RNA–Protein interactions for RNA: ENST00000558590.1

AMN-203, Transcript of amnion associated transmembrane protein, humanhuman

TSL 2

Gene AMN, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMN-203ENST00000558590 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
AMN-203ENST00000558590 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
AMN-203ENST00000558590 SUPT5HO00267 1087 aaKnown RBP34.94■■■■□ 3.18
AMN-203ENST00000558590 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
AMN-203ENST00000558590 ZCCHC6Q5VYS8 1495 aaKnown RBP34.24■■■■□ 3.07
AMN-203ENST00000558590 CCDC180Q9P1Z9 1646 aa33.95■■■■□ 3.03
AMN-203ENST00000558590 HRCP23327 699 aa33.82■■■■□ 3
AMN-203ENST00000558590 CHIC1Q5VXU3 224 aa33.77■■■■□ 3
AMN-203ENST00000558590 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
AMN-203ENST00000558590 PCGF6Q9BYE7 350 aa33.62■■■□□ 2.97
AMN-203ENST00000558590 PPARGC1BQ86YN6 1023 aaKnown RBP33.39■■■□□ 2.94
AMN-203ENST00000558590 LOC105371045A0A1W2PR82 267 aa33.1■■■□□ 2.89
AMN-203ENST00000558590 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
AMN-203ENST00000558590 TRIM26Q12899 539 aaPredicted RBP32.5■■■□□ 2.79
AMN-203ENST00000558590 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
AMN-203ENST00000558590 EHMT2Q96KQ7 1210 aa32.44■■■□□ 2.78
AMN-203ENST00000558590 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
AMN-203ENST00000558590 ABCC9O60706 1549 aa32.34■■■□□ 2.77
AMN-203ENST00000558590 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
AMN-203ENST00000558590 TRIM41Q8WV44 630 aa32.27■■■□□ 2.76
AMN-203ENST00000558590 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
AMN-203ENST00000558590 ZEB1P37275 1124 aaPredicted RBP31.94■■■□□ 2.7
AMN-203ENST00000558590 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.7
AMN-203ENST00000558590 SCAF1Q9H7N4 1312 aaKnown RBP31.75■■■□□ 2.67
AMN-203ENST00000558590 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
AMN-203ENST00000558590 PELP1Q8IZL8 1130 aaKnown RBP31.6■■■□□ 2.65
AMN-203ENST00000558590 WIZO95785 1651 aa31.55■■■□□ 2.64
AMN-203ENST00000558590 NACADO15069 1562 aa31.47■■■□□ 2.63
AMN-203ENST00000558590 TTBK1Q5TCY1 1321 aaPredicted RBP31.4■■■□□ 2.62
AMN-203ENST00000558590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.38■■■□□ 2.61
AMN-203ENST00000558590 CCER1Q8TC90 406 aaPredicted RBP31.25■■■□□ 2.59
AMN-203ENST00000558590 NEUROD1Q13562 356 aa31.13■■■□□ 2.57
AMN-203ENST00000558590 ACIN1Q9UKV3 1341 aaKnown RBP31.1■■■□□ 2.57
AMN-203ENST00000558590 ABCC8Q09428 1581 aa31.09■■■□□ 2.57
AMN-203ENST00000558590 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
AMN-203ENST00000558590 CCDC88BA6NC98 1476 aa30.99■■■□□ 2.55
AMN-203ENST00000558590 DIEXFQ68CQ4 756 aaKnown RBP30.96■■■□□ 2.55
AMN-203ENST00000558590 GTF3C3Q9Y5Q9 886 aa30.92■■■□□ 2.54
AMN-203ENST00000558590 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
AMN-203ENST00000558590 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.545e-8■■■■□ 23.3
AMN-203ENST00000558590 SOGA1O94964 1423 aa30.87■■■□□ 2.53
AMN-203ENST00000558590 UBTFP17480 764 aaKnown RBP30.81■■■□□ 2.52
AMN-203ENST00000558590 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
AMN-203ENST00000558590 CENPBP07199 599 aaPredicted RBP30.78■■■□□ 2.52
AMN-203ENST00000558590 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
AMN-203ENST00000558590 RUSC2Q8N2Y8 1516 aa30.75■■■□□ 2.51
AMN-203ENST00000558590 SMARCA2P51531 1590 aa30.73■■■□□ 2.51
AMN-203ENST00000558590 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
AMN-203ENST00000558590 CSRNP3Q8WYN3 585 aa30.65■■■□□ 2.5
AMN-203ENST00000558590 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
AMN-203ENST00000558590 YTHDC1Q96MU7 727 aaKnown RBP30.59■■■□□ 2.49
AMN-203ENST00000558590 RANGAP1P46060 587 aaPredicted RBP30.55■■■□□ 2.48
AMN-203ENST00000558590 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
AMN-203ENST00000558590 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
AMN-203ENST00000558590 ZNF316A6NFI3 1004 aaPredicted RBP30.44■■■□□ 2.46
AMN-203ENST00000558590 HNRNPUL2Q1KMD3 747 aaKnown RBP30.41■■■□□ 2.46
AMN-203ENST00000558590 GOLGA3Q08378 1498 aa30.29■■■□□ 2.44
AMN-203ENST00000558590 EEA1Q15075 1411 aa30.26■■■□□ 2.43
AMN-203ENST00000558590 MIER1Q8N108 512 aa30.26■■■□□ 2.43
AMN-203ENST00000558590 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
AMN-203ENST00000558590 MYT1Q01538 1121 aa30.22■■■□□ 2.43
AMN-203ENST00000558590 SYNJ1O43426 1573 aa30.18■■■□□ 2.42
AMN-203ENST00000558590 CLIP1P30622 1438 aa30.1■■■□□ 2.41
AMN-203ENST00000558590 APLP2Q06481 763 aa30.06■■■□□ 2.4
AMN-203ENST00000558590 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
AMN-203ENST00000558590 RAPGEF2Q9Y4G8 1499 aa30.02■■■□□ 2.4
AMN-203ENST00000558590 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
AMN-203ENST00000558590 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
AMN-203ENST00000558590 PEG3Q9GZU2 1588 aa29.91■■■□□ 2.38
AMN-203ENST00000558590 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
AMN-203ENST00000558590 KIF21BO75037 1637 aa29.87■■■□□ 2.37
AMN-203ENST00000558590 KANK4Q5T7N3 995 aaPredicted RBP29.71■■■□□ 2.35
AMN-203ENST00000558590 ITGAEP38570 1179 aa29.64■■■□□ 2.33
AMN-203ENST00000558590 TOP2BQ02880 1626 aa29.6■■■□□ 2.33
AMN-203ENST00000558590 ARAP1Q96P48 1450 aa29.51■■■□□ 2.31
AMN-203ENST00000558590 SUPT16HQ9Y5B9 1047 aaKnown RBP29.5■■■□□ 2.31
AMN-203ENST00000558590 PRXQ9BXM0 1461 aa29.46■■■□□ 2.31
AMN-203ENST00000558590 DHX57Q6P158 1386 aaKnown RBP29.45■■■□□ 2.31
AMN-203ENST00000558590 CUX1P39880 1505 aa29.43■■■□□ 2.3
AMN-203ENST00000558590 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
AMN-203ENST00000558590 KIF27Q86VH2 1401 aa29.34■■■□□ 2.29
AMN-203ENST00000558590 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
AMN-203ENST00000558590 CLSPNQ9HAW4 1339 aa29.27■■■□□ 2.28
AMN-203ENST00000558590 KCNH8Q96L42 1107 aa29.27■■■□□ 2.28
AMN-203ENST00000558590 P3H3Q8IVL6 736 aa29.24■■■□□ 2.27
AMN-203ENST00000558590 ATP1B4Q9UN42 357 aaPredicted RBP29.24■■■□□ 2.27
AMN-203ENST00000558590 NCAPD3P42695 1498 aa29.24■■■□□ 2.27
AMN-203ENST00000558590 ARHGAP35Q9NRY4 1499 aa29.23■■■□□ 2.27
AMN-203ENST00000558590 TSHZ2Q9NRE2 1034 aa29.21■■■□□ 2.27
AMN-203ENST00000558590 CCNB3Q8WWL7 1395 aa29.19■■■□□ 2.26
AMN-203ENST00000558590 BCANQ96GW7 911 aa29.18■■■□□ 2.26
AMN-203ENST00000558590 CUX2O14529 1486 aa29.15■■■□□ 2.26
AMN-203ENST00000558590 RRBP1Q9P2E9 1410 aaKnown RBP29.15■■■□□ 2.26
AMN-203ENST00000558590 CFTRP13569 1480 aa29.14■■■□□ 2.26
AMN-203ENST00000558590 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
AMN-203ENST00000558590 FAM50AQ14320 339 aaKnown RBP29.1■■■□□ 2.25
AMN-203ENST00000558590 IGF1RP08069 1367 aa29.09■■■□□ 2.25
AMN-203ENST00000558590 RAB3GAP2Q9H2M9 1393 aa29.05■■■□□ 2.24
AMN-203ENST00000558590 SIN3AQ96ST3 1273 aa29.02■■■□□ 2.24
AMN-203ENST00000558590 CARMIL1Q5VZK9 1371 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms