RNA–Protein interactions for RNA: ENST00000375882.6

CSNK2B-203, Transcript of casein kinase 2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2B, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-203ENST00000375882 NISCHQ9Y2I1 1504 aa41.19■■■■■ 4.18
CSNK2B-203ENST00000375882 ABCC9O60706 1549 aa37.84■■■■□ 3.65
CSNK2B-203ENST00000375882 CCDC180Q9P1Z9 1646 aa37.02■■■■□ 3.52
CSNK2B-203ENST00000375882 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
CSNK2B-203ENST00000375882 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
CSNK2B-203ENST00000375882 NACADO15069 1562 aa35.28■■■■□ 3.24
CSNK2B-203ENST00000375882 PABPN1Q86U42 306 aaKnown RBP eCLIP35.26■■■■□ 3.24
CSNK2B-203ENST00000375882 DCAF8L2P0C7V8 631 aa35.16■■■■□ 3.22
CSNK2B-203ENST00000375882 BICRAQ9NZM4 1560 aa34.69■■■■□ 3.14
CSNK2B-203ENST00000375882 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
CSNK2B-203ENST00000375882 MYO15BQ96JP2 1530 aa34.64■■■■□ 3.14
CSNK2B-203ENST00000375882 CECR2Q9BXF3 1484 aa34.16■■■■□ 3.06
CSNK2B-203ENST00000375882 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
CSNK2B-203ENST00000375882 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
CSNK2B-203ENST00000375882 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
CSNK2B-203ENST00000375882 DCAF1Q9Y4B6 1507 aa33.95■■■■□ 3.03
CSNK2B-203ENST00000375882 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
CSNK2B-203ENST00000375882 SCRIBQ14160 1630 aa33.78■■■■□ 3
CSNK2B-203ENST00000375882 DNAJC5Q9H3Z4 198 aa33.69■■■□□ 2.98
CSNK2B-203ENST00000375882 CUX2O14529 1486 aa32.83■■■□□ 2.85
CSNK2B-203ENST00000375882 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
CSNK2B-203ENST00000375882 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
CSNK2B-203ENST00000375882 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
CSNK2B-203ENST00000375882 NESP48681 1621 aa32.34■■■□□ 2.77
CSNK2B-203ENST00000375882 HMGXB3Q12766 1538 aa32.26■■■□□ 2.76
CSNK2B-203ENST00000375882 SMARCA2P51531 1590 aa32.26■■■□□ 2.75
CSNK2B-203ENST00000375882 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
CSNK2B-203ENST00000375882 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
CSNK2B-203ENST00000375882 THOC2Q8NI27 1593 aaKnown RBP32.01■■■□□ 2.71
CSNK2B-203ENST00000375882 BAZ1AQ9NRL2 1556 aaPredicted RBP31.95■■■□□ 2.71
CSNK2B-203ENST00000375882 LAMC3Q9Y6N6 1575 aa31.91■■■□□ 2.7
CSNK2B-203ENST00000375882 PEG3Q9GZU2 1588 aa31.9■■■□□ 2.7
CSNK2B-203ENST00000375882 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
CSNK2B-203ENST00000375882 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
CSNK2B-203ENST00000375882 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
CSNK2B-203ENST00000375882 KIF21AQ7Z4S6 1674 aa31.7■■■□□ 2.66
CSNK2B-203ENST00000375882 CADPSQ9ULU8 1353 aa31.69■■■□□ 2.66
CSNK2B-203ENST00000375882 MRC2Q9UBG0 1479 aa31.58■■■□□ 2.65
CSNK2B-203ENST00000375882 WDR62O43379 1518 aa31.49■■■□□ 2.63
CSNK2B-203ENST00000375882 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
CSNK2B-203ENST00000375882 CEP164Q9UPV0 1460 aa31.31■■■□□ 2.6
CSNK2B-203ENST00000375882 FANCD2Q9BXW9 1451 aa31.27■■■□□ 2.6
CSNK2B-203ENST00000375882 WIZO95785 1651 aa31.23■■■□□ 2.59
CSNK2B-203ENST00000375882 CFTRP13569 1480 aa31.16■■■□□ 2.58
CSNK2B-203ENST00000375882 URB2Q14146 1524 aaKnown RBP31.05■■■□□ 2.56
CSNK2B-203ENST00000375882 RSF1Q96T23 1441 aaPredicted RBP30.92■■■□□ 2.54
CSNK2B-203ENST00000375882 RIMBP3CA6NJZ7 1639 aa30.82■■■□□ 2.52
CSNK2B-203ENST00000375882 RIMBP3BA6NNM3 1639 aa30.82■■■□□ 2.52
CSNK2B-203ENST00000375882 RIMBP3Q9UFD9 1639 aa30.82■■■□□ 2.52
CSNK2B-203ENST00000375882 TOP2AP11388 1531 aaKnown RBP30.82■■■□□ 2.52
CSNK2B-203ENST00000375882 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
CSNK2B-203ENST00000375882 IFT140Q96RY7 1462 aa30.74■■■□□ 2.51
CSNK2B-203ENST00000375882 ARHGEF11O15085 1522 aa30.73■■■□□ 2.51
CSNK2B-203ENST00000375882 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
CSNK2B-203ENST00000375882 TOPBP1Q92547 1522 aa30.58■■■□□ 2.49
CSNK2B-203ENST00000375882 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
CSNK2B-203ENST00000375882 TRHP20396 242 aaPredicted RBP30.5■■■□□ 2.47
CSNK2B-203ENST00000375882 AQRO60306 1485 aaKnown RBP eCLIP30.47■■■□□ 2.473e-8■■■■□ 24.7
CSNK2B-203ENST00000375882 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
CSNK2B-203ENST00000375882 EIF4G3O43432 1585 aaKnown RBP30.43■■■□□ 2.46
CSNK2B-203ENST00000375882 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
CSNK2B-203ENST00000375882 ARAP1Q96P48 1450 aa30.42■■■□□ 2.46
CSNK2B-203ENST00000375882 FBLN2P98095 1184 aa30.41■■■□□ 2.46
CSNK2B-203ENST00000375882 DNMBPQ6XZF7 1577 aa30.36■■■□□ 2.45
CSNK2B-203ENST00000375882 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
CSNK2B-203ENST00000375882 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
CSNK2B-203ENST00000375882 CHD1O14646 1710 aa30.24■■■□□ 2.43
CSNK2B-203ENST00000375882 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
CSNK2B-203ENST00000375882 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
CSNK2B-203ENST00000375882 SOGA1O94964 1423 aa30.16■■■□□ 2.42
CSNK2B-203ENST00000375882 CHMP7Q8WUX9 453 aaPredicted RBP30.09■■■□□ 2.41
CSNK2B-203ENST00000375882 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
CSNK2B-203ENST00000375882 CLASP1Q7Z460 1538 aa30.04■■■□□ 2.4
CSNK2B-203ENST00000375882 AEBP2Q6ZN18 517 aaPredicted RBP30.03■■■□□ 2.4
CSNK2B-203ENST00000375882 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
CSNK2B-203ENST00000375882 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
CSNK2B-203ENST00000375882 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
CSNK2B-203ENST00000375882 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
CSNK2B-203ENST00000375882 WDR97A6NE52 1622 aa29.89■■■□□ 2.37
CSNK2B-203ENST00000375882 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
CSNK2B-203ENST00000375882 CUX1P39880 1505 aa29.83■■■□□ 2.37
CSNK2B-203ENST00000375882 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
CSNK2B-203ENST00000375882 ABCA10Q8WWZ4 1543 aa29.6■■■□□ 2.33
CSNK2B-203ENST00000375882 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
CSNK2B-203ENST00000375882 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
CSNK2B-203ENST00000375882 GRIN2AQ12879 1464 aa29.51■■■□□ 2.31
CSNK2B-203ENST00000375882 ABCA5Q8WWZ7 1642 aa29.5■■■□□ 2.31
CSNK2B-203ENST00000375882 NUP160Q12769 1436 aa29.47■■■□□ 2.31
CSNK2B-203ENST00000375882 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
CSNK2B-203ENST00000375882 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.29
CSNK2B-203ENST00000375882 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
CSNK2B-203ENST00000375882 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
CSNK2B-203ENST00000375882 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
CSNK2B-203ENST00000375882 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
CSNK2B-203ENST00000375882 PRG4Q92954 1404 aaPredicted RBP29.26■■■□□ 2.27
CSNK2B-203ENST00000375882 FAM69CQ0P6D2 419 aa29.21■■■□□ 2.27
CSNK2B-203ENST00000375882 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
CSNK2B-203ENST00000375882 KIF13AQ9H1H9 1805 aa29.14■■■□□ 2.26
CSNK2B-203ENST00000375882 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
CSNK2B-203ENST00000375882 SUPT5HO00267 1087 aaKnown RBP29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms