RNA–Protein interactions for RNA: ENST00000601475.1

C3-216, Transcript of complement C3, humanhuman

TSL 2

Gene C3, Length 368 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-216ENST00000601475 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
C3-216ENST00000601475 ABCC9O60706 1549 aa20.37■□□□□ 0.85
C3-216ENST00000601475 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
C3-216ENST00000601475 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
C3-216ENST00000601475 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
C3-216ENST00000601475 NACADO15069 1562 aa19.19■□□□□ 0.66
C3-216ENST00000601475 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
C3-216ENST00000601475 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
C3-216ENST00000601475 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
C3-216ENST00000601475 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
C3-216ENST00000601475 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
C3-216ENST00000601475 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
C3-216ENST00000601475 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
C3-216ENST00000601475 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
C3-216ENST00000601475 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
C3-216ENST00000601475 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
C3-216ENST00000601475 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
C3-216ENST00000601475 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
C3-216ENST00000601475 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
C3-216ENST00000601475 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
C3-216ENST00000601475 CUX2O14529 1486 aa17.69■□□□□ 0.42
C3-216ENST00000601475 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
C3-216ENST00000601475 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
C3-216ENST00000601475 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
C3-216ENST00000601475 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
C3-216ENST00000601475 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
C3-216ENST00000601475 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
C3-216ENST00000601475 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
C3-216ENST00000601475 NESP48681 1621 aa17.44■□□□□ 0.38
C3-216ENST00000601475 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
C3-216ENST00000601475 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
C3-216ENST00000601475 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
C3-216ENST00000601475 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
C3-216ENST00000601475 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
C3-216ENST00000601475 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
C3-216ENST00000601475 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
C3-216ENST00000601475 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
C3-216ENST00000601475 WDR62O43379 1518 aa17.05■□□□□ 0.32
C3-216ENST00000601475 WIZO95785 1651 aa17.04■□□□□ 0.32
C3-216ENST00000601475 TRIM41Q8WV44 630 aa17■□□□□ 0.31
C3-216ENST00000601475 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
C3-216ENST00000601475 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
C3-216ENST00000601475 CFTRP13569 1480 aa16.94■□□□□ 0.3
C3-216ENST00000601475 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
C3-216ENST00000601475 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
C3-216ENST00000601475 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
C3-216ENST00000601475 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
C3-216ENST00000601475 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
C3-216ENST00000601475 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
C3-216ENST00000601475 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
C3-216ENST00000601475 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
C3-216ENST00000601475 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
C3-216ENST00000601475 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
C3-216ENST00000601475 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
C3-216ENST00000601475 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
C3-216ENST00000601475 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
C3-216ENST00000601475 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
C3-216ENST00000601475 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
C3-216ENST00000601475 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
C3-216ENST00000601475 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
C3-216ENST00000601475 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
C3-216ENST00000601475 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
C3-216ENST00000601475 FBLN2P98095 1184 aa16.43■□□□□ 0.22
C3-216ENST00000601475 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
C3-216ENST00000601475 CHD1O14646 1710 aa16.4■□□□□ 0.22
C3-216ENST00000601475 SOGA1O94964 1423 aa16.39■□□□□ 0.21
C3-216ENST00000601475 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
C3-216ENST00000601475 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
C3-216ENST00000601475 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
C3-216ENST00000601475 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
C3-216ENST00000601475 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
C3-216ENST00000601475 CHMP7Q8WUX9 453 aaPredicted RBP16.31■□□□□ 0.2
C3-216ENST00000601475 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
C3-216ENST00000601475 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
C3-216ENST00000601475 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
C3-216ENST00000601475 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
C3-216ENST00000601475 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
C3-216ENST00000601475 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
C3-216ENST00000601475 CUX1P39880 1505 aa16.24■□□□□ 0.19
C3-216ENST00000601475 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
C3-216ENST00000601475 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
C3-216ENST00000601475 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
C3-216ENST00000601475 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
C3-216ENST00000601475 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
C3-216ENST00000601475 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
C3-216ENST00000601475 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
C3-216ENST00000601475 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
C3-216ENST00000601475 SUPT5HO00267 1087 aaKnown RBP16.01■□□□□ 0.15
C3-216ENST00000601475 NUP160Q12769 1436 aa16■□□□□ 0.15
C3-216ENST00000601475 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
C3-216ENST00000601475 ADAMTS12P58397 1594 aa15.96■□□□□ 0.14
C3-216ENST00000601475 CEP170Q5SW79 1584 aa15.95■□□□□ 0.14
C3-216ENST00000601475 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
C3-216ENST00000601475 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
C3-216ENST00000601475 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
C3-216ENST00000601475 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
C3-216ENST00000601475 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
C3-216ENST00000601475 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
C3-216ENST00000601475 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
C3-216ENST00000601475 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms