RNA–Protein interactions for RNA: ENST00000599899.5

C3-212, Transcript of complement C3, humanhuman

TSL 2

Gene C3, Length 1,992 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-212ENST00000599899 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
C3-212ENST00000599899 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
C3-212ENST00000599899 HRCP23327 699 aa14.67□□□□□ -0.06
C3-212ENST00000599899 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
C3-212ENST00000599899 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
C3-212ENST00000599899 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.08
C3-212ENST00000599899 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
C3-212ENST00000599899 CHIC1Q5VXU3 224 aa14.46□□□□□ -0.09
C3-212ENST00000599899 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
C3-212ENST00000599899 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
C3-212ENST00000599899 PPARGC1BQ86YN6 1023 aaKnown RBP14.14□□□□□ -0.15
C3-212ENST00000599899 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
C3-212ENST00000599899 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
C3-212ENST00000599899 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
C3-212ENST00000599899 LOC105371045A0A1W2PR82 267 aa13.95□□□□□ -0.18
C3-212ENST00000599899 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
C3-212ENST00000599899 ABCC9O60706 1549 aa13.88□□□□□ -0.19
C3-212ENST00000599899 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
C3-212ENST00000599899 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
C3-212ENST00000599899 RB1CC1Q8TDY2 1594 aa13.67□□□□□ -0.22
C3-212ENST00000599899 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
C3-212ENST00000599899 SCRIBQ14160 1630 aa13.54□□□□□ -0.24
C3-212ENST00000599899 MYT1Q01538 1121 aa13.52□□□□□ -0.25
C3-212ENST00000599899 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
C3-212ENST00000599899 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
C3-212ENST00000599899 CENPBP07199 599 aaPredicted RBP13.4□□□□□ -0.26
C3-212ENST00000599899 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
C3-212ENST00000599899 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
C3-212ENST00000599899 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
C3-212ENST00000599899 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
C3-212ENST00000599899 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
C3-212ENST00000599899 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
C3-212ENST00000599899 NACADO15069 1562 aa13.32□□□□□ -0.28
C3-212ENST00000599899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
C3-212ENST00000599899 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
C3-212ENST00000599899 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
C3-212ENST00000599899 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
C3-212ENST00000599899 WIZO95785 1651 aa13.26□□□□□ -0.29
C3-212ENST00000599899 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
C3-212ENST00000599899 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
C3-212ENST00000599899 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
C3-212ENST00000599899 EEA1Q15075 1411 aa13.18□□□□□ -0.3
C3-212ENST00000599899 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
C3-212ENST00000599899 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
C3-212ENST00000599899 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
C3-212ENST00000599899 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
C3-212ENST00000599899 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
C3-212ENST00000599899 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
C3-212ENST00000599899 SOGA1O94964 1423 aa13.01□□□□□ -0.33
C3-212ENST00000599899 SMARCA4P51532 1647 aa13.01□□□□□ -0.33
C3-212ENST00000599899 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
C3-212ENST00000599899 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
C3-212ENST00000599899 TTBK1Q5TCY1 1321 aaPredicted RBP12.95□□□□□ -0.34
C3-212ENST00000599899 KIF21BO75037 1637 aa12.95□□□□□ -0.34
C3-212ENST00000599899 MIER1Q8N108 512 aa12.95□□□□□ -0.34
C3-212ENST00000599899 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
C3-212ENST00000599899 YTHDC1Q96MU7 727 aaKnown RBP12.94□□□□□ -0.34
C3-212ENST00000599899 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
C3-212ENST00000599899 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
C3-212ENST00000599899 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
C3-212ENST00000599899 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
C3-212ENST00000599899 CLIP1P30622 1438 aa12.86□□□□□ -0.35
C3-212ENST00000599899 AEBP2Q6ZN18 517 aaPredicted RBP12.86□□□□□ -0.35
C3-212ENST00000599899 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.35
C3-212ENST00000599899 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
C3-212ENST00000599899 APLP2Q06481 763 aa12.79□□□□□ -0.36
C3-212ENST00000599899 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
C3-212ENST00000599899 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
C3-212ENST00000599899 DHX57Q6P158 1386 aaKnown RBP12.74□□□□□ -0.37
C3-212ENST00000599899 SUPT16HQ9Y5B9 1047 aaKnown RBP12.74□□□□□ -0.37
C3-212ENST00000599899 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.38
C3-212ENST00000599899 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
C3-212ENST00000599899 CUX2O14529 1486 aa12.68□□□□□ -0.38
C3-212ENST00000599899 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
C3-212ENST00000599899 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
C3-212ENST00000599899 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
C3-212ENST00000599899 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
C3-212ENST00000599899 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
C3-212ENST00000599899 BIVM-ERCC5R4GMW8 1640 aa12.61□□□□□ -0.39
C3-212ENST00000599899 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
C3-212ENST00000599899 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
C3-212ENST00000599899 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
C3-212ENST00000599899 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
C3-212ENST00000599899 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
C3-212ENST00000599899 MAP3K1Q13233 1512 aa12.49□□□□□ -0.41
C3-212ENST00000599899 MAPKBP1O60336 1514 aa12.48□□□□□ -0.41
C3-212ENST00000599899 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
C3-212ENST00000599899 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
C3-212ENST00000599899 RAB3GAP2Q9H2M9 1393 aa12.45□□□□□ -0.42
C3-212ENST00000599899 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
C3-212ENST00000599899 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
C3-212ENST00000599899 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
C3-212ENST00000599899 NEFLP07196 543 aa12.42□□□□□ -0.42
C3-212ENST00000599899 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
C3-212ENST00000599899 CCER2I3L3R5 266 aa12.41□□□□□ -0.42
C3-212ENST00000599899 TIAM1Q13009 1591 aa12.41□□□□□ -0.42
C3-212ENST00000599899 FKBP8Q14318 412 aa12.41□□□□□ -0.42
C3-212ENST00000599899 CUX1P39880 1505 aa12.4□□□□□ -0.42
C3-212ENST00000599899 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
C3-212ENST00000599899 KCNH8Q96L42 1107 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms