Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.819e-8■□□□□ 10.8
LARP4Q71RC2 LAMTOR1-203ENST00000535872 899 ntTSL 512.98□□□□□ -0.339e-8■□□□□ 10.8
LARP4Q71RC2 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC10.41□□□□□ -0.749e-8■□□□□ 10.8
LARP4Q71RC2 LAMTOR1-204ENST00000538404 1346 ntTSL 2 BASIC10.04□□□□□ -0.89e-8■□□□□ 10.8
LARP4Q71RC2 LAMTOR1-202ENST00000535107 619 ntTSL 3 BASIC9.85□□□□□ -0.839e-8■□□□□ 10.8
LARP4Q71RC2 LAMTOR1-207ENST00000544594 849 ntTSL 38.69□□□□□ -1.029e-8■□□□□ 10.8
LARP4Q71RC2 SYMPK-209ENST00000598155 1603 ntTSL 518.31■□□□□ 0.521e-7■□□□□ 10.8
LARP4Q71RC2 SYMPK-202ENST00000593504 5107 ntTSL 214.68□□□□□ -0.061e-7■□□□□ 10.8
LARP4Q71RC2 SYMPK-215ENST00000600237 5164 ntTSL 513.82□□□□□ -0.21e-7■□□□□ 10.8
LARP4Q71RC2 SYMPK-211ENST00000598364 995 ntTSL 313.06□□□□□ -0.321e-7■□□□□ 10.8
LARP4Q71RC2 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.431e-7■□□□□ 10.8
LARP4Q71RC2 C3-218ENST00000602229 585 ntTSL 210.23□□□□□ -0.772e-37■□□□□ 10.8
LARP4Q71RC2 C3-212ENST00000599899 1992 ntTSL 28.79□□□□□ -12e-37■□□□□ 10.8
LARP4Q71RC2 C3-215ENST00000601008 303 ntTSL 58.17□□□□□ -1.12e-37■□□□□ 10.8
LARP4Q71RC2 C3-216ENST00000601475 368 ntTSL 28□□□□□ -1.132e-37■□□□□ 10.8
LARP4Q71RC2 C3-211ENST00000599668 627 ntTSL 37.78□□□□□ -1.162e-37■□□□□ 10.8
LARP4Q71RC2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.492e-7■□□□□ 10.8
LARP4Q71RC2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.452e-7■□□□□ 10.8
LARP4Q71RC2 ANG-203ENST00000554073 251 ntTSL 32.67□□□□□ -1.982e-7■□□□□ 10.8
LARP4Q71RC2 TOMM22-202ENST00000492561 782 ntTSL 217.14■□□□□ 0.336e-7■□□□□ 10.8
LARP4Q71RC2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.286e-7■□□□□ 10.8
LARP4Q71RC2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.532e-7■□□□□ 10.8
LARP4Q71RC2 NDUFB4-202ENST00000461682 821 ntTSL 314.03□□□□□ -0.167e-7■□□□□ 10.8
LARP4Q71RC2 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.781e-6■□□□□ 10.8
LARP4Q71RC2 GSTP1-206ENST00000495996 221 ntTSL 28.2□□□□□ -1.12e-8■□□□□ 10.8
LARP4Q71RC2 GTF3C1-205ENST00000564747 2798 nt15.53■□□□□ 0.088e-9■□□□□ 10.8
LARP4Q71RC2 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.758e-9■□□□□ 10.8
LARP4Q71RC2 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.868e-9■□□□□ 10.8
LARP4Q71RC2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.44■■□□□ 1.54e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.474e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.254e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.224e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.31■□□□□ 0.24e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-224ENST00000584460 1855 ntTSL 216.23■□□□□ 0.194e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.094e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.34■□□□□ 0.054e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-205ENST00000578168 583 ntTSL 214.78□□□□□ -0.044e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-203ENST00000392357 4076 ntTSL 1 (best)13.77□□□□□ -0.214e-8■□□□□ 10.8
LARP4Q71RC2 GPS1-218ENST00000583486 796 ntTSL 213.2□□□□□ -0.34e-8■□□□□ 10.8
LARP4Q71RC2 TMEM214-202ENST00000321326 2700 ntTSL 220.27■□□□□ 0.842e-7■□□□□ 10.8
LARP4Q71RC2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.2■□□□□ 0.662e-7■□□□□ 10.8
LARP4Q71RC2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.472e-7■□□□□ 10.8
LARP4Q71RC2 MGST2-203ENST00000503816 1780 ntTSL 516.21■□□□□ 0.182e-20■□□□□ 10.8
LARP4Q71RC2 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.062e-20■□□□□ 10.8
LARP4Q71RC2 MGST2-206ENST00000515137 1013 ntTSL 1 (best)8.04□□□□□ -1.122e-20■□□□□ 10.8
LARP4Q71RC2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.372e-20■□□□□ 10.8
LARP4Q71RC2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.06□□□□□ -1.442e-20■□□□□ 10.8
LARP4Q71RC2 PRELID1-202ENST00000502670 587 ntTSL 320.89■□□□□ 0.938e-7■□□□□ 10.8
LARP4Q71RC2 RPL13A-206ENST00000476268 1623 ntTSL 317.68■□□□□ 0.426e-46■□□□□ 10.8
LARP4Q71RC2 RPL13A-209ENST00000479992 850 ntTSL 314.75□□□□□ -0.056e-46■□□□□ 10.8
LARP4Q71RC2 RPL13A-204ENST00000472481 728 ntTSL 214.18□□□□□ -0.146e-46■□□□□ 10.8
LARP4Q71RC2 RPL13A-211ENST00000486930 652 ntTSL 314.16□□□□□ -0.146e-46■□□□□ 10.8
LARP4Q71RC2 RPL13A-202ENST00000467825 660 ntTSL 513.69□□□□□ -0.226e-46■□□□□ 10.8
LARP4Q71RC2 RPL13A-210ENST00000484279 794 ntTSL 512.59□□□□□ -0.396e-46■□□□□ 10.8
LARP4Q71RC2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.33e-6■□□□□ 10.8
LARP4Q71RC2 SKP1-212ENST00000523966 899 ntTSL 35.04□□□□□ -1.63e-6■□□□□ 10.8
LARP4Q71RC2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.643e-6■□□□□ 10.8
LARP4Q71RC2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.763e-6■□□□□ 10.8
LARP4Q71RC2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.03□□□□□ -1.763e-6■□□□□ 10.8
LARP4Q71RC2 SKP1-204ENST00000517691 2033 ntTSL 1 (best)2.61□□□□□ -1.993e-6■□□□□ 10.8
LARP4Q71RC2 CSNK2B-206ENST00000468255 1792 ntTSL 515.02□□□□□ -0.016e-8■□□□□ 10.8
LARP4Q71RC2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.116e-8■□□□□ 10.8
LARP4Q71RC2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.336e-8■□□□□ 10.8
LARP4Q71RC2 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.616e-8■□□□□ 10.8
LARP4Q71RC2 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC11.03□□□□□ -0.646e-8■□□□□ 10.8
LARP4Q71RC2 CSNK2B-204ENST00000375885 1061 ntTSL 5 BASIC10.17□□□□□ -0.786e-8■□□□□ 10.8
LARP4Q71RC2 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.226e-8■□□□□ 10.8
LARP4Q71RC2 RPL6-208ENST00000550566 1014 ntTSL 315.34■□□□□ 0.057e-9■□□□□ 10.8
LARP4Q71RC2 RPL6-206ENST00000549847 588 ntTSL 29.4□□□□□ -0.97e-9■□□□□ 10.8
LARP4Q71RC2 RPL6-213ENST00000553213 438 ntTSL 58.13□□□□□ -1.117e-9■□□□□ 10.8
LARP4Q71RC2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.13e-7■□□□□ 10.8
LARP4Q71RC2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.063e-7■□□□□ 10.8
LARP4Q71RC2 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.583e-7■□□□□ 10.8
LARP4Q71RC2 SLIRP-207ENST00000556831 729 ntTSL 212.93□□□□□ -0.343e-8■□□□□ 10.8
LARP4Q71RC2 KHK-206ENST00000490823 1396 ntTSL 518.06■□□□□ 0.487e-7■□□□□ 10.8
LARP4Q71RC2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.27e-7■□□□□ 10.8
LARP4Q71RC2 KHK-204ENST00000464371 1042 ntTSL 1 (best)15.87■□□□□ 0.137e-7■□□□□ 10.8
LARP4Q71RC2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.057e-7■□□□□ 10.8
LARP4Q71RC2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.772e-8■□□□□ 10.8
LARP4Q71RC2 AMN-202ENST00000541086 2269 ntTSL 222.69■■□□□ 1.222e-8■□□□□ 10.8
LARP4Q71RC2 AMN-203ENST00000558590 2772 ntTSL 220.27■□□□□ 0.832e-8■□□□□ 10.8
LARP4Q71RC2 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.491e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.641e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC10.23□□□□□ -0.771e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-217ENST00000474961 974 ntTSL 29.07□□□□□ -0.961e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-215ENST00000462256 4027 ntTSL 28.74□□□□□ -1.011e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-216ENST00000462421 618 ntTSL 38.24□□□□□ -1.091e-17■□□□□ 10.7
LARP4Q71RC2 DDX39B-221ENST00000484566 857 ntTSL 57.59□□□□□ -1.191e-17■□□□□ 10.7
LARP4Q71RC2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.76■■□□□ 1.873e-8■□□□□ 10.7
LARP4Q71RC2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.813e-8■□□□□ 10.7
LARP4Q71RC2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.783e-8■□□□□ 10.7
LARP4Q71RC2 GIPC1-204ENST00000585606 2071 ntTSL 219.24■□□□□ 0.673e-8■□□□□ 10.7
LARP4Q71RC2 NDUFS8-202ENST00000432321 936 ntTSL 214.95□□□□□ -0.024e-6■□□□□ 10.7
LARP4Q71RC2 NDUFS8-203ENST00000453471 620 ntTSL 314.68□□□□□ -0.064e-6■□□□□ 10.7
LARP4Q71RC2 NDUFS8-215ENST00000532399 3072 ntTSL 213.55□□□□□ -0.244e-6■□□□□ 10.7
LARP4Q71RC2 MBD6-214ENST00000552659 530 ntTSL 311.26□□□□□ -0.619e-9■□□□□ 10.7
LARP4Q71RC2 NDUFS8-211ENST00000529645 606 ntTSL 311.03□□□□□ -0.644e-6■□□□□ 10.7
LARP4Q71RC2 CENPV-204ENST00000482983 473 ntTSL 38.26□□□□□ -1.095e-9■□□□□ 10.7
LARP4Q71RC2 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.195e-9■□□□□ 10.7
Retrieved 100 of 15,922 protein–RNA pairs in 134.3 ms