-201ENST00000525523 FOXD1Q16676 465 aa16.98■□□□□ 0.31
AC055860.1-201ENST00000525523 NACADO15069 1562 aa16.86■□□□□ 0.29
AC055860.1-201ENST00000525523 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
AC055860.1-201ENST00000525523 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
AC055860.1-201ENST00000525523 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
AC055860.1-201ENST00000525523 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
AC055860.1-201ENST00000525523 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
AC055860.1-201ENST00000525523 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
AC055860.1-201ENST00000525523 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
AC055860.1-201ENST00000525523 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
AC055860.1-201ENST00000525523 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
AC055860.1-201ENST00000525523 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
AC055860.1-201ENST00000525523 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
AC055860.1-201ENST00000525523 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
AC055860.1-201ENST00000525523 CUX2O14529 1486 aa16.03■□□□□ 0.16
AC055860.1-201ENST00000525523 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
AC055860.1-201ENST00000525523 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
AC055860.1-201ENST00000525523 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
AC055860.1-201ENST00000525523 ADRA2BP18089 450 aa15.85■□□□□ 0.13
AC055860.1-201ENST00000525523 MSH5O43196 834 aa15.84■□□□□ 0.13
AC055860.1-201ENST00000525523 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
AC055860.1-201ENST00000525523 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
AC055860.1-201ENST00000525523 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
AC055860.1-201ENST00000525523 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
AC055860.1-201ENST00000525523 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
AC055860.1-201ENST00000525523 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
AC055860.1-201ENST00000525523 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
AC055860.1-201ENST00000525523 NESP48681 1621 aa15.42■□□□□ 0.06
AC055860.1-201ENST00000525523 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
AC055860.1-201ENST00000525523 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
AC055860.1-201ENST00000525523 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
AC055860.1-201ENST00000525523 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
AC055860.1-201ENST00000525523 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
AC055860.1-201ENST00000525523 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
AC055860.1-201ENST00000525523 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
AC055860.1-201ENST00000525523 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
AC055860.1-201ENST00000525523 WDR62O43379 1518 aa15.16■□□□□ 0.02
AC055860.1-201ENST00000525523 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
AC055860.1-201ENST00000525523 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
AC055860.1-201ENST00000525523 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
AC055860.1-201ENST00000525523 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
AC055860.1-201ENST00000525523 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
AC055860.1-201ENST00000525523 OSCARQ8IYS5 282 aa15.02■□□□□ -0
AC055860.1-201ENST00000525523 CADPSQ9ULU8 1353 aa14.97□□□□□ -0.01
AC055860.1-201ENST00000525523 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
AC055860.1-201ENST00000525523 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
AC055860.1-201ENST00000525523 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
AC055860.1-201ENST00000525523 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
AC055860.1-201ENST00000525523 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
AC055860.1-201ENST00000525523 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
AC055860.1-201ENST00000525523 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
AC055860.1-201ENST00000525523 CFTRP13569 1480 aa14.71□□□□□ -0.05
AC055860.1-201ENST00000525523 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
AC055860.1-201ENST00000525523 CHD1O14646 1710 aa14.69□□□□□ -0.06
AC055860.1-201ENST00000525523 WIZO95785 1651 aa14.68□□□□□ -0.06
AC055860.1-201ENST00000525523 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
AC055860.1-201ENST00000525523 IFT140Q96RY7 1462 aa14.67□□□□□ -0.06
AC055860.1-201ENST00000525523 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
AC055860.1-201ENST00000525523 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
AC055860.1-201ENST00000525523 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
AC055860.1-201ENST00000525523 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
AC055860.1-201ENST00000525523 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
AC055860.1-201ENST00000525523 TOPBP1Q92547 1522 aa14.5□□□□□ -0.09
AC055860.1-201ENST00000525523 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
AC055860.1-201ENST00000525523 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
AC055860.1-201ENST00000525523 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.09
AC055860.1-201ENST00000525523 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
AC055860.1-201ENST00000525523 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
AC055860.1-201ENST00000525523 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
AC055860.1-201ENST00000525523 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
AC055860.1-201ENST00000525523 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
AC055860.1-201ENST00000525523 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
AC055860.1-201ENST00000525523 FBLN2P98095 1184 aa14.37□□□□□ -0.11
AC055860.1-201ENST00000525523 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
AC055860.1-201ENST00000525523 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
AC055860.1-201ENST00000525523 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
AC055860.1-201ENST00000525523 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
AC055860.1-201ENST00000525523 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
AC055860.1-201ENST00000525523 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
AC055860.1-201ENST00000525523 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
AC055860.1-201ENST00000525523 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
AC055860.1-201ENST00000525523 PBRM1Q86U86 1689 aa14.21□□□□□ -0.13
AC055860.1-201ENST00000525523 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
AC055860.1-201ENST00000525523 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
AC055860.1-201ENST00000525523 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
AC055860.1-201ENST00000525523 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
AC055860.1-201ENST00000525523 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
AC055860.1-201ENST00000525523 SOGA1O94964 1423 aa14.16□□□□□ -0.14
AC055860.1-201ENST00000525523 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
AC055860.1-201ENST00000525523 ERCC6L2Q5T890 1561 aa14.1□□□□□ -0.15
AC055860.1-201ENST00000525523 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms