RNA–Protein interactions for RNA: ENST00000550566.6

RPL6-208, Transcript of ribosomal protein L6, humanhuman

TSL 3

Gene RPL6, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL6-208ENST00000550566 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
RPL6-208ENST00000550566 ABCC9O60706 1549 aa38.01■■■■□ 3.67
RPL6-208ENST00000550566 CCDC180Q9P1Z9 1646 aa37.83■■■■□ 3.65
RPL6-208ENST00000550566 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
RPL6-208ENST00000550566 NACADO15069 1562 aa35.85■■■■□ 3.33
RPL6-208ENST00000550566 DCAF8L2P0C7V8 631 aa35.84■■■■□ 3.33
RPL6-208ENST00000550566 DNAJC5BQ9UF47 199 aa35.61■■■■□ 3.29
RPL6-208ENST00000550566 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
RPL6-208ENST00000550566 MYO15BQ96JP2 1530 aa35.28■■■■□ 3.24
RPL6-208ENST00000550566 UNC13AQ9UPW8 1703 aa35.07■■■■□ 3.2
RPL6-208ENST00000550566 BICRAQ9NZM4 1560 aa34.91■■■■□ 3.18
RPL6-208ENST00000550566 ZCCHC6Q5VYS8 1495 aaKnown RBP34.87■■■■□ 3.17
RPL6-208ENST00000550566 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
RPL6-208ENST00000550566 SHROOM4Q9ULL8 1493 aa34.64■■■■□ 3.14
RPL6-208ENST00000550566 SCRIBQ14160 1630 aa34.49■■■■□ 3.11
RPL6-208ENST00000550566 CECR2Q9BXF3 1484 aa34.28■■■■□ 3.08
RPL6-208ENST00000550566 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
RPL6-208ENST00000550566 EIF4G1Q04637 1599 aaKnown RBP34.18■■■■□ 3.06
RPL6-208ENST00000550566 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
RPL6-208ENST00000550566 ERCC6Q03468 1493 aa32.96■■■□□ 2.87
RPL6-208ENST00000550566 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
RPL6-208ENST00000550566 DNAJC5Q9H3Z4 198 aa32.93■■■□□ 2.86
RPL6-208ENST00000550566 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
RPL6-208ENST00000550566 SMARCA4P51532 1647 aa32.86■■■□□ 2.85
RPL6-208ENST00000550566 CUX2O14529 1486 aa32.85■■■□□ 2.85
RPL6-208ENST00000550566 HMGXB3Q12766 1538 aa32.82■■■□□ 2.85
RPL6-208ENST00000550566 BAZ1AQ9NRL2 1556 aaPredicted RBP32.76■■■□□ 2.84
RPL6-208ENST00000550566 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
RPL6-208ENST00000550566 NESP48681 1621 aa32.53■■■□□ 2.8
RPL6-208ENST00000550566 PEG3Q9GZU2 1588 aa32.51■■■□□ 2.79
RPL6-208ENST00000550566 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
RPL6-208ENST00000550566 LAMC3Q9Y6N6 1575 aa32.37■■■□□ 2.77
RPL6-208ENST00000550566 PDS5BQ9NTI5 1447 aa32.3■■■□□ 2.76
RPL6-208ENST00000550566 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
RPL6-208ENST00000550566 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
RPL6-208ENST00000550566 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
RPL6-208ENST00000550566 WIZO95785 1651 aa31.99■■■□□ 2.71
RPL6-208ENST00000550566 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.7
RPL6-208ENST00000550566 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
RPL6-208ENST00000550566 WDR62O43379 1518 aa31.8■■■□□ 2.68
RPL6-208ENST00000550566 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
RPL6-208ENST00000550566 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
RPL6-208ENST00000550566 CFTRP13569 1480 aa31.67■■■□□ 2.66
RPL6-208ENST00000550566 TOP2AP11388 1531 aaKnown RBP31.67■■■□□ 2.66
RPL6-208ENST00000550566 TRIM41Q8WV44 630 aa31.57■■■□□ 2.64
RPL6-208ENST00000550566 URB2Q14146 1524 aaKnown RBP31.41■■■□□ 2.62
RPL6-208ENST00000550566 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
RPL6-208ENST00000550566 CCDC88BA6NC98 1476 aa31.29■■■□□ 2.6
RPL6-208ENST00000550566 PRDM2Q13029 1718 aa31.26■■■□□ 2.59
RPL6-208ENST00000550566 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
RPL6-208ENST00000550566 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
RPL6-208ENST00000550566 TOPBP1Q92547 1522 aa31.09■■■□□ 2.57
RPL6-208ENST00000550566 ZNF608Q9ULD9 1512 aaPredicted RBP31.04■■■□□ 2.56
RPL6-208ENST00000550566 DNMBPQ6XZF7 1577 aa30.98■■■□□ 2.55
RPL6-208ENST00000550566 EIF4G3O43432 1585 aaKnown RBP30.88■■■□□ 2.53
RPL6-208ENST00000550566 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
RPL6-208ENST00000550566 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
RPL6-208ENST00000550566 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
RPL6-208ENST00000550566 FBLN2P98095 1184 aa30.8■■■□□ 2.52
RPL6-208ENST00000550566 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.523e-10■■■■■ 27.2
RPL6-208ENST00000550566 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
RPL6-208ENST00000550566 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.52
RPL6-208ENST00000550566 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
RPL6-208ENST00000550566 SOGA1O94964 1423 aa30.7■■■□□ 2.5
RPL6-208ENST00000550566 CYB5RLQ6IPT4 315 aa30.66■■■□□ 2.5
RPL6-208ENST00000550566 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
RPL6-208ENST00000550566 CHD1O14646 1710 aa30.62■■■□□ 2.49
RPL6-208ENST00000550566 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
RPL6-208ENST00000550566 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
RPL6-208ENST00000550566 WDR97A6NE52 1622 aa30.55■■■□□ 2.48
RPL6-208ENST00000550566 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
RPL6-208ENST00000550566 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.48
RPL6-208ENST00000550566 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
RPL6-208ENST00000550566 CUX1P39880 1505 aa30.47■■■□□ 2.47
RPL6-208ENST00000550566 MAGI1Q96QZ7 1491 aaPredicted RBP30.45■■■□□ 2.47
RPL6-208ENST00000550566 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
RPL6-208ENST00000550566 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
RPL6-208ENST00000550566 SUPT5HO00267 1087 aaKnown RBP30.41■■■□□ 2.46
RPL6-208ENST00000550566 SYNJ1O43426 1573 aa30.4■■■□□ 2.46
RPL6-208ENST00000550566 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
RPL6-208ENST00000550566 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
RPL6-208ENST00000550566 CLASP1Q7Z460 1538 aa30.29■■■□□ 2.44
RPL6-208ENST00000550566 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
RPL6-208ENST00000550566 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
RPL6-208ENST00000550566 WRNQ14191 1432 aaPredicted RBP eCLIP30.16■■■□□ 2.42
RPL6-208ENST00000550566 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
RPL6-208ENST00000550566 GRIN2AQ12879 1464 aa30.01■■■□□ 2.4
RPL6-208ENST00000550566 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
RPL6-208ENST00000550566 BIVM-ERCC5R4GMW8 1640 aa29.94■■■□□ 2.38
RPL6-208ENST00000550566 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
RPL6-208ENST00000550566 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
RPL6-208ENST00000550566 NUP160Q12769 1436 aa29.88■■■□□ 2.37
RPL6-208ENST00000550566 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
RPL6-208ENST00000550566 CEP170Q5SW79 1584 aa29.83■■■□□ 2.37
RPL6-208ENST00000550566 ERCC6L2Q5T890 1561 aa29.76■■■□□ 2.35
RPL6-208ENST00000550566 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
RPL6-208ENST00000550566 SHROOM2Q13796 1616 aa29.69■■■□□ 2.34
RPL6-208ENST00000550566 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
RPL6-208ENST00000550566 JPH4Q96JJ6 628 aa29.67■■■□□ 2.34
RPL6-208ENST00000550566 NPM1P06748 294 aaKnown RBP eCLIP29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms