RNA–Protein interactions for RNA: ENST00000553909.1

AL163636.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL163636.2, Length 1,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL163636.2-201ENST00000553909 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
AL163636.2-201ENST00000553909 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
AL163636.2-201ENST00000553909 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
AL163636.2-201ENST00000553909 ABCC9O60706 1549 aa31.43■■■□□ 2.62
AL163636.2-201ENST00000553909 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
AL163636.2-201ENST00000553909 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.53
AL163636.2-201ENST00000553909 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
AL163636.2-201ENST00000553909 NACADO15069 1562 aa30.75■■■□□ 2.51
AL163636.2-201ENST00000553909 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
AL163636.2-201ENST00000553909 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
AL163636.2-201ENST00000553909 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
AL163636.2-201ENST00000553909 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
AL163636.2-201ENST00000553909 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.35
AL163636.2-201ENST00000553909 PABPN1Q86U42 306 aaKnown RBP eCLIP29.51■■■□□ 2.31
AL163636.2-201ENST00000553909 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
AL163636.2-201ENST00000553909 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
AL163636.2-201ENST00000553909 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
AL163636.2-201ENST00000553909 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
AL163636.2-201ENST00000553909 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
AL163636.2-201ENST00000553909 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
AL163636.2-201ENST00000553909 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
AL163636.2-201ENST00000553909 WIZO95785 1651 aa28.66■■■□□ 2.18
AL163636.2-201ENST00000553909 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
AL163636.2-201ENST00000553909 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
AL163636.2-201ENST00000553909 SMARCA2P51531 1590 aa28.51■■■□□ 2.15
AL163636.2-201ENST00000553909 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
AL163636.2-201ENST00000553909 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
AL163636.2-201ENST00000553909 NCAPD3P42695 1498 aa28.39■■■□□ 2.13
AL163636.2-201ENST00000553909 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
AL163636.2-201ENST00000553909 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
AL163636.2-201ENST00000553909 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
AL163636.2-201ENST00000553909 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
AL163636.2-201ENST00000553909 CFTRP13569 1480 aa27.63■■■□□ 2.01
AL163636.2-201ENST00000553909 CADPSQ9ULU8 1353 aa27.59■■■□□ 2.01
AL163636.2-201ENST00000553909 NESP48681 1621 aa27.49■■□□□ 1.99
AL163636.2-201ENST00000553909 LAMC3Q9Y6N6 1575 aa27.47■■□□□ 1.99
AL163636.2-201ENST00000553909 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
AL163636.2-201ENST00000553909 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
AL163636.2-201ENST00000553909 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
AL163636.2-201ENST00000553909 FANCD2Q9BXW9 1451 aa27.29■■□□□ 1.96
AL163636.2-201ENST00000553909 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
AL163636.2-201ENST00000553909 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
AL163636.2-201ENST00000553909 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
AL163636.2-201ENST00000553909 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
AL163636.2-201ENST00000553909 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
AL163636.2-201ENST00000553909 CUX1P39880 1505 aa27.11■■□□□ 1.93
AL163636.2-201ENST00000553909 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
AL163636.2-201ENST00000553909 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
AL163636.2-201ENST00000553909 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
AL163636.2-201ENST00000553909 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
AL163636.2-201ENST00000553909 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
AL163636.2-201ENST00000553909 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
AL163636.2-201ENST00000553909 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
AL163636.2-201ENST00000553909 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.91
AL163636.2-201ENST00000553909 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
AL163636.2-201ENST00000553909 WDR62O43379 1518 aa26.86■■□□□ 1.89
AL163636.2-201ENST00000553909 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
AL163636.2-201ENST00000553909 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
AL163636.2-201ENST00000553909 SOGA1O94964 1423 aa26.71■■□□□ 1.87
AL163636.2-201ENST00000553909 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
AL163636.2-201ENST00000553909 CUX2O14529 1486 aa26.67■■□□□ 1.86
AL163636.2-201ENST00000553909 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
AL163636.2-201ENST00000553909 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
AL163636.2-201ENST00000553909 TARBP1Q13395 1621 aaKnown RBP26.62■■□□□ 1.85
AL163636.2-201ENST00000553909 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
AL163636.2-201ENST00000553909 EEA1Q15075 1411 aa26.59■■□□□ 1.85
AL163636.2-201ENST00000553909 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
AL163636.2-201ENST00000553909 FAM9AQ8IZU1 332 aaPredicted RBP26.55■■□□□ 1.84
AL163636.2-201ENST00000553909 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
AL163636.2-201ENST00000553909 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
AL163636.2-201ENST00000553909 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
AL163636.2-201ENST00000553909 CSRNP3Q8WYN3 585 aa26.42■■□□□ 1.82
AL163636.2-201ENST00000553909 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
AL163636.2-201ENST00000553909 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
AL163636.2-201ENST00000553909 IGF1RP08069 1367 aa26.37■■□□□ 1.81
AL163636.2-201ENST00000553909 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.811e-9■■■■■ 35.1
AL163636.2-201ENST00000553909 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
AL163636.2-201ENST00000553909 PRXQ9BXM0 1461 aa26.31■■□□□ 1.8
AL163636.2-201ENST00000553909 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
AL163636.2-201ENST00000553909 KIF21BO75037 1637 aa26.3■■□□□ 1.8
AL163636.2-201ENST00000553909 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
AL163636.2-201ENST00000553909 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
AL163636.2-201ENST00000553909 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
AL163636.2-201ENST00000553909 CUL7Q14999 1698 aa26.22■■□□□ 1.79
AL163636.2-201ENST00000553909 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.79
AL163636.2-201ENST00000553909 GOLGA3Q08378 1498 aa26.2■■□□□ 1.78
AL163636.2-201ENST00000553909 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
AL163636.2-201ENST00000553909 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
AL163636.2-201ENST00000553909 EHMT2Q96KQ7 1210 aa26.15■■□□□ 1.78
AL163636.2-201ENST00000553909 SNAPC4Q5SXM2 1469 aa26.13■■□□□ 1.77
AL163636.2-201ENST00000553909 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
AL163636.2-201ENST00000553909 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
AL163636.2-201ENST00000553909 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
AL163636.2-201ENST00000553909 TNIKQ9UKE5 1360 aa26.03■■□□□ 1.76
AL163636.2-201ENST00000553909 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
AL163636.2-201ENST00000553909 UBTFP17480 764 aaKnown RBP25.98■■□□□ 1.75
AL163636.2-201ENST00000553909 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
AL163636.2-201ENST00000553909 CEP162Q5TB80 1403 aa25.86■■□□□ 1.73
AL163636.2-201ENST00000553909 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
AL163636.2-201ENST00000553909 CHMP7Q8WUX9 453 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms