RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
DDX39B-214ENST00000458640 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
DDX39B-214ENST00000458640 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
DDX39B-214ENST00000458640 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
DDX39B-214ENST00000458640 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
DDX39B-214ENST00000458640 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
DDX39B-214ENST00000458640 ABCC9O60706 1549 aa19.57■□□□□ 0.72
DDX39B-214ENST00000458640 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
DDX39B-214ENST00000458640 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
DDX39B-214ENST00000458640 MYT1Q01538 1121 aa19.44■□□□□ 0.7
DDX39B-214ENST00000458640 NACADO15069 1562 aa19.41■□□□□ 0.7
DDX39B-214ENST00000458640 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
DDX39B-214ENST00000458640 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
DDX39B-214ENST00000458640 HRCP23327 699 aa19.03■□□□□ 0.64
DDX39B-214ENST00000458640 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
DDX39B-214ENST00000458640 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
DDX39B-214ENST00000458640 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
DDX39B-214ENST00000458640 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
DDX39B-214ENST00000458640 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
DDX39B-214ENST00000458640 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
DDX39B-214ENST00000458640 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
DDX39B-214ENST00000458640 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
DDX39B-214ENST00000458640 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.543e-19■■□□□ 11.8
DDX39B-214ENST00000458640 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
DDX39B-214ENST00000458640 WIZO95785 1651 aa18.3■□□□□ 0.52
DDX39B-214ENST00000458640 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
DDX39B-214ENST00000458640 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
DDX39B-214ENST00000458640 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
DDX39B-214ENST00000458640 PPARGC1BQ86YN6 1023 aaKnown RBP18.12■□□□□ 0.49
DDX39B-214ENST00000458640 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
DDX39B-214ENST00000458640 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
DDX39B-214ENST00000458640 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
DDX39B-214ENST00000458640 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
DDX39B-214ENST00000458640 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
DDX39B-214ENST00000458640 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
DDX39B-214ENST00000458640 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
DDX39B-214ENST00000458640 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
DDX39B-214ENST00000458640 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
DDX39B-214ENST00000458640 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
DDX39B-214ENST00000458640 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
DDX39B-214ENST00000458640 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
DDX39B-214ENST00000458640 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
DDX39B-214ENST00000458640 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
DDX39B-214ENST00000458640 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
DDX39B-214ENST00000458640 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
DDX39B-214ENST00000458640 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
DDX39B-214ENST00000458640 CFTRP13569 1480 aa17.49■□□□□ 0.39
DDX39B-214ENST00000458640 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
DDX39B-214ENST00000458640 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
DDX39B-214ENST00000458640 GTF3C3Q9Y5Q9 886 aa17.44■□□□□ 0.38
DDX39B-214ENST00000458640 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
DDX39B-214ENST00000458640 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
DDX39B-214ENST00000458640 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
DDX39B-214ENST00000458640 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
DDX39B-214ENST00000458640 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
DDX39B-214ENST00000458640 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
DDX39B-214ENST00000458640 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
DDX39B-214ENST00000458640 EEA1Q15075 1411 aa17.32■□□□□ 0.36
DDX39B-214ENST00000458640 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
DDX39B-214ENST00000458640 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
DDX39B-214ENST00000458640 PRKCSHP14314 528 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-214ENST00000458640 CUX1P39880 1505 aa17.23■□□□□ 0.35
DDX39B-214ENST00000458640 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
DDX39B-214ENST00000458640 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
DDX39B-214ENST00000458640 SOGA1O94964 1423 aa17.2■□□□□ 0.34
DDX39B-214ENST00000458640 NESP48681 1621 aa17.18■□□□□ 0.34
DDX39B-214ENST00000458640 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
DDX39B-214ENST00000458640 CEP164Q9UPV0 1460 aa17.14■□□□□ 0.34
DDX39B-214ENST00000458640 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
DDX39B-214ENST00000458640 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
DDX39B-214ENST00000458640 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
DDX39B-214ENST00000458640 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
DDX39B-214ENST00000458640 KIF21BO75037 1637 aa17.08■□□□□ 0.32
DDX39B-214ENST00000458640 APLP2Q06481 763 aa17.07■□□□□ 0.32
DDX39B-214ENST00000458640 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
DDX39B-214ENST00000458640 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
DDX39B-214ENST00000458640 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
DDX39B-214ENST00000458640 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
DDX39B-214ENST00000458640 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
DDX39B-214ENST00000458640 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
DDX39B-214ENST00000458640 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
DDX39B-214ENST00000458640 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
DDX39B-214ENST00000458640 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
DDX39B-214ENST00000458640 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
DDX39B-214ENST00000458640 POLA1P09884 1462 aaPredicted RBP16.96■□□□□ 0.31
DDX39B-214ENST00000458640 CUX2O14529 1486 aa16.96■□□□□ 0.31
DDX39B-214ENST00000458640 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.3
DDX39B-214ENST00000458640 ABCA10Q8WWZ4 1543 aa16.92■□□□□ 0.3
DDX39B-214ENST00000458640 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
DDX39B-214ENST00000458640 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
DDX39B-214ENST00000458640 PRXQ9BXM0 1461 aa16.91■□□□□ 0.3
DDX39B-214ENST00000458640 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
DDX39B-214ENST00000458640 CEP162Q5TB80 1403 aa16.89■□□□□ 0.29
DDX39B-214ENST00000458640 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
DDX39B-214ENST00000458640 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
DDX39B-214ENST00000458640 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
DDX39B-214ENST00000458640 WDR62O43379 1518 aa16.83■□□□□ 0.29
DDX39B-214ENST00000458640 CUL7Q14999 1698 aa16.81■□□□□ 0.28
DDX39B-214ENST00000458640 IGF1RP08069 1367 aa16.8■□□□□ 0.28
DDX39B-214ENST00000458640 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms