RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, humanhuman

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERGEF-223ENST00000533328 NISCHQ9Y2I1 1504 aa51.62■■■■■ 5.85
SERGEF-223ENST00000533328 CCDC180Q9P1Z9 1646 aa45.9■■■■■ 4.94
SERGEF-223ENST00000533328 ABCC9O60706 1549 aa44.85■■■■■ 4.77
SERGEF-223ENST00000533328 RB1CC1Q8TDY2 1594 aa43.15■■■■■ 4.5
SERGEF-223ENST00000533328 NACADO15069 1562 aa43.12■■■■■ 4.49
SERGEF-223ENST00000533328 ZCCHC6Q5VYS8 1495 aaKnown RBP43■■■■■ 4.47
SERGEF-223ENST00000533328 DCAF8L2P0C7V8 631 aa42.98■■■■■ 4.47
SERGEF-223ENST00000533328 MYO15BQ96JP2 1530 aa42.9■■■■■ 4.46
SERGEF-223ENST00000533328 DCAF1Q9Y4B6 1507 aa42.72■■■■■ 4.43
SERGEF-223ENST00000533328 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
SERGEF-223ENST00000533328 BICRAQ9NZM4 1560 aa41.95■■■■■ 4.31
SERGEF-223ENST00000533328 PABPN1Q86U42 306 aaKnown RBP eCLIP41.9■■■■■ 4.3
SERGEF-223ENST00000533328 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
SERGEF-223ENST00000533328 SHROOM4Q9ULL8 1493 aa41.41■■■■■ 4.22
SERGEF-223ENST00000533328 DNAJC5BQ9UF47 199 aa41.25■■■■■ 4.19
SERGEF-223ENST00000533328 EIF4G1Q04637 1599 aaKnown RBP40.77■■■■■ 4.12
SERGEF-223ENST00000533328 CC2D2AQ9P2K1 1620 aa40.61■■■■■ 4.09
SERGEF-223ENST00000533328 CECR2Q9BXF3 1484 aa40.29■■■■■ 4.04
SERGEF-223ENST00000533328 SMARCA4P51532 1647 aa40.05■■■■■ 4
SERGEF-223ENST00000533328 BAZ1AQ9NRL2 1556 aaPredicted RBP39.97■■■■□ 3.99
SERGEF-223ENST00000533328 ATAD2BQ9ULI0 1458 aa39.82■■■■□ 3.97
SERGEF-223ENST00000533328 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
SERGEF-223ENST00000533328 MROH2BQ7Z745 1585 aa39.79■■■■□ 3.96
SERGEF-223ENST00000533328 SMARCA2P51531 1590 aa39.75■■■■□ 3.95
SERGEF-223ENST00000533328 PEG3Q9GZU2 1588 aa39.69■■■■□ 3.94
SERGEF-223ENST00000533328 HMGXB3Q12766 1538 aa39.6■■■■□ 3.93
SERGEF-223ENST00000533328 BAZ1BQ9UIG0 1483 aaKnown RBP39.44■■■■□ 3.9
SERGEF-223ENST00000533328 WIZO95785 1651 aa39.37■■■■□ 3.89
SERGEF-223ENST00000533328 RSF1Q96T23 1441 aaPredicted RBP39.32■■■■□ 3.89
SERGEF-223ENST00000533328 TOP2AP11388 1531 aaKnown RBP38.91■■■■□ 3.82
SERGEF-223ENST00000533328 NESP48681 1621 aa38.85■■■■□ 3.81
SERGEF-223ENST00000533328 LAMC3Q9Y6N6 1575 aa38.74■■■■□ 3.79
SERGEF-223ENST00000533328 CADPSQ9ULU8 1353 aa38.61■■■■□ 3.77
SERGEF-223ENST00000533328 ERCC6Q03468 1493 aa38.59■■■■□ 3.77
SERGEF-223ENST00000533328 CCDC88BA6NC98 1476 aa38.47■■■■□ 3.75
SERGEF-223ENST00000533328 PDS5BQ9NTI5 1447 aa38.43■■■■□ 3.74
SERGEF-223ENST00000533328 KIF21AQ7Z4S6 1674 aa38.42■■■■□ 3.74
SERGEF-223ENST00000533328 CFTRP13569 1480 aa38.41■■■■□ 3.74
SERGEF-223ENST00000533328 THOC2Q8NI27 1593 aaKnown RBP38.28■■■■□ 3.72
SERGEF-223ENST00000533328 CUX2O14529 1486 aa38.24■■■■□ 3.71
SERGEF-223ENST00000533328 SUPT5HO00267 1087 aaKnown RBP38.23■■■■□ 3.71
SERGEF-223ENST00000533328 PRDM2Q13029 1718 aa38.17■■■■□ 3.7
SERGEF-223ENST00000533328 FANCD2Q9BXW9 1451 aa38.16■■■■□ 3.7
SERGEF-223ENST00000533328 CEP164Q9UPV0 1460 aa38.1■■■■□ 3.69
SERGEF-223ENST00000533328 MRC2Q9UBG0 1479 aa38.06■■■■□ 3.68
SERGEF-223ENST00000533328 WDR62O43379 1518 aa37.97■■■■□ 3.67
SERGEF-223ENST00000533328 URB2Q14146 1524 aaKnown RBP37.83■■■■□ 3.65
SERGEF-223ENST00000533328 TOPBP1Q92547 1522 aa37.58■■■■□ 3.61
SERGEF-223ENST00000533328 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
SERGEF-223ENST00000533328 DNMBPQ6XZF7 1577 aa37.53■■■■□ 3.6
SERGEF-223ENST00000533328 CUX1P39880 1505 aa37.32■■■■□ 3.57
SERGEF-223ENST00000533328 IFT140Q96RY7 1462 aa37.32■■■■□ 3.56
SERGEF-223ENST00000533328 POLA1P09884 1462 aaPredicted RBP37.26■■■■□ 3.56
SERGEF-223ENST00000533328 TARBP1Q13395 1621 aaKnown RBP37.22■■■■□ 3.55
SERGEF-223ENST00000533328 ZNF608Q9ULD9 1512 aaPredicted RBP37.19■■■■□ 3.54
SERGEF-223ENST00000533328 FGD5Q6ZNL6 1462 aa37.16■■■■□ 3.54
SERGEF-223ENST00000533328 RAD54L2Q9Y4B4 1467 aa37.1■■■■□ 3.53
SERGEF-223ENST00000533328 DNAJC5Q9H3Z4 198 aa37.09■■■■□ 3.53
SERGEF-223ENST00000533328 SOGA1O94964 1423 aa37.09■■■■□ 3.53
SERGEF-223ENST00000533328 EIF4G3O43432 1585 aaKnown RBP37.03■■■■□ 3.52
SERGEF-223ENST00000533328 WRNQ14191 1432 aaPredicted RBP eCLIP37.02■■■■□ 3.52
SERGEF-223ENST00000533328 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
SERGEF-223ENST00000533328 SYNJ1O43426 1573 aa37■■■■□ 3.51
SERGEF-223ENST00000533328 TOP2BQ02880 1626 aa36.99■■■■□ 3.51
SERGEF-223ENST00000533328 AQRO60306 1485 aaKnown RBP eCLIP36.95■■■■□ 3.51
SERGEF-223ENST00000533328 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
SERGEF-223ENST00000533328 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
SERGEF-223ENST00000533328 ABCA10Q8WWZ4 1543 aa36.81■■■■□ 3.48
SERGEF-223ENST00000533328 ABCA5Q8WWZ7 1642 aa36.7■■■■□ 3.47
SERGEF-223ENST00000533328 GAPVD1Q14C86 1478 aa36.65■■■■□ 3.46
SERGEF-223ENST00000533328 GRIN2BQ13224 1484 aa36.64■■■■□ 3.46
SERGEF-223ENST00000533328 OSCARQ8IYS5 282 aa36.63■■■■□ 3.45
SERGEF-223ENST00000533328 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
SERGEF-223ENST00000533328 SNAPC4Q5SXM2 1469 aa36.6■■■■□ 3.45
SERGEF-223ENST00000533328 CHD1O14646 1710 aa36.59■■■■□ 3.45
SERGEF-223ENST00000533328 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
SERGEF-223ENST00000533328 SYNJ2O15056 1496 aa36.42■■■■□ 3.42
SERGEF-223ENST00000533328 FBLN2P98095 1184 aa36.41■■■■□ 3.42
SERGEF-223ENST00000533328 ERICH3Q5RHP9 1530 aa36.37■■■■□ 3.41
SERGEF-223ENST00000533328 CHMP7Q8WUX9 453 aaPredicted RBP36.34■■■■□ 3.41
SERGEF-223ENST00000533328 ADAMTS12P58397 1594 aa36.32■■■■□ 3.4
SERGEF-223ENST00000533328 KIF27Q86VH2 1401 aa36.24■■■■□ 3.39
SERGEF-223ENST00000533328 FHAD1B1AJZ9 1412 aa36.23■■■■□ 3.39
SERGEF-223ENST00000533328 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
SERGEF-223ENST00000533328 GRIN2AQ12879 1464 aa36.19■■■■□ 3.38
SERGEF-223ENST00000533328 IGF1RP08069 1367 aa36.15■■■■□ 3.38
SERGEF-223ENST00000533328 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
SERGEF-223ENST00000533328 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
SERGEF-223ENST00000533328 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
SERGEF-223ENST00000533328 TRIM41Q8WV44 630 aa36.1■■■■□ 3.37
SERGEF-223ENST00000533328 ARHGEF11O15085 1522 aa36.08■■■■□ 3.37
SERGEF-223ENST00000533328 NUP160Q12769 1436 aa36.06■■■■□ 3.36
SERGEF-223ENST00000533328 CEP170Q5SW79 1584 aa36.04■■■■□ 3.36
SERGEF-223ENST00000533328 CUL7Q14999 1698 aa36.03■■■■□ 3.36
SERGEF-223ENST00000533328 RUSC2Q8N2Y8 1516 aa36■■■■□ 3.35
SERGEF-223ENST00000533328 CARMIL1Q5VZK9 1371 aa35.89■■■■□ 3.34
SERGEF-223ENST00000533328 SHROOM2Q13796 1616 aa35.82■■■■□ 3.32
SERGEF-223ENST00000533328 ARAP1Q96P48 1450 aa35.8■■■■□ 3.32
SERGEF-223ENST00000533328 CHIC1Q5VXU3 224 aa35.75■■■■□ 3.31
SERGEF-223ENST00000533328 ERCC6L2Q5T890 1561 aa35.72■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms