RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
DDX39B-221ENST00000484566 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
DDX39B-221ENST00000484566 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
DDX39B-221ENST00000484566 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
DDX39B-221ENST00000484566 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
DDX39B-221ENST00000484566 ABCC9O60706 1549 aa20.34■□□□□ 0.85
DDX39B-221ENST00000484566 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
DDX39B-221ENST00000484566 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
DDX39B-221ENST00000484566 FOXD1Q16676 465 aa20.21■□□□□ 0.83
DDX39B-221ENST00000484566 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
DDX39B-221ENST00000484566 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
DDX39B-221ENST00000484566 ADRA2BP18089 450 aa19.35■□□□□ 0.69
DDX39B-221ENST00000484566 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
DDX39B-221ENST00000484566 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
DDX39B-221ENST00000484566 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
DDX39B-221ENST00000484566 MSH5O43196 834 aa18.81■□□□□ 0.6
DDX39B-221ENST00000484566 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.593e-19■■□□□ 11.8
DDX39B-221ENST00000484566 NACADO15069 1562 aa18.68■□□□□ 0.58
DDX39B-221ENST00000484566 UNC13AQ9UPW8 1703 aa18.5■□□□□ 0.55
DDX39B-221ENST00000484566 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
DDX39B-221ENST00000484566 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.54
DDX39B-221ENST00000484566 BICRAQ9NZM4 1560 aa18.37■□□□□ 0.53
DDX39B-221ENST00000484566 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
DDX39B-221ENST00000484566 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
DDX39B-221ENST00000484566 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
DDX39B-221ENST00000484566 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
DDX39B-221ENST00000484566 CUX2O14529 1486 aa18.05■□□□□ 0.48
DDX39B-221ENST00000484566 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
DDX39B-221ENST00000484566 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
DDX39B-221ENST00000484566 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
DDX39B-221ENST00000484566 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
DDX39B-221ENST00000484566 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
DDX39B-221ENST00000484566 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
DDX39B-221ENST00000484566 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
DDX39B-221ENST00000484566 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
DDX39B-221ENST00000484566 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
DDX39B-221ENST00000484566 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
DDX39B-221ENST00000484566 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
DDX39B-221ENST00000484566 KCNA4P22459 653 aa17.24■□□□□ 0.35
DDX39B-221ENST00000484566 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
DDX39B-221ENST00000484566 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
DDX39B-221ENST00000484566 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
DDX39B-221ENST00000484566 NESP48681 1621 aa17.14■□□□□ 0.33
DDX39B-221ENST00000484566 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
DDX39B-221ENST00000484566 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
DDX39B-221ENST00000484566 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
DDX39B-221ENST00000484566 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
DDX39B-221ENST00000484566 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
DDX39B-221ENST00000484566 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
DDX39B-221ENST00000484566 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
DDX39B-221ENST00000484566 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
DDX39B-221ENST00000484566 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
DDX39B-221ENST00000484566 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
DDX39B-221ENST00000484566 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
DDX39B-221ENST00000484566 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
DDX39B-221ENST00000484566 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
DDX39B-221ENST00000484566 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
DDX39B-221ENST00000484566 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
DDX39B-221ENST00000484566 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
DDX39B-221ENST00000484566 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
DDX39B-221ENST00000484566 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
DDX39B-221ENST00000484566 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.28
DDX39B-221ENST00000484566 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
DDX39B-221ENST00000484566 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
DDX39B-221ENST00000484566 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
DDX39B-221ENST00000484566 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
DDX39B-221ENST00000484566 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
DDX39B-221ENST00000484566 WDR62O43379 1518 aa16.68■□□□□ 0.26
DDX39B-221ENST00000484566 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
DDX39B-221ENST00000484566 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
DDX39B-221ENST00000484566 WIZO95785 1651 aa16.51■□□□□ 0.23
DDX39B-221ENST00000484566 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
DDX39B-221ENST00000484566 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
DDX39B-221ENST00000484566 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
DDX39B-221ENST00000484566 CFTRP13569 1480 aa16.42■□□□□ 0.22
DDX39B-221ENST00000484566 URB2Q14146 1524 aaKnown RBP16.37■□□□□ 0.21
DDX39B-221ENST00000484566 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
DDX39B-221ENST00000484566 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
DDX39B-221ENST00000484566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.29e-16■■□□□ 13.3
DDX39B-221ENST00000484566 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
DDX39B-221ENST00000484566 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
DDX39B-221ENST00000484566 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
DDX39B-221ENST00000484566 CHD1O14646 1710 aa16.19■□□□□ 0.18
DDX39B-221ENST00000484566 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
DDX39B-221ENST00000484566 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
DDX39B-221ENST00000484566 KDM4FA0A1W2PPD8 638 aa16.14■□□□□ 0.17
DDX39B-221ENST00000484566 ABCC8Q09428 1581 aa16.12■□□□□ 0.17
DDX39B-221ENST00000484566 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
DDX39B-221ENST00000484566 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
DDX39B-221ENST00000484566 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
DDX39B-221ENST00000484566 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
DDX39B-221ENST00000484566 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.156e-15■■■■■ 28
DDX39B-221ENST00000484566 FBLN2P98095 1184 aa16.01■□□□□ 0.15
DDX39B-221ENST00000484566 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
DDX39B-221ENST00000484566 FBXO41Q8TF61 875 aa16■□□□□ 0.15
DDX39B-221ENST00000484566 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
DDX39B-221ENST00000484566 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
DDX39B-221ENST00000484566 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
DDX39B-221ENST00000484566 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
DDX39B-221ENST00000484566 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms